RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 HSPB8Q9UJY1 196 aa7.9□□□□□ -1.14
CHRFAM7A-206ENST00000569278 VPS13BQ7Z7G8 4022 aa7.89□□□□□ -1.15
CHRFAM7A-206ENST00000569278 C7orf71A4D174 169 aa7.89□□□□□ -1.15
CHRFAM7A-206ENST00000569278 LINC01549A6NIU2 74 aa7.89□□□□□ -1.15
CHRFAM7A-206ENST00000569278 CKS2P33552 79 aa7.89□□□□□ -1.15
CHRFAM7A-206ENST00000569278 PKIAP61925 76 aa7.89□□□□□ -1.15
CHRFAM7A-206ENST00000569278 PMCHL1Q16048 86 aa7.89□□□□□ -1.15
CHRFAM7A-206ENST00000569278 SPANXN1Q5VSR9 72 aa7.89□□□□□ -1.15
CHRFAM7A-206ENST00000569278 PRSS3P2Q8NHM4 247 aa7.89□□□□□ -1.15
CHRFAM7A-206ENST00000569278 MRAP2Q96G30 205 aa7.89□□□□□ -1.15
CHRFAM7A-206ENST00000569278 TPPP3Q9BW30 176 aa7.89□□□□□ -1.15
CHRFAM7A-206ENST00000569278 NXT2Q9NPJ8 142 aaKnown RBP7.89□□□□□ -1.15
CHRFAM7A-206ENST00000569278 TMSB15BA0A087X1C1 80 aa7.88□□□□□ -1.15
CHRFAM7A-206ENST00000569278 TSTD3H0UI37 97 aa7.88□□□□□ -1.15
CHRFAM7A-206ENST00000569278 NUPR1O60356 82 aa7.88□□□□□ -1.15
CHRFAM7A-206ENST00000569278 SCGB1D1O95968 90 aa7.88□□□□□ -1.15
CHRFAM7A-206ENST00000569278 HLA-DRB4P13762 266 aa7.88□□□□□ -1.15
CHRFAM7A-206ENST00000569278 RNASE4P34096 147 aaKnown RBP7.88□□□□□ -1.15
CHRFAM7A-206ENST00000569278 PTH2Q96A98 100 aa7.88□□□□□ -1.15
CHRFAM7A-206ENST00000569278 PRELID3AQ96N28 172 aa7.88□□□□□ -1.15
CHRFAM7A-206ENST00000569278 LINC00467Q9BRT7 94 aa7.88□□□□□ -1.15
CHRFAM7A-206ENST00000569278 DKK2Q9UBU2 259 aa7.88□□□□□ -1.15
CHRFAM7A-206ENST00000569278 NAGKQ9UJ70 344 aa7.88□□□□□ -1.15
CHRFAM7A-206ENST00000569278 PHLDA3Q9Y5J5 127 aa7.88□□□□□ -1.15
CHRFAM7A-206ENST00000569278 HLA-DRB4X5D2U9 266 aa7.88□□□□□ -1.15
CHRFAM7A-206ENST00000569278 C20orf202A1L168 122 aa7.87□□□□□ -1.15
CHRFAM7A-206ENST00000569278 LINC01546A6NGU7 62 aa7.87□□□□□ -1.15
CHRFAM7A-206ENST00000569278 M0R2Z0 102 aa7.87□□□□□ -1.15
CHRFAM7A-206ENST00000569278 CRXO43186 299 aaPredicted RBP7.87□□□□□ -1.15
CHRFAM7A-206ENST00000569278 LINC00310P59036 64 aa7.87□□□□□ -1.15
CHRFAM7A-206ENST00000569278 KIR3DS1Q14943 382 aa7.87□□□□□ -1.15
CHRFAM7A-206ENST00000569278 MRPL51Q4U2R6 128 aaKnown RBP7.87□□□□□ -1.15
CHRFAM7A-206ENST00000569278 FA2HQ7L5A8 372 aa7.87□□□□□ -1.15
CHRFAM7A-206ENST00000569278 SPATA12Q7Z6I5 190 aa7.87□□□□□ -1.15
CHRFAM7A-206ENST00000569278 GSN-AS1Q9NRJ2 163 aa7.87□□□□□ -1.15
CHRFAM7A-206ENST00000569278 TRGV11A0A075B6L2 103 aa7.86□□□□□ -1.15
CHRFAM7A-206ENST00000569278 NXPH4O95158 308 aa7.86□□□□□ -1.15
CHRFAM7A-206ENST00000569278 BTF3P20290 206 aaKnown RBP7.86□□□□□ -1.15
CHRFAM7A-206ENST00000569278 FXYD7P58549 80 aa7.86□□□□□ -1.15
CHRFAM7A-206ENST00000569278 NUTF2P61970 127 aaKnown RBP7.86□□□□□ -1.15
CHRFAM7A-206ENST00000569278 FAM222AQ5U5X8 452 aa7.86□□□□□ -1.15
CHRFAM7A-206ENST00000569278 SYT8Q8NBV8 401 aa7.86□□□□□ -1.15
CHRFAM7A-206ENST00000569278 OR10AG1Q8NH19 301 aa7.86□□□□□ -1.15
CHRFAM7A-206ENST00000569278 C20orf78Q9BR46 151 aa7.86□□□□□ -1.15
CHRFAM7A-206ENST00000569278 MAP1LC3AQ9H492 121 aa7.86□□□□□ -1.15
CHRFAM7A-206ENST00000569278 C11orf21Q9P2W6 132 aa7.86□□□□□ -1.15
CHRFAM7A-206ENST00000569278 M0R381 172 aa7.85□□□□□ -1.15
CHRFAM7A-206ENST00000569278 LEPROTL1O95214 131 aa7.85□□□□□ -1.15
CHRFAM7A-206ENST00000569278 EMP1P54849 157 aa7.85□□□□□ -1.15
CHRFAM7A-206ENST00000569278 ANXA2RQ3ZCQ2 193 aa7.85□□□□□ -1.15
CHRFAM7A-206ENST00000569278 RNASEKQ6P5S7 137 aaKnown RBP7.85□□□□□ -1.15
CHRFAM7A-206ENST00000569278 PET117Q6UWS5 81 aa7.85□□□□□ -1.15
CHRFAM7A-206ENST00000569278 AMN1Q8IY45 258 aa7.85□□□□□ -1.15
CHRFAM7A-206ENST00000569278 C1orf158Q8N1D5 194 aa7.85□□□□□ -1.15
CHRFAM7A-206ENST00000569278 DPH3P1Q9H4G8 78 aa7.85□□□□□ -1.15
CHRFAM7A-206ENST00000569278 IGHV1OR15-1A0A075B7D0 117 aa7.84□□□□□ -1.15
CHRFAM7A-206ENST00000569278 D6R8Y8 96 aa7.84□□□□□ -1.15
CHRFAM7A-206ENST00000569278 TCAPO15273 167 aa7.84□□□□□ -1.15
CHRFAM7A-206ENST00000569278 SPART-AS1P0CW21 52 aa7.84□□□□□ -1.15
CHRFAM7A-206ENST00000569278 SMIM17P0DL12 118 aa7.84□□□□□ -1.15
CHRFAM7A-206ENST00000569278 RPL32P62910 135 aaKnown RBP7.84□□□□□ -1.15
CHRFAM7A-206ENST00000569278 TMEM70Q9BUB7 260 aa7.84□□□□□ -1.15
CHRFAM7A-206ENST00000569278 C1QTNF4Q9BXJ3 329 aa7.84□□□□□ -1.15
CHRFAM7A-206ENST00000569278 MAP1LC3CQ9BXW4 147 aa7.84□□□□□ -1.15
CHRFAM7A-206ENST00000569278 F6UB75 175 aa7.83□□□□□ -1.16
CHRFAM7A-206ENST00000569278 CDK2AP2O75956 126 aa7.83□□□□□ -1.16
CHRFAM7A-206ENST00000569278 IGKV3-20P01619 116 aa7.83□□□□□ -1.16
CHRFAM7A-206ENST00000569278 PRM2P04554 102 aa7.83□□□□□ -1.16
CHRFAM7A-206ENST00000569278 C1orf134Q5TEV5 83 aa7.83□□□□□ -1.16
CHRFAM7A-206ENST00000569278 AMTNQ6UX39 209 aa7.83□□□□□ -1.16
CHRFAM7A-206ENST00000569278 TEX43Q6ZNM6 134 aa7.83□□□□□ -1.16
CHRFAM7A-206ENST00000569278 Q8N8P6 123 aa7.83□□□□□ -1.16
CHRFAM7A-206ENST00000569278 RNF185Q96GF1 192 aa7.83□□□□□ -1.16
CHRFAM7A-206ENST00000569278 AP1S3Q96PC3 154 aa7.83□□□□□ -1.16
CHRFAM7A-206ENST00000569278 DNAH8Q96JB1 4490 aa7.83□□□□□ -1.16
CHRFAM7A-206ENST00000569278 IGHV3OR16-12A0A075B7B8 117 aa7.82□□□□□ -1.16
CHRFAM7A-206ENST00000569278 SMIM9A6NGZ8 99 aa7.82□□□□□ -1.16
CHRFAM7A-206ENST00000569278 TNFRSF6BO95407 300 aa7.82□□□□□ -1.16
CHRFAM7A-206ENST00000569278 RNASE3P12724 160 aaKnown RBP7.82□□□□□ -1.16
CHRFAM7A-206ENST00000569278 UBE2DNLQ8IWF7 75 aa7.82□□□□□ -1.16
CHRFAM7A-206ENST00000569278 SPXQ9BT56 116 aa7.82□□□□□ -1.16
CHRFAM7A-206ENST00000569278 PLAC8L1A1L4L8 177 aa7.81□□□□□ -1.16
CHRFAM7A-206ENST00000569278 C16orf90A8MZG2 172 aa7.81□□□□□ -1.16
CHRFAM7A-206ENST00000569278 H3BVH4 76 aa7.81□□□□□ -1.16
CHRFAM7A-206ENST00000569278 C3orf79P0CE67 100 aa7.81□□□□□ -1.16
CHRFAM7A-206ENST00000569278 HTN3P15516 51 aa7.81□□□□□ -1.16
CHRFAM7A-206ENST00000569278 EVI2AP22794 236 aa7.81□□□□□ -1.16
CHRFAM7A-206ENST00000569278 KRTDAPP60985 99 aa7.81□□□□□ -1.16
CHRFAM7A-206ENST00000569278 LBHQ53QV2 105 aaPredicted RBP7.81□□□□□ -1.16
CHRFAM7A-206ENST00000569278 PRR9Q5T870 116 aa7.81□□□□□ -1.16
CHRFAM7A-206ENST00000569278 MRPL52Q86TS9 123 aaKnown RBP7.81□□□□□ -1.16
CHRFAM7A-206ENST00000569278 MAPKAPK5-AS1Q8N8E1 139 aa7.81□□□□□ -1.16
CHRFAM7A-206ENST00000569278 ZNRF2Q8NHG8 242 aa7.81□□□□□ -1.16
CHRFAM7A-206ENST00000569278 URB1-AS1Q96HZ7 61 aa7.81□□□□□ -1.16
CHRFAM7A-206ENST00000569278 C9orf85Q96MD7 179 aa7.81□□□□□ -1.16
CHRFAM7A-206ENST00000569278 TRAV12-3A0A0B4J271 114 aa7.8□□□□□ -1.16
CHRFAM7A-206ENST00000569278 IGHV3-16A0A0C4DH30 117 aa7.8□□□□□ -1.16
CHRFAM7A-206ENST00000569278 IGHV1-24A0A0C4DH33 117 aa7.8□□□□□ -1.16
CHRFAM7A-206ENST00000569278 GNRH2O43555 120 aa7.8□□□□□ -1.16
CHRFAM7A-206ENST00000569278 HBDP02042 147 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms