RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 TOR2AQ5JU69 321 aa13.38□□□□□ -0.27
ABCA3-206ENST00000569062 NUDT10Q8NFP7 164 aa13.38□□□□□ -0.27
ABCA3-206ENST00000569062 NUDT11Q96G61 164 aa13.38□□□□□ -0.27
ABCA3-206ENST00000569062 BIN3Q9NQY0 253 aa13.38□□□□□ -0.27
ABCA3-206ENST00000569062 KLK12Q9UKR0 248 aa13.38□□□□□ -0.27
ABCA3-206ENST00000569062 IGLV5-52A0A0A0MRZ9 124 aa13.37□□□□□ -0.27
ABCA3-206ENST00000569062 TRBV6-8A0A0A6YYG3 113 aa13.37□□□□□ -0.27
ABCA3-206ENST00000569062 XKRY2A2RUG3 117 aa13.37□□□□□ -0.27
ABCA3-206ENST00000569062 K7EN84 100 aa13.37□□□□□ -0.27
ABCA3-206ENST00000569062 GCSHP23434 173 aa13.37□□□□□ -0.27
ABCA3-206ENST00000569062 XGP55808 180 aa13.37□□□□□ -0.27
ABCA3-206ENST00000569062 LYZL1Q6UWQ5 148 aa13.37□□□□□ -0.27
ABCA3-206ENST00000569062 OCC1Q8TAD7 63 aa13.37□□□□□ -0.27
ABCA3-206ENST00000569062 A0A087WX48 190 aa13.36□□□□□ -0.27
ABCA3-206ENST00000569062 MGPP08493 103 aa13.36□□□□□ -0.27
ABCA3-206ENST00000569062 CACNG7P62955 275 aa13.36□□□□□ -0.27
ABCA3-206ENST00000569062 LYPD6BQ8NI32 183 aa13.36□□□□□ -0.27
ABCA3-206ENST00000569062 RNASE7Q9H1E1 156 aaKnown RBP13.36□□□□□ -0.27
ABCA3-206ENST00000569062 F2Z2F3 143 aa13.35□□□□□ -0.27
ABCA3-206ENST00000569062 NTN5Q8WTR8 489 aaPredicted RBP13.35□□□□□ -0.27
ABCA3-206ENST00000569062 CHCHD7Q9BUK0 85 aa13.35□□□□□ -0.27
ABCA3-206ENST00000569062 TMEM262E9PQX1 116 aa13.34□□□□□ -0.27
ABCA3-206ENST00000569062 LECT2O14960 151 aa13.34□□□□□ -0.27
ABCA3-206ENST00000569062 NTM-AS1Q6ZSK4 140 aa13.34□□□□□ -0.27
ABCA3-206ENST00000569062 M0QY20 66 aa13.33□□□□□ -0.28
ABCA3-206ENST00000569062 NTF3P20783 257 aa13.33□□□□□ -0.28
ABCA3-206ENST00000569062 SUMO4Q6EEV6 95 aa13.33□□□□□ -0.28
ABCA3-206ENST00000569062 KCNIP4Q6PIL6 250 aa13.33□□□□□ -0.28
ABCA3-206ENST00000569062 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.33□□□□□ -0.28
ABCA3-206ENST00000569062 UBE2WQ96B02 151 aa13.33□□□□□ -0.28
ABCA3-206ENST00000569062 IGKV2D-24A0A075B6R9 120 aa13.32□□□□□ -0.28
ABCA3-206ENST00000569062 TMEM250H0YL14 139 aa13.32□□□□□ -0.28
ABCA3-206ENST00000569062 ELOBQ15370 118 aa13.32□□□□□ -0.28
ABCA3-206ENST00000569062 MPV17L2Q567V2 206 aa13.32□□□□□ -0.28
ABCA3-206ENST00000569062 BAALCQ8WXS3 180 aa13.32□□□□□ -0.28
ABCA3-206ENST00000569062 RPP21Q9H633 154 aaKnown RBP13.32□□□□□ -0.28
ABCA3-206ENST00000569062 TRGC1P0CF51 173 aa13.31□□□□□ -0.28
ABCA3-206ENST00000569062 CTRLP40313 264 aa13.31□□□□□ -0.28
ABCA3-206ENST00000569062 RMI2Q96E14 147 aa13.31□□□□□ -0.28
ABCA3-206ENST00000569062 CHCHD5Q9BSY4 110 aa13.31□□□□□ -0.28
ABCA3-206ENST00000569062 COX11Q9Y6N1 276 aa13.31□□□□□ -0.28
ABCA3-206ENST00000569062 CEBPGP53567 150 aa13.3□□□□□ -0.28
ABCA3-206ENST00000569062 DPH3P1Q9H4G8 78 aa13.3□□□□□ -0.28
ABCA3-206ENST00000569062 H7C1H1 209 aa13.29□□□□□ -0.28
ABCA3-206ENST00000569062 TMEM97Q5BJF2 176 aa13.29□□□□□ -0.28
ABCA3-206ENST00000569062 WDR73Q6P4I2 378 aa13.29□□□□□ -0.28
ABCA3-206ENST00000569062 ENHOQ6UWT2 76 aa13.29□□□□□ -0.28
ABCA3-206ENST00000569062 C15orf54Q8N8G6 183 aa13.29□□□□□ -0.28
ABCA3-206ENST00000569062 CNFNQ9BYD5 112 aa13.29□□□□□ -0.28
ABCA3-206ENST00000569062 DNAH8Q96JB1 4490 aa13.29□□□□□ -0.28
ABCA3-206ENST00000569062 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.28□□□□□ -0.28
ABCA3-206ENST00000569062 HAMPP81172 84 aa13.28□□□□□ -0.28
ABCA3-206ENST00000569062 TWIST1Q15672 202 aa13.28□□□□□ -0.28
ABCA3-206ENST00000569062 ATRAIDQ6UW56 229 aa13.28□□□□□ -0.28
ABCA3-206ENST00000569062 Q8N976 141 aa13.28□□□□□ -0.28
ABCA3-206ENST00000569062 GTSF1Q8WW33 167 aa13.28□□□□□ -0.28
ABCA3-206ENST00000569062 EIF5A2Q9GZV4 153 aaKnown RBP13.28□□□□□ -0.28
ABCA3-206ENST00000569062 ANGP03950 147 aaKnown RBP13.27□□□□□ -0.29
ABCA3-206ENST00000569062 Q0VG73 95 aa13.27□□□□□ -0.29
ABCA3-206ENST00000569062 RASL11AQ6T310 242 aa13.27□□□□□ -0.29
ABCA3-206ENST00000569062 FAT1Q14517 4588 aa13.27□□□□□ -0.29
ABCA3-206ENST00000569062 TRBV25-1A0A075B6N4 114 aa13.26□□□□□ -0.29
ABCA3-206ENST00000569062 GATCO43716 136 aaKnown RBP13.26□□□□□ -0.29
ABCA3-206ENST00000569062 GAGE6Q13070 117 aa13.26□□□□□ -0.29
ABCA3-206ENST00000569062 FAM210AQ96ND0 272 aa13.26□□□□□ -0.29
ABCA3-206ENST00000569062 EPM2AB3EWF7 344 aa13.25□□□□□ -0.29
ABCA3-206ENST00000569062 CRPP02741 224 aa13.25□□□□□ -0.29
ABCA3-206ENST00000569062 IQCJQ1A5X6 159 aa13.25□□□□□ -0.29
ABCA3-206ENST00000569062 FAM231DQ6ZW35 169 aa13.25□□□□□ -0.29
ABCA3-206ENST00000569062 NIT2Q9NQR4 276 aa13.25□□□□□ -0.29
ABCA3-206ENST00000569062 FAM30AQ9NZY2 134 aa13.25□□□□□ -0.29
ABCA3-206ENST00000569062 IGHV1-24A0A0C4DH33 117 aa13.24□□□□□ -0.29
ABCA3-206ENST00000569062 SMR3BP02814 79 aaPredicted RBP13.24□□□□□ -0.29
ABCA3-206ENST00000569062 PKIAP61925 76 aa13.24□□□□□ -0.29
ABCA3-206ENST00000569062 RBX1P62877 108 aa13.24□□□□□ -0.29
ABCA3-206ENST00000569062 DEFB104AQ8WTQ1 72 aa13.24□□□□□ -0.29
ABCA3-206ENST00000569062 TMEM70Q9BUB7 260 aa13.24□□□□□ -0.29
ABCA3-206ENST00000569062 C1orf43Q9BWL3 253 aa13.24□□□□□ -0.29
ABCA3-206ENST00000569062 SMIM7Q9BQ49 75 aa13.23□□□□□ -0.29
ABCA3-206ENST00000569062 TRAV26-2A0A0B4J265 109 aa13.22□□□□□ -0.29
ABCA3-206ENST00000569062 SRP19P09132 144 aaKnown RBP13.22□□□□□ -0.29
ABCA3-206ENST00000569062 FOXA3P55318 350 aaPredicted RBP13.22□□□□□ -0.29
ABCA3-206ENST00000569062 CLPSL2Q6UWE3 100 aa13.22□□□□□ -0.29
ABCA3-206ENST00000569062 GATD1Q8NB37 220 aa13.22□□□□□ -0.29
ABCA3-206ENST00000569062 A8MWL6 223 aa13.21□□□□□ -0.29
ABCA3-206ENST00000569062 NDUFS6O75380 124 aaKnown RBP13.21□□□□□ -0.29
ABCA3-206ENST00000569062 LINC01620Q4KN68 170 aa13.21□□□□□ -0.29
ABCA3-206ENST00000569062 Q5VSD8 79 aa13.21□□□□□ -0.29
ABCA3-206ENST00000569062 LINC01551Q86U37 167 aa13.21□□□□□ -0.29
ABCA3-206ENST00000569062 LINC00269Q8N2A0 174 aa13.21□□□□□ -0.29
ABCA3-206ENST00000569062 PGLYRP4Q96LB8 373 aa13.21□□□□□ -0.29
ABCA3-206ENST00000569062 ZNF727A8MUV8 499 aa13.2□□□□□ -0.3
ABCA3-206ENST00000569062 MIAQ16674 131 aa13.2□□□□□ -0.3
ABCA3-206ENST00000569062 PRR34Q9NV39 138 aa13.2□□□□□ -0.3
ABCA3-206ENST00000569062 VPS13BQ7Z7G8 4022 aa13.19□□□□□ -0.3
ABCA3-206ENST00000569062 CT83Q5H943 113 aa13.19□□□□□ -0.3
ABCA3-206ENST00000569062 FRZBQ92765 325 aa13.19□□□□□ -0.3
ABCA3-206ENST00000569062 SMIM15Q7Z3B0 74 aa13.18□□□□□ -0.3
ABCA3-206ENST00000569062 RPL39LQ96EH5 51 aaKnown RBP13.18□□□□□ -0.3
ABCA3-206ENST00000569062 TMEM243Q9BU79 118 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms