RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 ATP6V0CP27449 155 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 ASIPP42127 132 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 GAGE5Q13069 117 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 GAGE6Q13070 117 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 LINC01556Q5JQF7 62 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 AKR1C8PQ5T2L2 129 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 LELP1Q5T871 98 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 CFAP126Q5VTH2 177 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 TMEM75Q8N9X5 138 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 SYT8Q8NBV8 401 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 STOML3Q8TAV4 291 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 NTN5Q8WTR8 489 aaPredicted RBP3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 BAALCQ8WXS3 180 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 PTH2Q96A98 100 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 TVP23CQ96ET8 276 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 AQP10Q96PS8 301 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 GTSF1LQ9H1H1 148 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 PKD1P98161 4303 aa3.15□□□□□ -1.91
HERPUD1-213ENST00000568358 A0A087WWC5 75 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 FXYD6-FXYD2A0A087WZ82 144 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 TRAV8-3A0A0A6YYJ7 113 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 CTXND1A0A1B0GTU2 59 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 IBA57-AS1B1ANH7 110 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 B4DEV8 164 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 GGTLC3B5MD39 225 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 HSBP1O75506 76 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 IGHV3-30P01768 117 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 IGHV3-33P01772 117 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 GIPP09681 153 aaPredicted RBP3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 INAFM2P0DMQ5 153 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 IGHV3-30-3P0DP02 117 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 IGHV3-30-5P0DP03 117 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 ZNF80P51504 273 aaPredicted RBP3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 UBE2G1P62253 170 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 ZNF506Q5JVG8 444 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 LINC00242Q5T6M2 205 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 ZFP2Q6ZN57 461 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 OR2T35Q8NGX2 323 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 LYPD6BQ8NI32 183 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 HIST1H2BAQ96A08 127 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 RMI2Q96E14 147 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 C9orf85Q96MD7 179 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 ZFP30Q9Y2G7 519 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 PHLDA3Q9Y5J5 127 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 COX11Q9Y6N1 276 aa3.14□□□□□ -1.91
HERPUD1-213ENST00000568358 PEX7O00628 323 aa3.13□□□□□ -1.91
HERPUD1-213ENST00000568358 IGLV2-11P01706 119 aa3.13□□□□□ -1.91
HERPUD1-213ENST00000568358 TPT1P13693 172 aaKnown RBP3.13□□□□□ -1.91
HERPUD1-213ENST00000568358 FUSP35637 526 aaKnown RBP eCLIP3.13□□□□□ -1.91
HERPUD1-213ENST00000568358 ELOBQ15370 118 aa3.13□□□□□ -1.91
HERPUD1-213ENST00000568358 FAM162BQ5T6X4 162 aa3.13□□□□□ -1.91
HERPUD1-213ENST00000568358 RPL7L1Q6DKI1 246 aaKnown RBP3.13□□□□□ -1.91
HERPUD1-213ENST00000568358 BOD1L2Q8IYS8 172 aa3.13□□□□□ -1.91
HERPUD1-213ENST00000568358 FMC1Q96HJ9 113 aa3.13□□□□□ -1.91
HERPUD1-213ENST00000568358 LINC00479Q96M42 142 aa3.13□□□□□ -1.91
HERPUD1-213ENST00000568358 FAM218AQ96MZ4 157 aa3.13□□□□□ -1.91
HERPUD1-213ENST00000568358 IL36BQ9NZH7 164 aa3.13□□□□□ -1.91
HERPUD1-213ENST00000568358 ARL2-SNX15V9GYD0 113 aa3.13□□□□□ -1.91
HERPUD1-213ENST00000568358 V9GYY9 64 aa3.13□□□□□ -1.91
HERPUD1-213ENST00000568358 A0A087WX48 190 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 IGKV3D-20A0A0C4DH25 116 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 FAM231BA6NCW3 169 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 TMEM262E9PQX1 116 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 H3BVH4 76 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 M0R036 132 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 SMR3BP02814 79 aaPredicted RBP3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 ARMS2P0C7Q2 107 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 RNASE3P12724 160 aaKnown RBP3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 KRTAP10-1P60331 282 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 RPL36AP83881 106 aaKnown RBP3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 FAM74A4Q5TZK3 123 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 Q5VSD8 79 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 DPPA3Q6W0C5 159 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 Q8N814 137 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 RPL36ALQ969Q0 106 aaKnown RBP3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 C11orf52Q96A22 123 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 C2orf48Q96LS8 159 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 TCEAL7Q9BRU2 100 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 TMEM70Q9BUB7 260 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 PARLQ9H300 379 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 PPDPFQ9H3Y8 114 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 RYR1P21817 5038 aa3.12□□□□□ -1.91
HERPUD1-213ENST00000568358 TRBV7-3A0A075B6L6 115 aa3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 IGKV2D-24A0A075B6R9 120 aa3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 GRIFINA4D1Z8 144 aa3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 MAP1LC3B2A6NCE7 125 aa3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 LRCOL1A6NCL2 159 aa3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 RBFOX3A6NFN3 312 aa3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 KRBOX1C9JBD0 128 aa3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 M0R381 172 aa3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 PPP1R2P9O14990 202 aa3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 ARPC5O15511 151 aa3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 SH2D1AO60880 128 aa3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 PFDN1O60925 122 aa3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 C1QBP02746 253 aa3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 SMIM17P0DL12 118 aa3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 AKR1C3P42330 323 aa3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 EIF5AP63241 154 aaKnown RBP3.11□□□□□ -1.91
HERPUD1-213ENST00000568358 Q0VG73 95 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms