RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 DEFB130BP0DP73 79 aa7.26□□□□□ -1.25
CDH11-214ENST00000568340 DEFB130AP0DP74 79 aa7.26□□□□□ -1.25
CDH11-214ENST00000568340 CKS2P33552 79 aa7.26□□□□□ -1.25
CDH11-214ENST00000568340 POLR2KP53803 58 aaKnown RBP7.26□□□□□ -1.25
CDH11-214ENST00000568340 RAB5BP61020 215 aa7.26□□□□□ -1.25
CDH11-214ENST00000568340 ZNF56Q15929 161 aa7.26□□□□□ -1.25
CDH11-214ENST00000568340 OR10J3Q5JRS4 329 aa7.26□□□□□ -1.25
CDH11-214ENST00000568340 SLC25A29Q8N8R3 303 aa7.26□□□□□ -1.25
CDH11-214ENST00000568340 NEXN-AS1Q8NBZ9 246 aa7.26□□□□□ -1.25
CDH11-214ENST00000568340 TRGV2A0A075B6R0 118 aa7.25□□□□□ -1.25
CDH11-214ENST00000568340 TRBV6-4A0A1B0GX49 114 aa7.25□□□□□ -1.25
CDH11-214ENST00000568340 K7EQD1 137 aa7.25□□□□□ -1.25
CDH11-214ENST00000568340 SMIM17P0DL12 118 aa7.25□□□□□ -1.25
CDH11-214ENST00000568340 ESDP10768 282 aa7.25□□□□□ -1.25
CDH11-214ENST00000568340 VSIG2Q96IQ7 327 aa7.25□□□□□ -1.25
CDH11-214ENST00000568340 C20orf78Q9BR46 151 aa7.25□□□□□ -1.25
CDH11-214ENST00000568340 TMEM70Q9BUB7 260 aa7.25□□□□□ -1.25
CDH11-214ENST00000568340 STAB2Q8WWQ8 2551 aa7.25□□□□□ -1.25
CDH11-214ENST00000568340 A0A096LNJ9 63 aa7.24□□□□□ -1.25
CDH11-214ENST00000568340 TRBV10-1A0A0K0K1A3 114 aa7.24□□□□□ -1.25
CDH11-214ENST00000568340 C5orf52A6NGY3 159 aa7.24□□□□□ -1.25
CDH11-214ENST00000568340 IFITM10A6NMD0 228 aa7.24□□□□□ -1.25
CDH11-214ENST00000568340 CRYBA4P53673 196 aa7.24□□□□□ -1.25
CDH11-214ENST00000568340 DAD1P61803 113 aa7.24□□□□□ -1.25
CDH11-214ENST00000568340 SUMO2P61956 95 aaKnown RBP7.24□□□□□ -1.25
CDH11-214ENST00000568340 Q6ZTC4 211 aa7.24□□□□□ -1.25
CDH11-214ENST00000568340 SMIM2Q9BVW6 85 aa7.24□□□□□ -1.25
CDH11-214ENST00000568340 TMA7Q9Y2S6 64 aaKnown RBP7.24□□□□□ -1.25
CDH11-214ENST00000568340 PLECQ15149 4684 aaKnown RBP7.24□□□□□ -1.25
CDH11-214ENST00000568340 STARD9Q9P2P6 4700 aa7.24□□□□□ -1.25
CDH11-214ENST00000568340 TRBV27A0A0K0K1C4 114 aa7.23□□□□□ -1.25
CDH11-214ENST00000568340 LOC100131303A0A0U1RQF7 123 aa7.23□□□□□ -1.25
CDH11-214ENST00000568340 SERF1AO75920 110 aa7.23□□□□□ -1.25
CDH11-214ENST00000568340 NHLRC4P0CG21 123 aaPredicted RBP7.23□□□□□ -1.25
CDH11-214ENST00000568340 UBE2D3P61077 147 aa7.23□□□□□ -1.25
CDH11-214ENST00000568340 UBE2D2P62837 147 aa7.23□□□□□ -1.25
CDH11-214ENST00000568340 NIT2Q9NQR4 276 aa7.23□□□□□ -1.25
CDH11-214ENST00000568340 KMT2CQ8NEZ4 4911 aaKnown RBP7.22□□□□□ -1.25
CDH11-214ENST00000568340 SDHAF1A6NFY7 115 aa7.22□□□□□ -1.25
CDH11-214ENST00000568340 ATP5G1P05496 136 aa7.22□□□□□ -1.25
CDH11-214ENST00000568340 IFI27P40305 119 aaPredicted RBP7.22□□□□□ -1.25
CDH11-214ENST00000568340 NANOS2P60321 138 aaKnown RBP7.22□□□□□ -1.25
CDH11-214ENST00000568340 RHOHQ15669 191 aa7.22□□□□□ -1.25
CDH11-214ENST00000568340 DNAJC30Q96LL9 226 aa7.22□□□□□ -1.25
CDH11-214ENST00000568340 MAP1LC3AQ9H492 121 aa7.22□□□□□ -1.25
CDH11-214ENST00000568340 ZMAT4Q9H898 229 aa7.22□□□□□ -1.25
CDH11-214ENST00000568340 F5H697 171 aa7.21□□□□□ -1.26
CDH11-214ENST00000568340 H7C1H1 209 aa7.21□□□□□ -1.26
CDH11-214ENST00000568340 PPP1R17O96001 155 aa7.21□□□□□ -1.26
CDH11-214ENST00000568340 TSHBP01222 138 aa7.21□□□□□ -1.26
CDH11-214ENST00000568340 NEGR1Q7Z3B1 354 aa7.21□□□□□ -1.26
CDH11-214ENST00000568340 HIST3H2BBQ8N257 126 aa7.21□□□□□ -1.26
CDH11-214ENST00000568340 Q8N8P6 123 aa7.21□□□□□ -1.26
CDH11-214ENST00000568340 PRO0255Q9UI72 69 aa7.21□□□□□ -1.26
CDH11-214ENST00000568340 HHLA3Q9XRX5 114 aa7.21□□□□□ -1.26
CDH11-214ENST00000568340 NIT1Q86X76 327 aa7.2□□□□□ -1.26
CDH11-214ENST00000568340 C11orf45Q8TAV5 145 aa7.2□□□□□ -1.26
CDH11-214ENST00000568340 CHCHD1Q96BP2 118 aaKnown RBP7.2□□□□□ -1.26
CDH11-214ENST00000568340 ST20Q9HBF5 79 aa7.2□□□□□ -1.26
CDH11-214ENST00000568340 DNAH1Q9P2D7 4330 aa7.19□□□□□ -1.26
CDH11-214ENST00000568340 TRBV7-3A0A075B6L6 115 aa7.19□□□□□ -1.26
CDH11-214ENST00000568340 TRGV4A0A0C4DH28 118 aa7.19□□□□□ -1.26
CDH11-214ENST00000568340 LOC389332A0A1B0GUA5 103 aa7.19□□□□□ -1.26
CDH11-214ENST00000568340 H3BNG1 76 aa7.19□□□□□ -1.26
CDH11-214ENST00000568340 NDUFA6P56556 154 aa7.19□□□□□ -1.26
CDH11-214ENST00000568340 NXT2Q9NPJ8 142 aaKnown RBP7.19□□□□□ -1.26
CDH11-214ENST00000568340 RYR3Q15413 4870 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 TRAV26-1A0A087WT03 109 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 IGHV1-24A0A0C4DH33 117 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 GAGE12JA6NER3 117 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 LINC00614P0C842 121 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 PMCHP20382 165 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 SNRPEP62304 92 aaKnown RBP7.18□□□□□ -1.26
CDH11-214ENST00000568340 GAGE1Q13065 139 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 GAGE4Q13068 117 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 GAGE5Q13069 117 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 GAGE13Q4V321 117 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 NTM-AS1Q6ZSK4 140 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 BAGE3Q86Y29 109 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 ZNRF2Q8NHG8 242 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 PACRGQ96M98 296 aaPredicted RBP7.18□□□□□ -1.26
CDH11-214ENST00000568340 CHCHD7Q9BUK0 85 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 AP5S1Q9NUS5 200 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 CSMD3Q7Z407 3707 aa7.18□□□□□ -1.26
CDH11-214ENST00000568340 VPS13DQ5THJ4 4388 aa7.17□□□□□ -1.26
CDH11-214ENST00000568340 A0A096LPF7 62 aa7.17□□□□□ -1.26
CDH11-214ENST00000568340 F5H768 121 aa7.17□□□□□ -1.26
CDH11-214ENST00000568340 K7EMI3 77 aa7.17□□□□□ -1.26
CDH11-214ENST00000568340 VCYO14598 125 aa7.17□□□□□ -1.26
CDH11-214ENST00000568340 TCAPO15273 167 aa7.17□□□□□ -1.26
CDH11-214ENST00000568340 GYPEP15421 78 aa7.17□□□□□ -1.26
CDH11-214ENST00000568340 RNASEKQ6P5S7 137 aaKnown RBP7.17□□□□□ -1.26
CDH11-214ENST00000568340 FAM104AQ969W3 186 aa7.17□□□□□ -1.26
CDH11-214ENST00000568340 HIST1H2BLQ99880 126 aa7.17□□□□□ -1.26
CDH11-214ENST00000568340 IGHV3-38A0A0C4DH36 116 aa7.16□□□□□ -1.26
CDH11-214ENST00000568340 I3L3M4 83 aa7.16□□□□□ -1.26
CDH11-214ENST00000568340 PAX4O43316 350 aa7.16□□□□□ -1.26
CDH11-214ENST00000568340 RPL36AP83881 106 aaKnown RBP7.16□□□□□ -1.26
CDH11-214ENST00000568340 PMCHL1Q16048 86 aa7.16□□□□□ -1.26
CDH11-214ENST00000568340 PDZD11Q5EBL8 140 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms