RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 C18orf65Q6ZTR6 163 aa6.69□□□□□ -1.34
HDGFL3-206ENST00000568294 DAND5Q8N907 189 aa6.69□□□□□ -1.34
HDGFL3-206ENST00000568294 DLX4Q92988 240 aaPredicted RBP6.69□□□□□ -1.34
HDGFL3-206ENST00000568294 ZNF625Q96I27 306 aaPredicted RBP6.69□□□□□ -1.34
HDGFL3-206ENST00000568294 TRAV8-3A0A0A6YYJ7 113 aa6.69□□□□□ -1.34
HDGFL3-206ENST00000568294 F8W1H4 67 aa6.69□□□□□ -1.34
HDGFL3-206ENST00000568294 SOCS3O14543 225 aa6.69□□□□□ -1.34
HDGFL3-206ENST00000568294 MRPL53Q96EL3 112 aaKnown RBP6.69□□□□□ -1.34
HDGFL3-206ENST00000568294 FN1P02751 2386 aaKnown RBP6.68□□□□□ -1.34
HDGFL3-206ENST00000568294 IGLV4-69A0A075B6H9 119 aa6.68□□□□□ -1.34
HDGFL3-206ENST00000568294 A0A1W2PRX2 142 aa6.68□□□□□ -1.34
HDGFL3-206ENST00000568294 J3QQQ9 107 aa6.68□□□□□ -1.34
HDGFL3-206ENST00000568294 VCYO14598 125 aa6.68□□□□□ -1.34
HDGFL3-206ENST00000568294 MSMBP08118 114 aa6.68□□□□□ -1.34
HDGFL3-206ENST00000568294 CD28P10747 220 aa6.68□□□□□ -1.34
HDGFL3-206ENST00000568294 SNRPD3P62318 126 aaKnown RBP6.68□□□□□ -1.34
HDGFL3-206ENST00000568294 Q6ZSV7 163 aa6.68□□□□□ -1.34
HDGFL3-206ENST00000568294 TRAV12-1A0A0B4J245 112 aa6.68□□□□□ -1.34
HDGFL3-206ENST00000568294 TCL1BO95988 128 aa6.68□□□□□ -1.34
HDGFL3-206ENST00000568294 ACANP16112 2415 aa6.67□□□□□ -1.34
HDGFL3-206ENST00000568294 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.67□□□□□ -1.34
HDGFL3-206ENST00000568294 IGKV2-29A2NJV5 120 aaPredicted RBP6.67□□□□□ -1.34
HDGFL3-206ENST00000568294 C9JAW5 83 aa6.67□□□□□ -1.34
HDGFL3-206ENST00000568294 DEFB131AP59861 70 aa6.67□□□□□ -1.34
HDGFL3-206ENST00000568294 NOTCH2Q04721 2471 aa6.67□□□□□ -1.34
HDGFL3-206ENST00000568294 A0A0J9YY99 117 aa6.67□□□□□ -1.34
HDGFL3-206ENST00000568294 IGHV3-53P01767 116 aa6.67□□□□□ -1.34
HDGFL3-206ENST00000568294 IGHG2P01859 326 aa6.67□□□□□ -1.34
HDGFL3-206ENST00000568294 PRB1P04280 392 aa6.67□□□□□ -1.34
HDGFL3-206ENST00000568294 SLURP1P55000 103 aa6.67□□□□□ -1.34
HDGFL3-206ENST00000568294 NFE4Q86UQ8 179 aa6.67□□□□□ -1.34
HDGFL3-206ENST00000568294 USMG5Q96IX5 58 aa6.67□□□□□ -1.34
HDGFL3-206ENST00000568294 VCX2Q9H322 139 aa6.67□□□□□ -1.34
HDGFL3-206ENST00000568294 DOPEY1Q5JWR5 2465 aa6.67□□□□□ -1.34
HDGFL3-206ENST00000568294 IGHV4-4A0A075B6R2 117 aa6.66□□□□□ -1.34
HDGFL3-206ENST00000568294 MT-ATP8P03928 68 aa6.66□□□□□ -1.34
HDGFL3-206ENST00000568294 CRIP2P52943 208 aaPredicted RBP6.66□□□□□ -1.34
HDGFL3-206ENST00000568294 APRG1Q8IVJ8 170 aa6.66□□□□□ -1.34
HDGFL3-206ENST00000568294 IGHV4OR15-8A0A075B7B6 117 aa6.66□□□□□ -1.34
HDGFL3-206ENST00000568294 A0A087WW49 117 aa6.66□□□□□ -1.34
HDGFL3-206ENST00000568294 IGKV3OR2-268A0A0C4DH90 116 aa6.66□□□□□ -1.34
HDGFL3-206ENST00000568294 LINC01546A6NGU7 62 aa6.66□□□□□ -1.34
HDGFL3-206ENST00000568294 SMCPP49901 116 aaPredicted RBP6.66□□□□□ -1.34
HDGFL3-206ENST00000568294 CIDEAO60543 219 aa6.66□□□□□ -1.34
HDGFL3-206ENST00000568294 NDUFA11Q86Y39 141 aa6.66□□□□□ -1.34
HDGFL3-206ENST00000568294 A6NDX4 124 aa6.65□□□□□ -1.34
HDGFL3-206ENST00000568294 SPINK8P0C7L1 97 aa6.65□□□□□ -1.34
HDGFL3-206ENST00000568294 CFC1BP0CG36 223 aa6.65□□□□□ -1.34
HDGFL3-206ENST00000568294 CFC1P0CG37 223 aa6.65□□□□□ -1.34
HDGFL3-206ENST00000568294 LINC00315P59091 139 aa6.65□□□□□ -1.34
HDGFL3-206ENST00000568294 MUSTN1Q8IVN3 82 aa6.65□□□□□ -1.34
HDGFL3-206ENST00000568294 CHD6Q8TD26 2715 aa6.65□□□□□ -1.34
HDGFL3-206ENST00000568294 IGHV1OR15-1A0A075B7D0 117 aa6.65□□□□□ -1.35
HDGFL3-206ENST00000568294 TAL2Q16559 108 aa6.65□□□□□ -1.35
HDGFL3-206ENST00000568294 C10orf105Q8TEF2 133 aa6.65□□□□□ -1.35
HDGFL3-206ENST00000568294 DCANP1Q8TF63 244 aa6.65□□□□□ -1.35
HDGFL3-206ENST00000568294 UBE2E2Q96LR5 201 aa6.65□□□□□ -1.35
HDGFL3-206ENST00000568294 IGIPA6NJ69 53 aa6.65□□□□□ -1.35
HDGFL3-206ENST00000568294 LENEPQ9Y5L5 61 aa6.65□□□□□ -1.35
HDGFL3-206ENST00000568294 NF1P21359 2839 aa6.64□□□□□ -1.35
HDGFL3-206ENST00000568294 HOXD3P31249 432 aaPredicted RBP6.64□□□□□ -1.35
HDGFL3-206ENST00000568294 CKS1BP61024 79 aa6.64□□□□□ -1.35
HDGFL3-206ENST00000568294 FOXI1Q12951 378 aa6.64□□□□□ -1.35
HDGFL3-206ENST00000568294 ANKRD29Q8N6D5 301 aa6.64□□□□□ -1.35
HDGFL3-206ENST00000568294 IGSF10Q6WRI0 2623 aa6.64□□□□□ -1.35
HDGFL3-206ENST00000568294 MXRA5Q9NR99 2828 aa6.64□□□□□ -1.35
HDGFL3-206ENST00000568294 TEX15Q9BXT5 2789 aa6.64□□□□□ -1.35
HDGFL3-206ENST00000568294 TCTEX1D4Q5JR98 221 aa6.64□□□□□ -1.35
HDGFL3-206ENST00000568294 PRO0461Q9UI25 63 aa6.64□□□□□ -1.35
HDGFL3-206ENST00000568294 TNFRSF18Q9Y5U5 241 aa6.64□□□□□ -1.35
HDGFL3-206ENST00000568294 KIF25-AS1Q9Y6Z4 181 aa6.64□□□□□ -1.35
HDGFL3-206ENST00000568294 NIPBLQ6KC79 2804 aaeCLIP6.64□□□□□ -1.35
HDGFL3-206ENST00000568294 A8MWV9 139 aa6.63□□□□□ -1.35
HDGFL3-206ENST00000568294 POLR2KP53803 58 aaKnown RBP6.63□□□□□ -1.35
HDGFL3-206ENST00000568294 FHL3Q13643 280 aa6.63□□□□□ -1.35
HDGFL3-206ENST00000568294 C1QTNF4Q9BXJ3 329 aa6.63□□□□□ -1.35
HDGFL3-206ENST00000568294 KLLNB2CW77 178 aa6.63□□□□□ -1.35
HDGFL3-206ENST00000568294 M0QY20 66 aa6.63□□□□□ -1.35
HDGFL3-206ENST00000568294 PPP1R17O96001 155 aa6.63□□□□□ -1.35
HDGFL3-206ENST00000568294 ELANEP08246 267 aa6.63□□□□□ -1.35
HDGFL3-206ENST00000568294 COX6B1P14854 86 aa6.63□□□□□ -1.35
HDGFL3-206ENST00000568294 LINC01587Q99440 93 aa6.63□□□□□ -1.35
HDGFL3-206ENST00000568294 A0A0J9YX75 114 aa6.63□□□□□ -1.35
HDGFL3-206ENST00000568294 CFAP126Q5VTH2 177 aa6.63□□□□□ -1.35
HDGFL3-206ENST00000568294 XCL2Q9UBD3 114 aa6.63□□□□□ -1.35
HDGFL3-206ENST00000568294 PRO1854Q9UHT4 67 aa6.63□□□□□ -1.35
HDGFL3-206ENST00000568294 IGHV3-30P01768 117 aa6.62□□□□□ -1.35
HDGFL3-206ENST00000568294 RBMY1A1P0DJD3 496 aaKnown RBP6.62□□□□□ -1.35
HDGFL3-206ENST00000568294 RBMY1CP0DJD4 496 aa6.62□□□□□ -1.35
HDGFL3-206ENST00000568294 IGHV3-30-5P0DP03 117 aa6.62□□□□□ -1.35
HDGFL3-206ENST00000568294 CFHR3Q02985 330 aa6.62□□□□□ -1.35
HDGFL3-206ENST00000568294 RBMY1FQ15415 496 aaKnown RBP6.62□□□□□ -1.35
HDGFL3-206ENST00000568294 DGAT2L7PQ6IED9 249 aa6.62□□□□□ -1.35
HDGFL3-206ENST00000568294 ERG28Q9UKR5 140 aa6.62□□□□□ -1.35
HDGFL3-206ENST00000568294 XGP55808 180 aa6.62□□□□□ -1.35
HDGFL3-206ENST00000568294 C19orf54Q5BKX5 351 aa6.62□□□□□ -1.35
HDGFL3-206ENST00000568294 ZNF22P17026 224 aaPredicted RBP6.61□□□□□ -1.35
HDGFL3-206ENST00000568294 C10orf126Q8N4M7 172 aa6.61□□□□□ -1.35
HDGFL3-206ENST00000568294 DYNLRB2Q8TF09 96 aa6.61□□□□□ -1.35
HDGFL3-206ENST00000568294 NTN5Q8WTR8 489 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms