RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 KRTAP10-7P60409 375 aaPredicted RBP3.94□□□□□ -1.78
CAPN3-217ENST00000567817 LAGE3Q14657 143 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 MAJINQ3KP22 176 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 TMEM97Q5BJF2 176 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 SPANXN1Q5VSR9 72 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 GTF2H5Q6ZYL4 71 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 OR2K2Q8NGT1 345 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 RNF185Q96GF1 192 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 FAM110AQ9BQ89 295 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 DAZ1Q9NQZ3 744 aaKnown RBP3.94□□□□□ -1.78
CAPN3-217ENST00000567817 MDFICQ9P1T7 246 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 HIGD1BQ9P298 99 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 TRAV12-1A0A0B4J245 112 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 IGHV7-4-1A0A0J9YVY3 117 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 USP17L23D6RBM5 183 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 H3BRM9 83 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 K7EP13 123 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 SOCS3O14543 225 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 DPM2O94777 84 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 IGKCP01834 107 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 EVI2AP22794 236 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 S100A4P26447 101 aaKnown RBP3.93□□□□□ -1.78
CAPN3-217ENST00000567817 TFPI2P48307 235 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 RPL32P62910 135 aaKnown RBP3.93□□□□□ -1.78
CAPN3-217ENST00000567817 VAMP3Q15836 100 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 TAL2Q16559 108 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 TMEM95Q3KNT9 176 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 FAM106AQ4KMX7 169 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 MPV17L2Q567V2 206 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 LINC00173Q6ZV60 143 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 GPHB5Q86YW7 130 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 OR4C5Q8NGB2 326 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 AP1S3Q96PC3 154 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 DPH3P1Q9H4G8 78 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 UFC1Q9Y3C8 167 aa3.93□□□□□ -1.78
CAPN3-217ENST00000567817 LINC01619G3V211 115 aa3.92□□□□□ -1.78
CAPN3-217ENST00000567817 H0Y8G0 127 aa3.92□□□□□ -1.78
CAPN3-217ENST00000567817 TAX1BP3O14907 124 aa3.92□□□□□ -1.78
CAPN3-217ENST00000567817 NXPH4O95158 308 aa3.92□□□□□ -1.78
CAPN3-217ENST00000567817 PRSS1P07477 247 aa3.92□□□□□ -1.78
CAPN3-217ENST00000567817 FGF6P10767 208 aa3.92□□□□□ -1.78
CAPN3-217ENST00000567817 HLA-DMBP28068 263 aa3.92□□□□□ -1.78
CAPN3-217ENST00000567817 ERCC8Q13216 396 aa3.92□□□□□ -1.78
CAPN3-217ENST00000567817 KPRPQ5T749 579 aaPredicted RBP3.92□□□□□ -1.78
CAPN3-217ENST00000567817 RNF182Q8N6D2 247 aa3.92□□□□□ -1.78
CAPN3-217ENST00000567817 POM121L12Q8N7R1 296 aa3.92□□□□□ -1.78
CAPN3-217ENST00000567817 FAM19A4Q96LR4 140 aa3.92□□□□□ -1.78
CAPN3-217ENST00000567817 PHLDA3Q9Y5J5 127 aa3.92□□□□□ -1.78
CAPN3-217ENST00000567817 TIMM8BQ9Y5J9 83 aaPredicted RBP3.92□□□□□ -1.78
CAPN3-217ENST00000567817 IGLV2-18A0A075B6J9 118 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 A0A087WX48 190 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 IGHV3-35A0A0C4DH35 117 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 IGHV3-66A0A0C4DH42 116 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 MUC21A0A0G2JKD1 596 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 MUC21A0A140T8X8 626 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 KLLNB2CW77 178 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.91□□□□□ -1.78
CAPN3-217ENST00000567817 H3BUX3 64 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 NCR2O95944 276 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 SMIM17P0DL12 118 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 SNRPD3P62318 126 aaKnown RBP3.91□□□□□ -1.78
CAPN3-217ENST00000567817 MUC21Q5SSG8 566 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 C2orf91Q6ZV80 131 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 ERASQ7Z444 233 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 TMEM219Q86XT9 240 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 ZFAND2AQ8N6M9 145 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 SMIM2Q9BVW6 85 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 RHPN1-AS1Q9BWJ2 59 aa3.91□□□□□ -1.78
CAPN3-217ENST00000567817 A0A087WW49 117 aa3.9□□□□□ -1.79
CAPN3-217ENST00000567817 F8VRH5 84 aa3.9□□□□□ -1.79
CAPN3-217ENST00000567817 SMKR1H3BMG3 65 aa3.9□□□□□ -1.79
CAPN3-217ENST00000567817 H3BVH4 76 aa3.9□□□□□ -1.79
CAPN3-217ENST00000567817 H7C1H1 209 aa3.9□□□□□ -1.79
CAPN3-217ENST00000567817 LGALS9O00182 355 aa3.9□□□□□ -1.79
CAPN3-217ENST00000567817 CCL25O15444 150 aa3.9□□□□□ -1.79
CAPN3-217ENST00000567817 DUSP14O95147 198 aaKnown RBP3.9□□□□□ -1.79
CAPN3-217ENST00000567817 NMUP48645 174 aa3.9□□□□□ -1.79
CAPN3-217ENST00000567817 FAM159AQ6UWV7 190 aa3.9□□□□□ -1.79
CAPN3-217ENST00000567817 UNQ9165/PRO28630Q6UXU0 137 aa3.9□□□□□ -1.79
CAPN3-217ENST00000567817 BRD3OSQ6XYD6 125 aa3.9□□□□□ -1.79
CAPN3-217ENST00000567817 ADAMTSL5Q6ZMM2 481 aa3.9□□□□□ -1.79
CAPN3-217ENST00000567817 OR5A1Q8NGJ0 315 aa3.9□□□□□ -1.79
CAPN3-217ENST00000567817 CITED1Q99966 193 aa3.9□□□□□ -1.79
CAPN3-217ENST00000567817 ESM1Q9NQ30 184 aa3.9□□□□□ -1.79
CAPN3-217ENST00000567817 PLXNB1O43157 2135 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 EPPK1P58107 5090 aaKnown RBP3.89□□□□□ -1.79
CAPN3-217ENST00000567817 IGHV3OR16-13A0A075B7E8 117 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 IGHV3OR16-8A0A075B7F1 116 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 IGHV3-74A0A0B4J1X5 117 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 TRAV2A0A0B4J234 112 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 K7ERU9 68 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 ZNF207O43670 478 aaKnown RBP3.89□□□□□ -1.79
CAPN3-217ENST00000567817 SMIM13P0DJ93 91 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 IGHV4-38-2P0DP08 117 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 PSMB8P28062 276 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 HERVK_113P61574 105 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 ZC2HC1BQ5TFG8 222 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 MRAPQ8TCY5 172 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 TOMM6Q96B49 74 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 TMEM141Q96I45 108 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms