RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 C18orf15Q96N68 181 aa17.26■□□□□ 0.35
LINC00543-201ENST00000567234 A0A087WX48 190 aa17.25■□□□□ 0.35
LINC00543-201ENST00000567234 K7ERJ3 54 aa17.25■□□□□ 0.35
LINC00543-201ENST00000567234 NXPH4O95158 308 aa17.25■□□□□ 0.35
LINC00543-201ENST00000567234 AGRNO00468 2067 aa17.24■□□□□ 0.35
LINC00543-201ENST00000567234 SORL1Q92673 2214 aa17.24■□□□□ 0.35
LINC00543-201ENST00000567234 TRBV7-3A0A075B6L6 115 aa17.24■□□□□ 0.35
LINC00543-201ENST00000567234 A8MTW9 85 aa17.24■□□□□ 0.35
LINC00543-201ENST00000567234 DEFB114Q30KQ6 69 aa17.24■□□□□ 0.35
LINC00543-201ENST00000567234 TMEM61Q8N0U2 210 aa17.24■□□□□ 0.35
LINC00543-201ENST00000567234 C1QTNF4Q9BXJ3 329 aa17.24■□□□□ 0.35
LINC00543-201ENST00000567234 TRAV12-3A0A0B4J271 114 aa17.24■□□□□ 0.35
LINC00543-201ENST00000567234 CD28P10747 220 aa17.24■□□□□ 0.35
LINC00543-201ENST00000567234 ETDBQ3ZM63 59 aa17.24■□□□□ 0.35
LINC00543-201ENST00000567234 AMTNQ6UX39 209 aa17.24■□□□□ 0.35
LINC00543-201ENST00000567234 IGLV2-18A0A075B6J9 118 aa17.23■□□□□ 0.35
LINC00543-201ENST00000567234 A6NJY4 79 aa17.23■□□□□ 0.35
LINC00543-201ENST00000567234 NDUFA7O95182 113 aa17.23■□□□□ 0.35
LINC00543-201ENST00000567234 DPH3P1Q9H4G8 78 aa17.23■□□□□ 0.35
LINC00543-201ENST00000567234 TRAV25A0A0B4J276 109 aa17.22■□□□□ 0.35
LINC00543-201ENST00000567234 K7EMI3 77 aa17.22■□□□□ 0.35
LINC00543-201ENST00000567234 M0R381 172 aa17.22■□□□□ 0.35
LINC00543-201ENST00000567234 CCL24O00175 119 aa17.22■□□□□ 0.35
LINC00543-201ENST00000567234 GAS8-AS1O95177 125 aa17.21■□□□□ 0.35
LINC00543-201ENST00000567234 IGKV3-20P01619 116 aa17.21■□□□□ 0.35
LINC00543-201ENST00000567234 DEFB131AP59861 70 aa17.21■□□□□ 0.35
LINC00543-201ENST00000567234 FOXI1Q12951 378 aa17.21■□□□□ 0.35
LINC00543-201ENST00000567234 GTSCR1Q86UQ5 136 aa17.21■□□□□ 0.35
LINC00543-201ENST00000567234 NRACQ8N912 160 aa17.21■□□□□ 0.35
LINC00543-201ENST00000567234 MUC4Q99102 2169 aa17.2■□□□□ 0.34
LINC00543-201ENST00000567234 HIST1H4GQ99525 98 aa17.2■□□□□ 0.34
LINC00543-201ENST00000567234 CITED2Q99967 270 aaPredicted RBP17.2■□□□□ 0.34
LINC00543-201ENST00000567234 APOMO95445 188 aa17.19■□□□□ 0.34
LINC00543-201ENST00000567234 CD7P09564 240 aa17.19■□□□□ 0.34
LINC00543-201ENST00000567234 LAGE3Q14657 143 aa17.19■□□□□ 0.34
LINC00543-201ENST00000567234 SPINK13Q1W4C9 94 aa17.19■□□□□ 0.34
LINC00543-201ENST00000567234 CRLF1O75462 422 aa17.19■□□□□ 0.34
LINC00543-201ENST00000567234 GATA1P15976 413 aaPredicted RBP17.19■□□□□ 0.34
LINC00543-201ENST00000567234 CLUHP3Q96NS8 147 aa17.19■□□□□ 0.34
LINC00543-201ENST00000567234 OR11H12B2RN74 326 aa17.18■□□□□ 0.34
LINC00543-201ENST00000567234 H3BMM0 161 aa17.18■□□□□ 0.34
LINC00543-201ENST00000567234 CRYBA4P53673 196 aa17.18■□□□□ 0.34
LINC00543-201ENST00000567234 POM121L12Q8N7R1 296 aa17.18■□□□□ 0.34
LINC00543-201ENST00000567234 OR11H2Q8NH07 326 aa17.18■□□□□ 0.34
LINC00543-201ENST00000567234 GEMIN7Q9H840 131 aaKnown RBP17.18■□□□□ 0.34
LINC00543-201ENST00000567234 TEP1Q99973 2627 aaKnown RBP17.17■□□□□ 0.34
LINC00543-201ENST00000567234 TRAV12-2A0A075B6T6 113 aa17.17■□□□□ 0.34
LINC00543-201ENST00000567234 IGHV1OR15-1A0A075B7D0 117 aa17.17■□□□□ 0.34
LINC00543-201ENST00000567234 H7C1H1 209 aa17.17■□□□□ 0.34
LINC00543-201ENST00000567234 FXYD7P58549 80 aa17.17■□□□□ 0.34
LINC00543-201ENST00000567234 C11orf44Q8N8P7 122 aa17.17■□□□□ 0.34
LINC00543-201ENST00000567234 C9orf85Q96MD7 179 aa17.17■□□□□ 0.34
LINC00543-201ENST00000567234 IGHV3-16A0A0C4DH30 117 aa17.17■□□□□ 0.34
LINC00543-201ENST00000567234 MYMXA0A1B0GTQ4 84 aa17.17■□□□□ 0.34
LINC00543-201ENST00000567234 A0A1W2PRX2 142 aa17.17■□□□□ 0.34
LINC00543-201ENST00000567234 F8VRH5 84 aa17.17■□□□□ 0.34
LINC00543-201ENST00000567234 CFAP126Q5VTH2 177 aa17.17■□□□□ 0.34
LINC00543-201ENST00000567234 SH2D6Q7Z4S9 175 aa17.17■□□□□ 0.34
LINC00543-201ENST00000567234 MRPL35Q9NZE8 188 aaKnown RBP17.17■□□□□ 0.34
LINC00543-201ENST00000567234 KNCNA6PVL3 124 aa17.16■□□□□ 0.34
LINC00543-201ENST00000567234 TCTAP57738 103 aa17.16■□□□□ 0.34
LINC00543-201ENST00000567234 C14orf178Q8N769 122 aaPredicted RBP17.16■□□□□ 0.34
LINC00543-201ENST00000567234 MAP6D1Q9H9H5 199 aa17.16■□□□□ 0.34
LINC00543-201ENST00000567234 HIST2H2BDQ6DRA6 164 aa17.15■□□□□ 0.34
LINC00543-201ENST00000567234 ZNF256Q9Y2P7 627 aaPredicted RBP17.15■□□□□ 0.34
LINC00543-201ENST00000567234 TRAV26-2A0A0B4J265 109 aa17.14■□□□□ 0.34
LINC00543-201ENST00000567234 M0QXV9 152 aa17.14■□□□□ 0.34
LINC00543-201ENST00000567234 PPP1R17O96001 155 aa17.14■□□□□ 0.34
LINC00543-201ENST00000567234 MAST4O15021 2626 aa17.14■□□□□ 0.33
LINC00543-201ENST00000567234 SPRY2O43597 315 aa17.14■□□□□ 0.33
LINC00543-201ENST00000567234 TSPAN13O95857 204 aa17.14■□□□□ 0.33
LINC00543-201ENST00000567234 MAPKAPK5-AS1Q8N8E1 139 aa17.14■□□□□ 0.33
LINC00543-201ENST00000567234 C20orf78Q9BR46 151 aa17.14■□□□□ 0.33
LINC00543-201ENST00000567234 KIF25-AS1Q9Y6Z4 181 aa17.14■□□□□ 0.33
LINC00543-201ENST00000567234 SETD2Q9BYW2 2564 aaPredicted RBP17.13■□□□□ 0.33
LINC00543-201ENST00000567234 LINC01549A6NIU2 74 aa17.13■□□□□ 0.33
LINC00543-201ENST00000567234 Q8N1Y9 231 aa17.13■□□□□ 0.33
LINC00543-201ENST00000567234 PPDPFLQ8WWR9 84 aa17.13■□□□□ 0.33
LINC00543-201ENST00000567234 TRGV11A0A075B6L2 103 aa17.12■□□□□ 0.33
LINC00543-201ENST00000567234 TRBV20-1A0A075B6N2 111 aa17.12■□□□□ 0.33
LINC00543-201ENST00000567234 TRAV26-1A0A087WT03 109 aa17.12■□□□□ 0.33
LINC00543-201ENST00000567234 PROK1P58294 105 aa17.12■□□□□ 0.33
LINC00543-201ENST00000567234 SYT8Q8NBV8 401 aa17.12■□□□□ 0.33
LINC00543-201ENST00000567234 TTTY13Q9BZ97 58 aa17.12■□□□□ 0.33
LINC00543-201ENST00000567234 CDIP1Q9H305 208 aa17.12■□□□□ 0.33
LINC00543-201ENST00000567234 TMEM262E9PQX1 116 aa17.12■□□□□ 0.33
LINC00543-201ENST00000567234 ORMDL2Q53FV1 153 aa17.12■□□□□ 0.33
LINC00543-201ENST00000567234 MORN3Q6PF18 240 aaPredicted RBP17.12■□□□□ 0.33
LINC00543-201ENST00000567234 RASL10AQ92737 203 aa17.11■□□□□ 0.33
LINC00543-201ENST00000567234 UBE2D1P51668 147 aa17.1■□□□□ 0.33
LINC00543-201ENST00000567234 LINC00315P59091 139 aa17.1■□□□□ 0.33
LINC00543-201ENST00000567234 SBSPONQ8IVN8 264 aa17.1■□□□□ 0.33
LINC00543-201ENST00000567234 NIPBLQ6KC79 2804 aaeCLIP17.1■□□□□ 0.33
LINC00543-201ENST00000567234 SPINK8P0C7L1 97 aa17.1■□□□□ 0.33
LINC00543-201ENST00000567234 SMIM2Q9BVW6 85 aa17.1■□□□□ 0.33
LINC00543-201ENST00000567234 SPANXA1Q9NS26 97 aa17.1■□□□□ 0.33
LINC00543-201ENST00000567234 MDFICQ9P1T7 246 aa17.1■□□□□ 0.33
LINC00543-201ENST00000567234 WNK1Q9H4A3 2382 aa17.1■□□□□ 0.33
LINC00543-201ENST00000567234 RBMY1BA6NDE4 496 aaKnown RBP17.09■□□□□ 0.33
LINC00543-201ENST00000567234 RBMY1EA6NEQ0 496 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms