RNA–Protein interactions for RNA: ENST00000566661.5

KLHDC4-217, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 2,232 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-217ENST00000566661 WFDC2Q14508 124 aa12.92□□□□□ -0.34
KLHDC4-217ENST00000566661 RHOHQ15669 191 aa12.92□□□□□ -0.34
KLHDC4-217ENST00000566661 C18orf65Q6ZTR6 163 aa12.92□□□□□ -0.34
KLHDC4-217ENST00000566661 UBE2E2Q96LR5 201 aa12.92□□□□□ -0.34
KLHDC4-217ENST00000566661 JPT2Q9H910 190 aa12.92□□□□□ -0.34
KLHDC4-217ENST00000566661 A0A087WWL8 130 aa12.92□□□□□ -0.34
KLHDC4-217ENST00000566661 SRSF9Q13242 221 aaKnown RBP eCLIP12.92□□□□□ -0.34
KLHDC4-217ENST00000566661 CD300EQ496F6 205 aaPredicted RBP12.92□□□□□ -0.34
KLHDC4-217ENST00000566661 ZNF876PQ49A33 203 aa12.92□□□□□ -0.34
KLHDC4-217ENST00000566661 Q8N2B8 174 aa12.92□□□□□ -0.34
KLHDC4-217ENST00000566661 PRO0461Q9UI25 63 aa12.92□□□□□ -0.34
KLHDC4-217ENST00000566661 NSUN5P1Q3KNT7 163 aa12.91□□□□□ -0.34
KLHDC4-217ENST00000566661 RNF152Q8N8N0 203 aa12.91□□□□□ -0.34
KLHDC4-217ENST00000566661 PLEKHB2Q96CS7 222 aa12.91□□□□□ -0.34
KLHDC4-217ENST00000566661 ITPR2Q14571 2701 aa12.91□□□□□ -0.34
KLHDC4-217ENST00000566661 HOXD3P31249 432 aaPredicted RBP12.9□□□□□ -0.34
KLHDC4-217ENST00000566661 PGPEP1Q9NXJ5 209 aa12.9□□□□□ -0.34
KLHDC4-217ENST00000566661 K7EQG2 157 aa12.9□□□□□ -0.34
KLHDC4-217ENST00000566661 MRPL16Q9NX20 251 aaKnown RBP12.9□□□□□ -0.34
KLHDC4-217ENST00000566661 A0A0J9YY99 117 aa12.89□□□□□ -0.35
KLHDC4-217ENST00000566661 M0QY20 66 aa12.89□□□□□ -0.35
KLHDC4-217ENST00000566661 DEFB136Q30KP8 78 aa12.89□□□□□ -0.35
KLHDC4-217ENST00000566661 LYRM7Q5U5X0 104 aa12.89□□□□□ -0.35
KLHDC4-217ENST00000566661 TRPT1Q86TN4 253 aaKnown RBP12.89□□□□□ -0.35
KLHDC4-217ENST00000566661 ZNF688P0C7X2 276 aa12.89□□□□□ -0.35
KLHDC4-217ENST00000566661 RPL39P62891 51 aaKnown RBP12.89□□□□□ -0.35
KLHDC4-217ENST00000566661 AMTNQ6UX39 209 aa12.89□□□□□ -0.35
KLHDC4-217ENST00000566661 NFE4Q86UQ8 179 aa12.89□□□□□ -0.35
KLHDC4-217ENST00000566661 MYO9AB2RTY4 2548 aa12.88□□□□□ -0.35
KLHDC4-217ENST00000566661 IGHV1OR15-1A0A075B7D0 117 aa12.88□□□□□ -0.35
KLHDC4-217ENST00000566661 HIST2H2BDQ6DRA6 164 aa12.88□□□□□ -0.35
KLHDC4-217ENST00000566661 KRTAP1-1Q07627 177 aa12.88□□□□□ -0.35
KLHDC4-217ENST00000566661 KLHL30-AS1Q8NEE0 82 aa12.88□□□□□ -0.35
KLHDC4-217ENST00000566661 DLX4Q92988 240 aaPredicted RBP12.88□□□□□ -0.35
KLHDC4-217ENST00000566661 TMEM238C9JI98 176 aa12.87□□□□□ -0.35
KLHDC4-217ENST00000566661 SCGB1A1P11684 91 aa12.87□□□□□ -0.35
KLHDC4-217ENST00000566661 Q8N1Y9 231 aa12.87□□□□□ -0.35
KLHDC4-217ENST00000566661 SLC25A29Q8N8R3 303 aa12.87□□□□□ -0.35
KLHDC4-217ENST00000566661 MDFICQ9P1T7 246 aa12.87□□□□□ -0.35
KLHDC4-217ENST00000566661 ZNF256Q9Y2P7 627 aaPredicted RBP12.87□□□□□ -0.35
KLHDC4-217ENST00000566661 SLURP1P55000 103 aa12.86□□□□□ -0.35
KLHDC4-217ENST00000566661 ZNF56Q15929 161 aa12.86□□□□□ -0.35
KLHDC4-217ENST00000566661 ETDBQ3ZM63 59 aa12.86□□□□□ -0.35
KLHDC4-217ENST00000566661 TCTEX1D4Q5JR98 221 aa12.86□□□□□ -0.35
KLHDC4-217ENST00000566661 FAM74A4Q5TZK3 123 aa12.86□□□□□ -0.35
KLHDC4-217ENST00000566661 WFDC12Q8WWY7 111 aa12.86□□□□□ -0.35
KLHDC4-217ENST00000566661 DNAJC9-AS1A6NH13 148 aa12.86□□□□□ -0.35
KLHDC4-217ENST00000566661 UBE2D3P61077 147 aa12.86□□□□□ -0.35
KLHDC4-217ENST00000566661 UBE2D2P62837 147 aa12.86□□□□□ -0.35
KLHDC4-217ENST00000566661 TMEM170BQ5T4T1 132 aa12.86□□□□□ -0.35
KLHDC4-217ENST00000566661 ATP6V0E2Q8NHE4 81 aa12.86□□□□□ -0.35
KLHDC4-217ENST00000566661 ZNRF2Q8NHG8 242 aa12.86□□□□□ -0.35
KLHDC4-217ENST00000566661 TMEM86BQ8N661 226 aa12.85□□□□□ -0.35
KLHDC4-217ENST00000566661 DUX3Q96PT4 197 aa12.85□□□□□ -0.35
KLHDC4-217ENST00000566661 SPATA25Q9BR10 227 aa12.85□□□□□ -0.35
KLHDC4-217ENST00000566661 TRGV11A0A075B6L2 103 aa12.85□□□□□ -0.35
KLHDC4-217ENST00000566661 TSPAN13O95857 204 aa12.85□□□□□ -0.35
KLHDC4-217ENST00000566661 Q6ZSV7 163 aa12.85□□□□□ -0.35
KLHDC4-217ENST00000566661 SIGMAR1Q99720 223 aa12.85□□□□□ -0.35
KLHDC4-217ENST00000566661 EDA2RQ9HAV5 297 aa12.85□□□□□ -0.35
KLHDC4-217ENST00000566661 ACANP16112 2415 aa12.85□□□□□ -0.35
KLHDC4-217ENST00000566661 J3QQQ9 107 aa12.84□□□□□ -0.35
KLHDC4-217ENST00000566661 IGHV3-30P01768 117 aa12.84□□□□□ -0.35
KLHDC4-217ENST00000566661 IGHV3-30-5P0DP03 117 aa12.84□□□□□ -0.35
KLHDC4-217ENST00000566661 EMP1P54849 157 aa12.84□□□□□ -0.35
KLHDC4-217ENST00000566661 CFAP126Q5VTH2 177 aa12.84□□□□□ -0.35
KLHDC4-217ENST00000566661 SH2D6Q7Z4S9 175 aa12.84□□□□□ -0.35
KLHDC4-217ENST00000566661 NDUFA11Q86Y39 141 aa12.84□□□□□ -0.35
KLHDC4-217ENST00000566661 ESM1Q9NQ30 184 aa12.84□□□□□ -0.35
KLHDC4-217ENST00000566661 UNC79Q9P2D8 2635 aa12.84□□□□□ -0.35
KLHDC4-217ENST00000566661 TRAV12-2A0A075B6T6 113 aa12.84□□□□□ -0.35
KLHDC4-217ENST00000566661 GAGE12HA6NDE8 117 aa12.84□□□□□ -0.35
KLHDC4-217ENST00000566661 TEX29Q8N6K0 151 aa12.84□□□□□ -0.35
KLHDC4-217ENST00000566661 AMELXQ99217 191 aa12.84□□□□□ -0.35
KLHDC4-217ENST00000566661 SPAG8Q99932 426 aaPredicted RBP12.84□□□□□ -0.35
KLHDC4-217ENST00000566661 AKAP9Q99996 3911 aa12.83□□□□□ -0.35
KLHDC4-217ENST00000566661 I3L3M4 83 aa12.83□□□□□ -0.36
KLHDC4-217ENST00000566661 TSPEAR-AS2P59090 65 aa12.83□□□□□ -0.36
KLHDC4-217ENST00000566661 KHDC1LQ5JSQ8 128 aa12.83□□□□□ -0.36
KLHDC4-217ENST00000566661 C20orf203Q8NBC4 194 aa12.83□□□□□ -0.36
KLHDC4-217ENST00000566661 YAE1D1Q9NRH1 226 aa12.83□□□□□ -0.36
KLHDC4-217ENST00000566661 NF1P21359 2839 aa12.83□□□□□ -0.36
KLHDC4-217ENST00000566661 LGALS3P17931 250 aaKnown RBP12.82□□□□□ -0.36
KLHDC4-217ENST00000566661 TSSC4Q9Y5U2 329 aaPredicted RBP12.82□□□□□ -0.36
KLHDC4-217ENST00000566661 TRBV20-1A0A075B6N2 111 aa12.82□□□□□ -0.36
KLHDC4-217ENST00000566661 LEPROTO15243 131 aa12.82□□□□□ -0.36
KLHDC4-217ENST00000566661 SPINK13Q1W4C9 94 aa12.82□□□□□ -0.36
KLHDC4-217ENST00000566661 GCN1Q92616 2671 aaKnown RBP12.81□□□□□ -0.36
KLHDC4-217ENST00000566661 TMEM223A0PJW6 202 aa12.81□□□□□ -0.36
KLHDC4-217ENST00000566661 IGKV3-20P01619 116 aa12.81□□□□□ -0.36
KLHDC4-217ENST00000566661 P0DMU3 169 aa12.81□□□□□ -0.36
KLHDC4-217ENST00000566661 FAM231AP0DMU4 169 aa12.81□□□□□ -0.36
KLHDC4-217ENST00000566661 FAM231CP0DMU5 169 aa12.81□□□□□ -0.36
KLHDC4-217ENST00000566661 C1QTNF4Q9BXJ3 329 aa12.81□□□□□ -0.36
KLHDC4-217ENST00000566661 CUBNO60494 3623 aa12.8□□□□□ -0.36
KLHDC4-217ENST00000566661 APOMO95445 188 aa12.8□□□□□ -0.36
KLHDC4-217ENST00000566661 C4orf3Q8WVX3 66 aa12.8□□□□□ -0.36
KLHDC4-217ENST00000566661 SORL1Q92673 2214 aa12.8□□□□□ -0.36
KLHDC4-217ENST00000566661 CRYBA4P53673 196 aa12.8□□□□□ -0.36
KLHDC4-217ENST00000566661 C10orf126Q8N4M7 172 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 238.6 ms