RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CD3DP04234 171 aa1.85□□□□□ -2.11
HERPUD1-211ENST00000566550 SAA1P0DJI8 122 aaPredicted RBP1.85□□□□□ -2.11
HERPUD1-211ENST00000566550 HIST1H1DP16402 221 aaKnown RBP1.85□□□□□ -2.11
HERPUD1-211ENST00000566550 ZNF93P35789 620 aaPredicted RBP1.85□□□□□ -2.11
HERPUD1-211ENST00000566550 RBP2P50120 134 aa1.85□□□□□ -2.11
HERPUD1-211ENST00000566550 DEFB113Q30KQ7 82 aa1.85□□□□□ -2.11
HERPUD1-211ENST00000566550 PRR9Q5T870 116 aa1.85□□□□□ -2.11
HERPUD1-211ENST00000566550 Q6ZTI0 123 aa1.85□□□□□ -2.11
HERPUD1-211ENST00000566550 OR5AS1Q8N127 324 aa1.85□□□□□ -2.11
HERPUD1-211ENST00000566550 TMEM254Q8TBM7 123 aa1.85□□□□□ -2.11
HERPUD1-211ENST00000566550 CST9LQ9H4G1 147 aa1.85□□□□□ -2.11
HERPUD1-211ENST00000566550 CCDC167Q9P0B6 97 aa1.85□□□□□ -2.11
HERPUD1-211ENST00000566550 MYO16Q9Y6X6 1858 aa1.85□□□□□ -2.11
HERPUD1-211ENST00000566550 UBR4Q5T4S7 5183 aa1.85□□□□□ -2.11
HERPUD1-211ENST00000566550 SHANK1Q9Y566 2161 aa1.84□□□□□ -2.11
HERPUD1-211ENST00000566550 IGHV1-24A0A0C4DH33 117 aa1.84□□□□□ -2.11
HERPUD1-211ENST00000566550 SPAARA0A1B0GVQ0 90 aa1.84□□□□□ -2.11
HERPUD1-211ENST00000566550 C9orf170A2RU37 121 aa1.84□□□□□ -2.11
HERPUD1-211ENST00000566550 ZNF736B4DX44 427 aaPredicted RBP1.84□□□□□ -2.11
HERPUD1-211ENST00000566550 LOC730098B7Z3J9 87 aa1.84□□□□□ -2.11
HERPUD1-211ENST00000566550 APODP05090 189 aa1.84□□□□□ -2.11
HERPUD1-211ENST00000566550 KRTAP13-2Q52LG2 175 aa1.84□□□□□ -2.11
HERPUD1-211ENST00000566550 C9orf163Q8N9P6 203 aa1.84□□□□□ -2.11
HERPUD1-211ENST00000566550 OTOSQ8NHW6 89 aa1.84□□□□□ -2.11
HERPUD1-211ENST00000566550 TIMM21Q9BVV7 248 aa1.84□□□□□ -2.11
HERPUD1-211ENST00000566550 SLC35B3Q9H1N7 401 aa1.84□□□□□ -2.11
HERPUD1-211ENST00000566550 LHFPL6Q9Y693 200 aa1.84□□□□□ -2.11
HERPUD1-211ENST00000566550 MYH7P12883 1935 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 ANKHD1Q8IWZ3 2542 aaKnown RBP1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 FLNAP21333 2647 aaKnown RBP1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 COL5A1P20908 1838 aaPredicted RBP1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 TRBV20-1A0A075B6N2 111 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 A0A0G2JQZ4 141 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 A0A1W2PNU3 283 aaPredicted RBP1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 TCRBV4S1A1TA0A5B7 111 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 CCDC179H3BU77 68 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 SMIM6P0DI80 62 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 ETV6P41212 452 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 MIC13Q5XKP0 118 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 CCL4L1Q8NHW4 92 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 PP6455Q8WZ26 134 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 MUCL1Q96DR8 90 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 DPH3Q96FX2 82 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 PPP3R2Q96LZ3 170 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 SEC11CQ9BY50 192 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 SAR1AQ9NR31 198 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 COA4Q9NYJ1 87 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 PRO2289Q9P1D8 64 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 METTL1Q9UBP6 276 aaKnown RBP1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 MED13LQ71F56 2210 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 PKD1L1Q8TDX9 2849 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 COL6A5A8TX70 2615 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 MICAL3Q7RTP6 2002 aa1.83□□□□□ -2.12
HERPUD1-211ENST00000566550 SPENQ96T58 3664 aaKnown RBP1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 A0A1B0GUL6 1792 aa1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 HIVEP3Q5T1R4 2406 aa1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 SIP14410 1827 aa1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 IGKV3D-11A0A0A0MRZ8 115 aa1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 TRAV10A0A0B4J240 114 aa1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 PNMA8CA0A1B0GUJ8 204 aa1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 EDF1O60869 148 aaKnown RBP1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 MIFP14174 115 aa1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 KRTAP10-8P60410 259 aa1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 GKN2Q86XP6 184 aa1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 SNX29P2Q8IUI4 249 aa1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 ATOH7Q8N100 152 aa1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 SFT2D1Q8WV19 159 aa1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 CYYR1Q96J86 154 aa1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 SMIM7Q9BQ49 75 aa1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 RERGLQ9H628 205 aa1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 PRRC2AP48634 2157 aaKnown RBP1.82□□□□□ -2.12
HERPUD1-211ENST00000566550 NBEAL2Q6ZNJ1 2754 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 ITPR2Q14571 2701 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 TRAV14DV4A0A0A6YYC5 116 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 E7EUB6 86 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 ERC2-IT1O76042 136 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 CCL4P13236 92 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 GNG4P50150 75 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 DSCR4P56555 118 aaPredicted RBP1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 PPP3R1P63098 170 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 IGFL1Q6UW32 110 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 Q6ZUT4 128 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 GTF2H5Q6ZYL4 71 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 ARPINQ7Z6K5 226 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 FAM19A2Q8N3H0 131 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 BOKQ9UMX3 212 aaPredicted RBP1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 NOP16Q9Y3C1 178 aaKnown RBP1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 LRBAP50851 2863 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 OTOGQ6ZRI0 2925 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 MYH6P13533 1939 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 RP1P56715 2156 aa1.81□□□□□ -2.12
HERPUD1-211ENST00000566550 CRYBG3Q68DQ2 2970 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 ACACAQ13085 2346 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 ADGRG4Q8IZF6 3080 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 TRAV12-2A0A075B6T6 113 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 TRAV12-1A0A0B4J245 112 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 C2orf70A6NJV1 201 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 YPEL1O60688 119 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 PRB4P10163 310 aaPredicted RBP1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 TPPP2P59282 170 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms