RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 IGIPA6NJ69 53 aa9.8□□□□□ -0.84
LINC00563-201ENST00000566370 SMIM13P0DJ93 91 aa9.8□□□□□ -0.84
LINC00563-201ENST00000566370 GCSHP23434 173 aa9.8□□□□□ -0.84
LINC00563-201ENST00000566370 ODF3L2Q3SX64 289 aa9.8□□□□□ -0.84
LINC00563-201ENST00000566370 GTF2H5Q6ZYL4 71 aa9.8□□□□□ -0.84
LINC00563-201ENST00000566370 C1QTNF4Q9BXJ3 329 aa9.8□□□□□ -0.84
LINC00563-201ENST00000566370 FBN2P35556 2912 aa9.79□□□□□ -0.84
LINC00563-201ENST00000566370 CRYBA4P53673 196 aa9.79□□□□□ -0.84
LINC00563-201ENST00000566370 C20orf203Q8NBC4 194 aa9.79□□□□□ -0.84
LINC00563-201ENST00000566370 CST9LQ9H4G1 147 aa9.79□□□□□ -0.84
LINC00563-201ENST00000566370 C9orf118A6NHY6 69 aa9.78□□□□□ -0.84
LINC00563-201ENST00000566370 C11orf86A6NJI1 115 aa9.78□□□□□ -0.84
LINC00563-201ENST00000566370 ZNF124Q15973 351 aa9.78□□□□□ -0.84
LINC00563-201ENST00000566370 BEAN1Q3B7T3 259 aa9.78□□□□□ -0.84
LINC00563-201ENST00000566370 HIST1H4GQ99525 98 aa9.78□□□□□ -0.84
LINC00563-201ENST00000566370 RS1O15537 224 aa9.77□□□□□ -0.85
LINC00563-201ENST00000566370 TSHBP01222 138 aa9.77□□□□□ -0.85
LINC00563-201ENST00000566370 RPL39P62891 51 aaKnown RBP9.77□□□□□ -0.85
LINC00563-201ENST00000566370 SMAGPQ0VAQ4 97 aa9.77□□□□□ -0.85
LINC00563-201ENST00000566370 MORN3Q6PF18 240 aaPredicted RBP9.77□□□□□ -0.85
LINC00563-201ENST00000566370 CEND1Q8N111 149 aa9.77□□□□□ -0.85
LINC00563-201ENST00000566370 VCX2Q9H322 139 aa9.77□□□□□ -0.85
LINC00563-201ENST00000566370 XCL2Q9UBD3 114 aa9.77□□□□□ -0.85
LINC00563-201ENST00000566370 TMEM238LA0A1B0GVL6 79 aa9.76□□□□□ -0.85
LINC00563-201ENST00000566370 A6NJY4 79 aa9.76□□□□□ -0.85
LINC00563-201ENST00000566370 CFAP126Q5VTH2 177 aa9.76□□□□□ -0.85
LINC00563-201ENST00000566370 SCGB1D4Q6XE38 83 aa9.76□□□□□ -0.85
LINC00563-201ENST00000566370 NDUFA11Q86Y39 141 aa9.76□□□□□ -0.85
LINC00563-201ENST00000566370 PRADC1Q9BSG0 188 aa9.76□□□□□ -0.85
LINC00563-201ENST00000566370 TM2D2Q9BX73 214 aa9.76□□□□□ -0.85
LINC00563-201ENST00000566370 PYGO1Q9Y3Y4 419 aa9.76□□□□□ -0.85
LINC00563-201ENST00000566370 AGRNO00468 2067 aa9.76□□□□□ -0.85
LINC00563-201ENST00000566370 CENPEQ02224 2701 aa9.75□□□□□ -0.85
LINC00563-201ENST00000566370 ITPR3Q14573 2671 aa9.75□□□□□ -0.85
LINC00563-201ENST00000566370 ZNF815PA8K554 130 aa9.75□□□□□ -0.85
LINC00563-201ENST00000566370 CIDEAO60543 219 aa9.75□□□□□ -0.85
LINC00563-201ENST00000566370 IGHV3-53P01767 116 aa9.75□□□□□ -0.85
LINC00563-201ENST00000566370 TMEM170BQ5T4T1 132 aa9.75□□□□□ -0.85
LINC00563-201ENST00000566370 C11orf72Q8NBR9 251 aa9.75□□□□□ -0.85
LINC00563-201ENST00000566370 SPANXA1Q9NS26 97 aa9.75□□□□□ -0.85
LINC00563-201ENST00000566370 CRYBG3Q68DQ2 2970 aa9.75□□□□□ -0.85
LINC00563-201ENST00000566370 IGHV3OR16-12A0A075B7B8 117 aa9.74□□□□□ -0.85
LINC00563-201ENST00000566370 IGHV3-73A0A0B4J1V6 119 aa9.74□□□□□ -0.85
LINC00563-201ENST00000566370 GAGE10A6NGK3 116 aa9.74□□□□□ -0.85
LINC00563-201ENST00000566370 IGLV1-51P01701 117 aa9.74□□□□□ -0.85
LINC00563-201ENST00000566370 PF4P02776 101 aa9.74□□□□□ -0.85
LINC00563-201ENST00000566370 COTL1Q14019 142 aa9.74□□□□□ -0.85
LINC00563-201ENST00000566370 NFE4Q86UQ8 179 aa9.74□□□□□ -0.85
LINC00563-201ENST00000566370 TMEM263Q8WUH6 116 aaKnown RBP9.74□□□□□ -0.85
LINC00563-201ENST00000566370 MRPL16Q9NX20 251 aaKnown RBP9.74□□□□□ -0.85
LINC00563-201ENST00000566370 IGLV4-69A0A075B6H9 119 aa9.73□□□□□ -0.85
LINC00563-201ENST00000566370 CCL25O15444 150 aa9.73□□□□□ -0.85
LINC00563-201ENST00000566370 LGALS3P17931 250 aaKnown RBP9.73□□□□□ -0.85
LINC00563-201ENST00000566370 AZU1P20160 251 aa9.73□□□□□ -0.85
LINC00563-201ENST00000566370 AMMECR1LQ6DCA0 310 aa9.73□□□□□ -0.85
LINC00563-201ENST00000566370 UFSP1Q6NVU6 142 aa9.73□□□□□ -0.85
LINC00563-201ENST00000566370 Q6ZVH6 145 aa9.73□□□□□ -0.85
LINC00563-201ENST00000566370 APCP25054 2843 aa9.73□□□□□ -0.85
LINC00563-201ENST00000566370 CELSR2Q9HCU4 2923 aa9.73□□□□□ -0.85
LINC00563-201ENST00000566370 FABP2P12104 132 aa9.73□□□□□ -0.85
LINC00563-201ENST00000566370 PROK1P58294 105 aa9.73□□□□□ -0.85
LINC00563-201ENST00000566370 PLEKHB2Q96CS7 222 aa9.73□□□□□ -0.85
LINC00563-201ENST00000566370 C16orf74Q96GX8 76 aa9.73□□□□□ -0.85
LINC00563-201ENST00000566370 TTTY13Q9BZ97 58 aa9.73□□□□□ -0.85
LINC00563-201ENST00000566370 MAP1AP78559 2803 aaPredicted RBP9.72□□□□□ -0.85
LINC00563-201ENST00000566370 TEX15Q9BXT5 2789 aa9.72□□□□□ -0.85
LINC00563-201ENST00000566370 TRGV1A0A0A0MS02 117 aa9.72□□□□□ -0.85
LINC00563-201ENST00000566370 TRBV10-1A0A0K0K1A3 114 aa9.72□□□□□ -0.85
LINC00563-201ENST00000566370 H3BUT2 72 aa9.72□□□□□ -0.85
LINC00563-201ENST00000566370 RPL36AP83881 106 aaKnown RBP9.72□□□□□ -0.85
LINC00563-201ENST00000566370 SRSF9Q13242 221 aaKnown RBP eCLIP9.72□□□□□ -0.85
LINC00563-201ENST00000566370 C1orf158Q8N1D5 194 aa9.72□□□□□ -0.85
LINC00563-201ENST00000566370 MAPKAPK5-AS1Q8N8E1 139 aa9.72□□□□□ -0.85
LINC00563-201ENST00000566370 OR5A1Q8NGJ0 315 aa9.72□□□□□ -0.85
LINC00563-201ENST00000566370 RPL36ALQ969Q0 106 aaKnown RBP9.72□□□□□ -0.85
LINC00563-201ENST00000566370 RAB37Q96AX2 223 aa9.72□□□□□ -0.85
LINC00563-201ENST00000566370 NHP2Q9NX24 153 aaKnown RBP9.72□□□□□ -0.85
LINC00563-201ENST00000566370 IGLV4-3A0A075B6K6 122 aa9.71□□□□□ -0.86
LINC00563-201ENST00000566370 TRAV4A0A0B4J268 109 aa9.71□□□□□ -0.86
LINC00563-201ENST00000566370 LEPROTO15243 131 aa9.71□□□□□ -0.86
LINC00563-201ENST00000566370 P0DMU3 169 aa9.71□□□□□ -0.86
LINC00563-201ENST00000566370 FAM231AP0DMU4 169 aa9.71□□□□□ -0.86
LINC00563-201ENST00000566370 FAM231CP0DMU5 169 aa9.71□□□□□ -0.86
LINC00563-201ENST00000566370 MYO9AB2RTY4 2548 aa9.7□□□□□ -0.86
LINC00563-201ENST00000566370 FXYD2P54710 66 aa9.7□□□□□ -0.86
LINC00563-201ENST00000566370 SAMD5Q5TGI4 173 aa9.7□□□□□ -0.86
LINC00563-201ENST00000566370 IL17DQ8TAD2 202 aa9.7□□□□□ -0.86
LINC00563-201ENST00000566370 CSMD1Q96PZ7 3565 aa9.69□□□□□ -0.86
LINC00563-201ENST00000566370 A0A1W2PPM0 123 aa9.69□□□□□ -0.86
LINC00563-201ENST00000566370 K7EP34 96 aa9.69□□□□□ -0.86
LINC00563-201ENST00000566370 DAZ2Q13117 558 aaKnown RBP9.69□□□□□ -0.86
LINC00563-201ENST00000566370 HIST2H2BDQ6DRA6 164 aa9.69□□□□□ -0.86
LINC00563-201ENST00000566370 DGAT2L7PQ6IED9 249 aa9.69□□□□□ -0.86
LINC00563-201ENST00000566370 RNASE8Q8TDE3 154 aaKnown RBP9.69□□□□□ -0.86
LINC00563-201ENST00000566370 DEFB104AQ8WTQ1 72 aa9.69□□□□□ -0.86
LINC00563-201ENST00000566370 FLNAP21333 2647 aaKnown RBP9.69□□□□□ -0.86
LINC00563-201ENST00000566370 ZANQ9Y493 2812 aa9.68□□□□□ -0.86
LINC00563-201ENST00000566370 TRBV7-3A0A075B6L6 115 aa9.68□□□□□ -0.86
LINC00563-201ENST00000566370 J3QQQ9 107 aa9.68□□□□□ -0.86
LINC00563-201ENST00000566370 K7EQD1 137 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms