RNA–Protein interactions for RNA: ENST00000566024.1

CYLD-209, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-209ENST00000566024 ZNF705GA8MUZ8 300 aaPredicted RBP3.33□□□□□ -1.88
CYLD-209ENST00000566024 ZNF705FA8MVS1 300 aaPredicted RBP3.33□□□□□ -1.88
CYLD-209ENST00000566024 SERF1AO75920 110 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 APCSP02743 223 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 TCRAP04437 139 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 RBMY1A1P0DJD3 496 aaKnown RBP3.33□□□□□ -1.88
CYLD-209ENST00000566024 RBMY1CP0DJD4 496 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 DEFB130BP0DP73 79 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 DEFB130AP0DP74 79 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 CDKN1BP46527 198 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 UBE2G1P62253 170 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 PDE6HQ13956 83 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 RBMY1FQ15415 496 aaKnown RBP3.33□□□□□ -1.88
CYLD-209ENST00000566024 FAM222AQ5U5X8 452 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 COX8CQ7Z4L0 72 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 BAGE3Q86Y29 109 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 Q8NAQ8 132 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 NHLRC2Q8NBF2 726 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 KCNS1Q96KK3 526 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 RNASE7Q9H1E1 156 aaKnown RBP3.33□□□□□ -1.88
CYLD-209ENST00000566024 ZNF586Q9NXT0 402 aa3.33□□□□□ -1.88
CYLD-209ENST00000566024 COL7A1Q02388 2944 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 TRBV19A0A075B6N1 114 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 IGKV2-40A0A087WW87 121 aaPredicted RBP3.32□□□□□ -1.88
CYLD-209ENST00000566024 A0A1B0GVY2 172 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 PGPA6NDG6 321 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 F5H768 121 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 K7EQM0 130 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 M0R3E3 92 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 NUPR1O60356 82 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 ZNF253O75346 499 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 ZNF324O75467 553 aaPredicted RBP3.32□□□□□ -1.88
CYLD-209ENST00000566024 IGKV2D-40P01614 121 aaPredicted RBP3.32□□□□□ -1.88
CYLD-209ENST00000566024 SLC25A5P05141 298 aaKnown RBP3.32□□□□□ -1.88
CYLD-209ENST00000566024 GIG44P09565 113 aaPredicted RBP3.32□□□□□ -1.88
CYLD-209ENST00000566024 MGST1P10620 155 aaKnown RBP3.32□□□□□ -1.88
CYLD-209ENST00000566024 PMCHP20382 165 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 PMCHL1Q16048 86 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 Q6AWC8 147 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 EXOC3-AS1Q8N2X6 119 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 TMEM75Q8N9X5 138 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 GATD1Q8NB37 220 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 NUP35Q8NFH5 326 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 CHCHD1Q96BP2 118 aaKnown RBP3.32□□□□□ -1.88
CYLD-209ENST00000566024 C16orf74Q96GX8 76 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 MIEN1Q9BRT3 115 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 NDFIP1Q9BT67 221 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 RPP21Q9H633 154 aaKnown RBP3.32□□□□□ -1.88
CYLD-209ENST00000566024 CELA1Q9UNI1 258 aa3.32□□□□□ -1.88
CYLD-209ENST00000566024 DNAH9Q9NYC9 4486 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 IGHV4-4A0A075B6R2 117 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 TRAV12-3A0A0B4J271 114 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 TRAV34A0A0B4J273 112 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 GRIFINA4D1Z8 144 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 LYRM9A8MSI8 78 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 HIGD1CA8MV81 97 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 M0R143 59 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 MRPS12O15235 138 aaKnown RBP3.31□□□□□ -1.88
CYLD-209ENST00000566024 CRXO43186 299 aaPredicted RBP3.31□□□□□ -1.88
CYLD-209ENST00000566024 P01737 135 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 OR5AL1P0C617 328 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 IGLC2P0DOY2 106 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 SRIP30626 198 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 RNASE4P34096 147 aaKnown RBP3.31□□□□□ -1.88
CYLD-209ENST00000566024 TCTAP57738 103 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 HBBP68871 147 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 ERCC8Q13216 396 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 C12orf74Q32Q52 190 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 ZNF705AQ6ZN79 300 aaPredicted RBP3.31□□□□□ -1.88
CYLD-209ENST00000566024 C1orf158Q8N1D5 194 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 CSNK1G2-AS1Q8NCQ2 148 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 C18orf32Q8TCD1 76 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 MRPL53Q96EL3 112 aaKnown RBP3.31□□□□□ -1.88
CYLD-209ENST00000566024 LINC00477Q96M19 166 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 LINC00479Q96M42 142 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 ALKBH7Q9BT30 221 aaPredicted RBP3.31□□□□□ -1.88
CYLD-209ENST00000566024 SAMD10Q9BYL1 202 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 PRO1933Q9H354 126 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 Q9H3A6 140 aa3.31□□□□□ -1.88
CYLD-209ENST00000566024 NOP10Q9NPE3 64 aaKnown RBP3.31□□□□□ -1.88
CYLD-209ENST00000566024 TIMM8BQ9Y5J9 83 aaPredicted RBP3.31□□□□□ -1.88
CYLD-209ENST00000566024 DNAH3Q8TD57 4116 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 TRGV2A0A075B6R0 118 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 C7orf71A4D174 169 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 ATP5G1P05496 136 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 P0DMU3 169 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 FAM231AP0DMU4 169 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 FAM231CP0DMU5 169 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 CTRLP40313 264 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 ZNF138P52744 262 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 SLAQ13239 276 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 SAPCD1Q5SSQ6 148 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 MRPL54Q6P161 138 aaKnown RBP3.3□□□□□ -1.88
CYLD-209ENST00000566024 AMTNQ6UX39 209 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 ZNF493Q6ZR52 646 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 Q86TA4 180 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 NIT1Q86X76 327 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 Q8N976 141 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 Q8TAT8 98 aa3.3□□□□□ -1.88
CYLD-209ENST00000566024 TMEM263Q8WUH6 116 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms