RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 M0QY20 66 aa10.04□□□□□ -0.8
SMPD3-205ENST00000563455 RS1O15537 224 aa10.04□□□□□ -0.8
SMPD3-205ENST00000563455 GIG44P09565 113 aaPredicted RBP10.04□□□□□ -0.8
SMPD3-205ENST00000563455 POLR2KP53803 58 aaKnown RBP10.04□□□□□ -0.8
SMPD3-205ENST00000563455 SUMO4Q6EEV6 95 aa10.04□□□□□ -0.8
SMPD3-205ENST00000563455 OVOL2Q9BRP0 275 aa10.04□□□□□ -0.8
SMPD3-205ENST00000563455 NHLRC4P0CG21 123 aaPredicted RBP10.03□□□□□ -0.8
SMPD3-205ENST00000563455 RPL35AP18077 110 aaKnown RBP10.03□□□□□ -0.8
SMPD3-205ENST00000563455 PKIAP61925 76 aa10.03□□□□□ -0.8
SMPD3-205ENST00000563455 FAM74A4Q5TZK3 123 aa10.03□□□□□ -0.8
SMPD3-205ENST00000563455 TEX43Q6ZNM6 134 aa10.03□□□□□ -0.8
SMPD3-205ENST00000563455 IGHV3OR16-12A0A075B7B8 117 aa10.02□□□□□ -0.81
SMPD3-205ENST00000563455 A0A087WWL8 130 aa10.02□□□□□ -0.81
SMPD3-205ENST00000563455 TRAV26-2A0A0B4J265 109 aa10.02□□□□□ -0.81
SMPD3-205ENST00000563455 IGHV3-53P01767 116 aa10.02□□□□□ -0.81
SMPD3-205ENST00000563455 AZU1P20160 251 aa10.02□□□□□ -0.81
SMPD3-205ENST00000563455 CFAP126Q5VTH2 177 aa10.02□□□□□ -0.81
SMPD3-205ENST00000563455 UFSP1Q6NVU6 142 aa10.02□□□□□ -0.81
SMPD3-205ENST00000563455 B9D2Q9BPU9 175 aa10.02□□□□□ -0.81
SMPD3-205ENST00000563455 TRAV4A0A0B4J268 109 aa10.01□□□□□ -0.81
SMPD3-205ENST00000563455 TRBV10-1A0A0K0K1A3 114 aa10.01□□□□□ -0.81
SMPD3-205ENST00000563455 SDHAF1A6NFY7 115 aa10.01□□□□□ -0.81
SMPD3-205ENST00000563455 A8MZ25 164 aa10.01□□□□□ -0.81
SMPD3-205ENST00000563455 GATA1P15976 413 aaPredicted RBP10.01□□□□□ -0.81
SMPD3-205ENST00000563455 KRTAP10-11P60412 298 aa10.01□□□□□ -0.81
SMPD3-205ENST00000563455 RHOHQ15669 191 aa10.01□□□□□ -0.81
SMPD3-205ENST00000563455 OR4C5Q8NGB2 326 aa10.01□□□□□ -0.81
SMPD3-205ENST00000563455 C18orf15Q96N68 181 aa10.01□□□□□ -0.81
SMPD3-205ENST00000563455 VAMP8Q9BV40 100 aa10.01□□□□□ -0.81
SMPD3-205ENST00000563455 AGRNO00468 2067 aa10□□□□□ -0.81
SMPD3-205ENST00000563455 I3L3M4 83 aa10□□□□□ -0.81
SMPD3-205ENST00000563455 SPRY2O43597 315 aa10□□□□□ -0.81
SMPD3-205ENST00000563455 NUDT3O95989 172 aa10□□□□□ -0.81
SMPD3-205ENST00000563455 IFI27L1Q96BM0 104 aa10□□□□□ -0.81
SMPD3-205ENST00000563455 WWC2-AS2Q96NR7 200 aa10□□□□□ -0.81
SMPD3-205ENST00000563455 JPT2Q9H910 190 aa10□□□□□ -0.81
SMPD3-205ENST00000563455 TNFRSF18Q9Y5U5 241 aa10□□□□□ -0.81
SMPD3-205ENST00000563455 HSBP1L1C9JCN9 74 aa9.99□□□□□ -0.81
SMPD3-205ENST00000563455 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.99□□□□□ -0.81
SMPD3-205ENST00000563455 NPSP0C0P6 89 aa9.99□□□□□ -0.81
SMPD3-205ENST00000563455 LINC01545Q5VT33 79 aa9.99□□□□□ -0.81
SMPD3-205ENST00000563455 LGALS9CQ6DKI2 356 aa9.99□□□□□ -0.81
SMPD3-205ENST00000563455 TOMM6Q96B49 74 aa9.99□□□□□ -0.81
SMPD3-205ENST00000563455 RPL39LQ96EH5 51 aaKnown RBP9.99□□□□□ -0.81
SMPD3-205ENST00000563455 A0A096LNJ9 63 aa9.98□□□□□ -0.81
SMPD3-205ENST00000563455 TRGV1A0A0A0MS02 117 aa9.98□□□□□ -0.81
SMPD3-205ENST00000563455 GAS8-AS1O95177 125 aa9.98□□□□□ -0.81
SMPD3-205ENST00000563455 PAPPA-AS1Q5QFB9 102 aa9.98□□□□□ -0.81
SMPD3-205ENST00000563455 WFDC10AQ9H1F0 79 aa9.98□□□□□ -0.81
SMPD3-205ENST00000563455 CYSLTR1Q9Y271 337 aa9.98□□□□□ -0.81
SMPD3-205ENST00000563455 TRAV9-2A0A087WT02 112 aa9.97□□□□□ -0.81
SMPD3-205ENST00000563455 TEX48A0A1B0GUV7 120 aa9.97□□□□□ -0.81
SMPD3-205ENST00000563455 LYRM9A8MSI8 78 aa9.97□□□□□ -0.81
SMPD3-205ENST00000563455 SMAGPQ0VAQ4 97 aa9.97□□□□□ -0.81
SMPD3-205ENST00000563455 ERASQ7Z444 233 aa9.97□□□□□ -0.81
SMPD3-205ENST00000563455 TMEM141Q96I45 108 aa9.97□□□□□ -0.81
SMPD3-205ENST00000563455 MUC4Q99102 2169 aa9.97□□□□□ -0.81
SMPD3-205ENST00000563455 TRBV6-4A0A1B0GX49 114 aa9.96□□□□□ -0.82
SMPD3-205ENST00000563455 MIFP14174 115 aa9.96□□□□□ -0.82
SMPD3-205ENST00000563455 Q8N976 141 aa9.96□□□□□ -0.82
SMPD3-205ENST00000563455 NOP10Q9NPE3 64 aaKnown RBP9.96□□□□□ -0.82
SMPD3-205ENST00000563455 MRPL16Q9NX20 251 aaKnown RBP9.96□□□□□ -0.82
SMPD3-205ENST00000563455 TP53TG1Q9Y2A0 90 aa9.96□□□□□ -0.82
SMPD3-205ENST00000563455 TRGV2A0A075B6R0 118 aa9.95□□□□□ -0.82
SMPD3-205ENST00000563455 TRAV12-1A0A0B4J245 112 aa9.95□□□□□ -0.82
SMPD3-205ENST00000563455 CRYBA4P53673 196 aa9.95□□□□□ -0.82
SMPD3-205ENST00000563455 C2orf66Q6UXQ4 117 aa9.95□□□□□ -0.82
SMPD3-205ENST00000563455 Q6ZN92 141 aa9.95□□□□□ -0.82
SMPD3-205ENST00000563455 SCGB3A1Q96QR1 104 aa9.95□□□□□ -0.82
SMPD3-205ENST00000563455 TIMM17AQ99595 171 aa9.95□□□□□ -0.82
SMPD3-205ENST00000563455 PLAC8L1A1L4L8 177 aa9.94□□□□□ -0.82
SMPD3-205ENST00000563455 PRSS1P07477 247 aa9.94□□□□□ -0.82
SMPD3-205ENST00000563455 RPL36AP83881 106 aaKnown RBP9.94□□□□□ -0.82
SMPD3-205ENST00000563455 DAZ4Q86SG3 579 aaKnown RBP9.94□□□□□ -0.82
SMPD3-205ENST00000563455 ZNF664Q8N3J9 261 aa9.94□□□□□ -0.82
SMPD3-205ENST00000563455 LINC00612Q8N6U2 182 aa9.94□□□□□ -0.82
SMPD3-205ENST00000563455 RPL36ALQ969Q0 106 aaKnown RBP9.94□□□□□ -0.82
SMPD3-205ENST00000563455 ZMAT4Q9H898 229 aa9.94□□□□□ -0.82
SMPD3-205ENST00000563455 DAZ3Q9NR90 486 aaKnown RBP9.94□□□□□ -0.82
SMPD3-205ENST00000563455 TMEM97Q5BJF2 176 aa9.93□□□□□ -0.82
SMPD3-205ENST00000563455 Q6ZTI0 123 aa9.93□□□□□ -0.82
SMPD3-205ENST00000563455 RNF183Q96D59 192 aa9.93□□□□□ -0.82
SMPD3-205ENST00000563455 TRBV7-3A0A075B6L6 115 aa9.92□□□□□ -0.82
SMPD3-205ENST00000563455 K7EQD1 137 aa9.92□□□□□ -0.82
SMPD3-205ENST00000563455 IGHV4-30-4P0DP06 118 aa9.92□□□□□ -0.82
SMPD3-205ENST00000563455 PLNP26678 52 aa9.92□□□□□ -0.82
SMPD3-205ENST00000563455 PRADC1Q9BSG0 188 aa9.92□□□□□ -0.82
SMPD3-205ENST00000563455 COTL1Q14019 142 aa9.91□□□□□ -0.82
SMPD3-205ENST00000563455 LINC00173Q6ZV60 143 aa9.91□□□□□ -0.82
SMPD3-205ENST00000563455 NEXN-AS1Q8NBZ9 246 aa9.91□□□□□ -0.82
SMPD3-205ENST00000563455 PYGO1Q9Y3Y4 419 aa9.91□□□□□ -0.82
SMPD3-205ENST00000563455 X6R8D5 127 aa9.91□□□□□ -0.82
SMPD3-205ENST00000563455 DNAH3Q8TD57 4116 aa9.91□□□□□ -0.82
SMPD3-205ENST00000563455 A0A087WX48 190 aa9.9□□□□□ -0.82
SMPD3-205ENST00000563455 PCP4L1A6NKN8 68 aa9.9□□□□□ -0.82
SMPD3-205ENST00000563455 C3orf84H3BNL1 204 aa9.9□□□□□ -0.82
SMPD3-205ENST00000563455 PRM2P04554 102 aa9.9□□□□□ -0.82
SMPD3-205ENST00000563455 DDTP30046 118 aa9.9□□□□□ -0.82
SMPD3-205ENST00000563455 SPATA45Q537H7 98 aa9.9□□□□□ -0.82
SMPD3-205ENST00000563455 MRPL52Q86TS9 123 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms