RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ARPC5O15511 151 aa8.39□□□□□ -1.07
SF3B3-202ENST00000562722 GAGE6Q13070 117 aa8.39□□□□□ -1.07
SF3B3-202ENST00000562722 TMEM97Q5BJF2 176 aa8.39□□□□□ -1.07
SF3B3-202ENST00000562722 PRR27Q6MZM9 219 aa8.39□□□□□ -1.07
SF3B3-202ENST00000562722 LINC00269Q8N2A0 174 aa8.39□□□□□ -1.07
SF3B3-202ENST00000562722 DERL1Q9BUN8 251 aa8.39□□□□□ -1.07
SF3B3-202ENST00000562722 PKHD1L1Q86WI1 4243 aa8.38□□□□□ -1.07
SF3B3-202ENST00000562722 PFDN1O60925 122 aa8.38□□□□□ -1.07
SF3B3-202ENST00000562722 S100A9P06702 114 aaKnown RBP8.38□□□□□ -1.07
SF3B3-202ENST00000562722 RBX1P62877 108 aa8.38□□□□□ -1.07
SF3B3-202ENST00000562722 DGAT2L7PQ6IED9 249 aa8.38□□□□□ -1.07
SF3B3-202ENST00000562722 BAGE2Q86Y30 109 aa8.38□□□□□ -1.07
SF3B3-202ENST00000562722 TRBV25-1A0A075B6N4 114 aa8.37□□□□□ -1.07
SF3B3-202ENST00000562722 SCO2A0A1W2PP80 73 aa8.37□□□□□ -1.07
SF3B3-202ENST00000562722 C9orf163Q8N9P6 203 aa8.37□□□□□ -1.07
SF3B3-202ENST00000562722 FAM213BQ8TBF2 198 aa8.37□□□□□ -1.07
SF3B3-202ENST00000562722 SFT2D1Q8WV19 159 aa8.37□□□□□ -1.07
SF3B3-202ENST00000562722 AP1S3Q96PC3 154 aa8.37□□□□□ -1.07
SF3B3-202ENST00000562722 IGLV10-54A0A075B6I4 117 aa8.36□□□□□ -1.07
SF3B3-202ENST00000562722 SNAI2O43623 268 aa8.36□□□□□ -1.07
SF3B3-202ENST00000562722 MGPP08493 103 aa8.36□□□□□ -1.07
SF3B3-202ENST00000562722 CXCL1P09341 107 aa8.36□□□□□ -1.07
SF3B3-202ENST00000562722 OR5AL1P0C617 328 aa8.36□□□□□ -1.07
SF3B3-202ENST00000562722 HNRNPA3P51991 378 aaKnown RBP8.36□□□□□ -1.07
SF3B3-202ENST00000562722 NTM-AS1Q6ZSK4 140 aa8.36□□□□□ -1.07
SF3B3-202ENST00000562722 DAZAP1Q96EP5 407 aaKnown RBP8.36□□□□□ -1.07
SF3B3-202ENST00000562722 TPPP3Q9BW30 176 aa8.36□□□□□ -1.07
SF3B3-202ENST00000562722 CYTL1Q9NRR1 136 aa8.36□□□□□ -1.07
SF3B3-202ENST00000562722 PRR34Q9NV39 138 aa8.36□□□□□ -1.07
SF3B3-202ENST00000562722 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
SF3B3-202ENST00000562722 IGHV1-24A0A0C4DH33 117 aa8.35□□□□□ -1.07
SF3B3-202ENST00000562722 hDV102S1A0JD36 115 aa8.35□□□□□ -1.07
SF3B3-202ENST00000562722 DPH3Q96FX2 82 aa8.35□□□□□ -1.07
SF3B3-202ENST00000562722 VAX2Q9UIW0 290 aa8.35□□□□□ -1.07
SF3B3-202ENST00000562722 A0A0D9SG52 128 aa8.34□□□□□ -1.07
SF3B3-202ENST00000562722 PANO1I0J062 215 aa8.34□□□□□ -1.07
SF3B3-202ENST00000562722 REG3AQ06141 175 aa8.34□□□□□ -1.07
SF3B3-202ENST00000562722 LCE2DQ5TA82 110 aaPredicted RBP8.34□□□□□ -1.07
SF3B3-202ENST00000562722 CLRN3Q8NCR9 226 aa8.34□□□□□ -1.07
SF3B3-202ENST00000562722 MLST8Q9BVC4 326 aa8.34□□□□□ -1.07
SF3B3-202ENST00000562722 SSBP4Q9BWG4 385 aaPredicted RBP8.34□□□□□ -1.07
SF3B3-202ENST00000562722 H7C1H1 209 aa8.33□□□□□ -1.08
SF3B3-202ENST00000562722 IQCJQ1A5X6 159 aa8.33□□□□□ -1.08
SF3B3-202ENST00000562722 SDIM1Q6ZPB5 146 aa8.33□□□□□ -1.08
SF3B3-202ENST00000562722 KCNRGQ8N5I3 272 aa8.33□□□□□ -1.08
SF3B3-202ENST00000562722 AP5S1Q9NUS5 200 aa8.33□□□□□ -1.08
SF3B3-202ENST00000562722 UMAD1C9J7I0 102 aa8.32□□□□□ -1.08
SF3B3-202ENST00000562722 G3V3Q6 166 aa8.32□□□□□ -1.08
SF3B3-202ENST00000562722 SMLR1H3BR10 107 aa8.32□□□□□ -1.08
SF3B3-202ENST00000562722 RAB5CP51148 216 aa8.32□□□□□ -1.08
SF3B3-202ENST00000562722 KRTAP26-1Q6PEX3 210 aa8.32□□□□□ -1.08
SF3B3-202ENST00000562722 TMUB2Q71RG4 321 aa8.32□□□□□ -1.08
SF3B3-202ENST00000562722 MBD3L1Q8WWY6 194 aa8.32□□□□□ -1.08
SF3B3-202ENST00000562722 BATF3Q9NR55 127 aa8.32□□□□□ -1.08
SF3B3-202ENST00000562722 KIF25-AS1Q9Y6Z4 181 aa8.32□□□□□ -1.08
SF3B3-202ENST00000562722 IGHV3-64A0A075B6Q5 118 aa8.31□□□□□ -1.08
SF3B3-202ENST00000562722 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-202ENST00000562722 H2AFB1P0C5Y9 115 aa8.31□□□□□ -1.08
SF3B3-202ENST00000562722 GZMBP10144 247 aa8.31□□□□□ -1.08
SF3B3-202ENST00000562722 RPL35P42766 123 aaKnown RBP8.31□□□□□ -1.08
SF3B3-202ENST00000562722 NKX2-5P52952 324 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-202ENST00000562722 SUMO4Q6EEV6 95 aa8.31□□□□□ -1.08
SF3B3-202ENST00000562722 FER1L6-AS1Q8NA97 138 aa8.31□□□□□ -1.08
SF3B3-202ENST00000562722 TMEM243Q9BU79 118 aa8.31□□□□□ -1.08
SF3B3-202ENST00000562722 TRAV8-4A0A0B4J246 113 aa8.3□□□□□ -1.08
SF3B3-202ENST00000562722 M0QY20 66 aa8.3□□□□□ -1.08
SF3B3-202ENST00000562722 UBE2L6O14933 153 aa8.3□□□□□ -1.08
SF3B3-202ENST00000562722 P01737 135 aa8.3□□□□□ -1.08
SF3B3-202ENST00000562722 CNBPP62633 177 aaKnown RBP8.3□□□□□ -1.08
SF3B3-202ENST00000562722 RPS20P60866 119 aaKnown RBP8.29□□□□□ -1.08
SF3B3-202ENST00000562722 CACNG7P62955 275 aa8.29□□□□□ -1.08
SF3B3-202ENST00000562722 CENPWQ5EE01 88 aa8.29□□□□□ -1.08
SF3B3-202ENST00000562722 WDR73Q6P4I2 378 aa8.29□□□□□ -1.08
SF3B3-202ENST00000562722 Q6ZRU5 148 aa8.29□□□□□ -1.08
SF3B3-202ENST00000562722 C20orf203Q8NBC4 194 aa8.29□□□□□ -1.08
SF3B3-202ENST00000562722 OR2D3Q8NGH3 330 aa8.29□□□□□ -1.08
SF3B3-202ENST00000562722 GNG13Q9P2W3 67 aa8.29□□□□□ -1.08
SF3B3-202ENST00000562722 IGLV4-60A0A075B6I1 120 aa8.28□□□□□ -1.08
SF3B3-202ENST00000562722 KANTRA0A1W2PQU2 76 aa8.28□□□□□ -1.08
SF3B3-202ENST00000562722 CHTF8P0CG12 524 aa8.28□□□□□ -1.08
SF3B3-202ENST00000562722 SULT1A2P50226 295 aa8.28□□□□□ -1.08
SF3B3-202ENST00000562722 ZNF345Q14585 488 aa8.28□□□□□ -1.08
SF3B3-202ENST00000562722 RASL11AQ6T310 242 aa8.28□□□□□ -1.08
SF3B3-202ENST00000562722 DPH3P1Q9H4G8 78 aa8.28□□□□□ -1.08
SF3B3-202ENST00000562722 A0A087WYN8 130 aa8.27□□□□□ -1.09
SF3B3-202ENST00000562722 IGKV3OR2-268A0A0C4DH90 116 aa8.27□□□□□ -1.09
SF3B3-202ENST00000562722 TRGC1P0CF51 173 aa8.27□□□□□ -1.09
SF3B3-202ENST00000562722 IGLC6P0CF74 106 aa8.27□□□□□ -1.09
SF3B3-202ENST00000562722 AMTP48728 403 aa8.27□□□□□ -1.09
SF3B3-202ENST00000562722 CIRBPQ14011 172 aaKnown RBP8.27□□□□□ -1.09
SF3B3-202ENST00000562722 RGS21Q2M5E4 152 aa8.27□□□□□ -1.09
SF3B3-202ENST00000562722 GFRA4Q9GZZ7 299 aa8.27□□□□□ -1.09
SF3B3-202ENST00000562722 MANBALQ9NQG1 85 aa8.27□□□□□ -1.09
SF3B3-202ENST00000562722 A0A1B0GUV1 79 aa8.26□□□□□ -1.09
SF3B3-202ENST00000562722 XKRY2A2RUG3 117 aa8.26□□□□□ -1.09
SF3B3-202ENST00000562722 BCL2L11O43521 198 aa8.26□□□□□ -1.09
SF3B3-202ENST00000562722 MT1HL1P0DM35 61 aa8.26□□□□□ -1.09
SF3B3-202ENST00000562722 GNG4P50150 75 aa8.26□□□□□ -1.09
SF3B3-202ENST00000562722 EIF5AP63241 154 aaKnown RBP8.26□□□□□ -1.09
SF3B3-202ENST00000562722 COTL1Q14019 142 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms