RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 SMLR1H3BR10 107 aa10.78□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 S100A9P06702 114 aaKnown RBP10.78□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 PRSS1P07477 247 aa10.78□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 OR5AL1P0C617 328 aa10.78□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 MIAQ16674 131 aa10.78□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 SERTAD4-AS1Q5TG53 156 aa10.78□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 BAGE2Q86Y30 109 aa10.78□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 SFT2D1Q8WV19 159 aa10.78□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 MBD3L1Q8WWY6 194 aa10.78□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 VAX2Q9UIW0 290 aa10.78□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 KIF25-AS1Q9Y6Z4 181 aa10.78□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 F5H697 171 aa10.77□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 SSTP61278 116 aa10.77□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 SPANXN1Q5VSR9 72 aa10.77□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 KRTAP26-1Q6PEX3 210 aa10.77□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 CLPSL2Q6UWE3 100 aa10.77□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 FAM213BQ8TBF2 198 aa10.77□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 PRR34Q9NV39 138 aa10.77□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 HNRNPA3P51991 378 aaKnown RBP10.76□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 PKIAP61925 76 aa10.76□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 RBX1P62877 108 aa10.76□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.76□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 PFDN1O60925 122 aa10.75□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 RPL37AP61513 92 aaKnown RBP10.75□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 GAGE6Q13070 117 aa10.75□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 LINC00269Q8N2A0 174 aa10.75□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 KCNRGQ8N5I3 272 aa10.75□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 C9orf163Q8N9P6 203 aa10.75□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 DERL1Q9BUN8 251 aa10.75□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.75□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 UMAD1C9J7I0 102 aa10.74□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 PANO1I0J062 215 aa10.74□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 ZNF345Q14585 488 aa10.74□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 TMEM97Q5BJF2 176 aa10.74□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 DGAT2L7PQ6IED9 249 aa10.74□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 DAZAP1Q96EP5 407 aaKnown RBP10.74□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 AP1S3Q96PC3 154 aa10.74□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 TMUB2Q71RG4 321 aa10.73□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 TRBV25-1A0A075B6N4 114 aa10.72□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 SMIM17P0DL12 118 aa10.72□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 RPL35P42766 123 aaKnown RBP10.72□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 IQCJQ1A5X6 159 aa10.72□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 M0QY20 66 aa10.71□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 GZMBP10144 247 aa10.71□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 RGS21Q2M5E4 152 aa10.71□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 SDIM1Q6ZPB5 146 aa10.71□□□□□ -0.69
VPS9D1-AS1-201ENST00000562298 IGLV10-54A0A075B6I4 117 aa10.7□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 IGHV1-24A0A0C4DH33 117 aa10.7□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 H2AFB1P0C5Y9 115 aa10.7□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 IGLC6P0CF74 106 aa10.7□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 REG3AQ06141 175 aa10.7□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 BCL2L11O43521 198 aa10.69□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 MGPP08493 103 aa10.69□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 SUMO4Q6EEV6 95 aa10.69□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 C20orf203Q8NBC4 194 aa10.69□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 C11orf52Q96A22 123 aa10.69□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 TPPP3Q9BW30 176 aa10.69□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 HMSDA8MTL9 139 aa10.68□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 CCL20P78556 96 aa10.68□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 CLRN3Q8NCR9 226 aa10.68□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 PLA2G2DQ9UNK4 145 aa10.68□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 IGLV4-60A0A075B6I1 120 aa10.67□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 KANTRA0A1W2PQU2 76 aa10.67□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 NKX2-5P52952 324 aaPredicted RBP10.67□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 CNBPP62633 177 aaKnown RBP10.67□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 CENPWQ5EE01 88 aa10.67□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 FER1L6-AS1Q8NA97 138 aa10.67□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 GFRA4Q9GZZ7 299 aa10.67□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 A0A0D9SG52 128 aa10.66□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 C19orf71A6NCJ1 209 aa10.66□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 H7C1H1 209 aa10.66□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 CIRBPQ14011 172 aaKnown RBP10.66□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 OR2D3Q8NGH3 330 aa10.66□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 MANBALQ9NQG1 85 aa10.66□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 GNG13Q9P2W3 67 aa10.66□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 A0A1B0GUV1 79 aa10.65□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 hDV102S1A0JD36 115 aa10.65□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 SLPIP03973 132 aa10.65□□□□□ -0.7
VPS9D1-AS1-201ENST00000562298 TRAV8-4A0A0B4J246 113 aa10.64□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 RAB19A4D1S5 217 aa10.64□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 P01737 135 aa10.64□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 MT1HL1P0DM35 61 aa10.64□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 RPS20P60866 119 aaKnown RBP10.64□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 CACNG7P62955 275 aa10.64□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 RASL11AQ6T310 242 aa10.64□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 TMEM243Q9BU79 118 aa10.64□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 RAB5CP51148 216 aa10.63□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 PGLYRP4Q96LB8 373 aa10.63□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 TRBV20OR9-2A0A075B6H5 130 aa10.62□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 TRAV1-1A0A0B4J248 108 aa10.62□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 CHTF8P0CG12 524 aa10.62□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 GNG4P50150 75 aa10.62□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 EIF5AP63241 154 aaKnown RBP10.62□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 LYZL1Q6UWQ5 148 aa10.62□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 IGHV3-64A0A075B6Q5 118 aa10.61□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 F2Z2F3 143 aa10.61□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 SMIM12Q96EX1 92 aa10.61□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 DPH3P1Q9H4G8 78 aa10.61□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 NIT2Q9NQR4 276 aa10.61□□□□□ -0.71
VPS9D1-AS1-201ENST00000562298 A0A087WYN8 130 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms