RNA–Protein interactions for RNA: ENST00000562237.5

UTP4-203, Transcript of UTP4, small subunit processome component, humanhuman

TSL 1 (best)

Gene UTP4, Length 2,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-203ENST00000562237 VPS13CQ709C8 3753 aa14.5□□□□□ -0.09
UTP4-203ENST00000562237 TRGV11A0A075B6L2 103 aa14.5□□□□□ -0.09
UTP4-203ENST00000562237 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.5□□□□□ -0.093e-7■■■■■ 34.1
UTP4-203ENST00000562237 SPTBN4Q9H254 2564 aa14.49□□□□□ -0.09
UTP4-203ENST00000562237 NCOR2Q9Y618 2525 aa14.49□□□□□ -0.09
UTP4-203ENST00000562237 ZNF22P17026 224 aaPredicted RBP14.49□□□□□ -0.09
UTP4-203ENST00000562237 SYNJ2BPP57105 145 aa14.49□□□□□ -0.09
UTP4-203ENST00000562237 DSCR9P59020 149 aa14.49□□□□□ -0.09
UTP4-203ENST00000562237 SFTA2Q6UW10 78 aa14.49□□□□□ -0.09
UTP4-203ENST00000562237 SBSPONQ8IVN8 264 aa14.49□□□□□ -0.09
UTP4-203ENST00000562237 PRO1854Q9UHT4 67 aa14.49□□□□□ -0.09
UTP4-203ENST00000562237 IGLV4-3A0A075B6K6 122 aa14.49□□□□□ -0.09
UTP4-203ENST00000562237 RHODO00212 210 aa14.49□□□□□ -0.09
UTP4-203ENST00000562237 TCL1BO95988 128 aa14.49□□□□□ -0.09
UTP4-203ENST00000562237 ITPR1Q14643 2758 aa14.46□□□□□ -0.09
UTP4-203ENST00000562237 PYGO1Q9Y3Y4 419 aa14.46□□□□□ -0.09
UTP4-203ENST00000562237 ELANEP08246 267 aa14.46□□□□□ -0.1
UTP4-203ENST00000562237 LINC01356Q8N9X3 169 aa14.46□□□□□ -0.1
UTP4-203ENST00000562237 VCX2Q9H322 139 aa14.46□□□□□ -0.1
UTP4-203ENST00000562237 CHD8Q9HCK8 2581 aa14.45□□□□□ -0.1
UTP4-203ENST00000562237 A0A0J9YXV3 536 aa14.45□□□□□ -0.1
UTP4-203ENST00000562237 RBMY1A1P0DJD3 496 aaKnown RBP14.45□□□□□ -0.1
UTP4-203ENST00000562237 RBMY1CP0DJD4 496 aa14.45□□□□□ -0.1
UTP4-203ENST00000562237 RBMY1FQ15415 496 aaKnown RBP14.45□□□□□ -0.1
UTP4-203ENST00000562237 ZNF418Q8TF45 676 aaPredicted RBP14.45□□□□□ -0.1
UTP4-203ENST00000562237 A4D1N5 150 aa14.44□□□□□ -0.1
UTP4-203ENST00000562237 HOXD3P31249 432 aaPredicted RBP14.44□□□□□ -0.1
UTP4-203ENST00000562237 TEN1Q86WV5 123 aa14.44□□□□□ -0.1
UTP4-203ENST00000562237 FAM104AQ969W3 186 aa14.44□□□□□ -0.1
UTP4-203ENST00000562237 DOPEY2Q9Y3R5 2298 aa14.44□□□□□ -0.1
UTP4-203ENST00000562237 A8MTW9 85 aa14.44□□□□□ -0.1
UTP4-203ENST00000562237 EIF4EBP3O60516 100 aaPredicted RBP14.44□□□□□ -0.1
UTP4-203ENST00000562237 CRYBA4P53673 196 aa14.44□□□□□ -0.1
UTP4-203ENST00000562237 UBE2E2Q96LR5 201 aa14.44□□□□□ -0.1
UTP4-203ENST00000562237 A0A0B4J2C4 111 aa14.43□□□□□ -0.1
UTP4-203ENST00000562237 J3QLI3 93 aa14.43□□□□□ -0.1
UTP4-203ENST00000562237 TMEM263Q8WUH6 116 aaKnown RBP14.43□□□□□ -0.1
UTP4-203ENST00000562237 PPDPFLQ8WWR9 84 aa14.43□□□□□ -0.1
UTP4-203ENST00000562237 A0A096LNT2 108 aa14.43□□□□□ -0.1
UTP4-203ENST00000562237 CARD19Q96LW7 228 aa14.43□□□□□ -0.1
UTP4-203ENST00000562237 CDIP1Q9H305 208 aa14.43□□□□□ -0.1
UTP4-203ENST00000562237 CSPG4Q6UVK1 2322 aa14.42□□□□□ -0.1
UTP4-203ENST00000562237 M0R2P5 195 aa14.42□□□□□ -0.1
UTP4-203ENST00000562237 IGHV3-33P01772 117 aa14.42□□□□□ -0.1
UTP4-203ENST00000562237 PTH2Q96A98 100 aa14.42□□□□□ -0.1
UTP4-203ENST00000562237 DUX5Q96PT3 197 aa14.42□□□□□ -0.1
UTP4-203ENST00000562237 MRPS36P82909 103 aaKnown RBP14.41□□□□□ -0.1
UTP4-203ENST00000562237 VPREB3Q9UKI3 123 aa14.41□□□□□ -0.1
UTP4-203ENST00000562237 ZNF702PQ9H963 129 aa14.41□□□□□ -0.1
UTP4-203ENST00000562237 A8MWV9 139 aa14.4□□□□□ -0.1
UTP4-203ENST00000562237 PIK3CD-AS1Q5SR53 167 aa14.4□□□□□ -0.1
UTP4-203ENST00000562237 MUSTN1Q8IVN3 82 aa14.4□□□□□ -0.1
UTP4-203ENST00000562237 TCTEX1D4Q5JR98 221 aa14.4□□□□□ -0.1
UTP4-203ENST00000562237 Q5PR19 223 aa14.4□□□□□ -0.1
UTP4-203ENST00000562237 IGHV3-64A0A075B6Q5 118 aa14.39□□□□□ -0.11
UTP4-203ENST00000562237 TRAV2A0A0B4J234 112 aa14.39□□□□□ -0.11
UTP4-203ENST00000562237 A0A0J9YXY3 114 aa14.39□□□□□ -0.11
UTP4-203ENST00000562237 M0QXV9 152 aa14.39□□□□□ -0.11
UTP4-203ENST00000562237 SCGB1C2P0DMR2 95 aa14.39□□□□□ -0.11
UTP4-203ENST00000562237 SPG11Q96JI7 2443 aa14.39□□□□□ -0.11
UTP4-203ENST00000562237 KNCNA6PVL3 124 aa14.39□□□□□ -0.11
UTP4-203ENST00000562237 IGHV3-30-3P0DP02 117 aa14.39□□□□□ -0.11
UTP4-203ENST00000562237 NRGNQ92686 78 aa14.39□□□□□ -0.11
UTP4-203ENST00000562237 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.38□□□□□ -0.11
UTP4-203ENST00000562237 CD28P10747 220 aa14.38□□□□□ -0.11
UTP4-203ENST00000562237 FHL3Q13643 280 aa14.38□□□□□ -0.11
UTP4-203ENST00000562237 ERG28Q9UKR5 140 aa14.38□□□□□ -0.11
UTP4-203ENST00000562237 SORL1Q92673 2214 aa14.37□□□□□ -0.11
UTP4-203ENST00000562237 CIDEAO60543 219 aa14.37□□□□□ -0.11
UTP4-203ENST00000562237 FSHBP01225 129 aa14.37□□□□□ -0.11
UTP4-203ENST00000562237 PROK1P58294 105 aa14.37□□□□□ -0.11
UTP4-203ENST00000562237 Q6YL49 198 aa14.37□□□□□ -0.11
UTP4-203ENST00000562237 RAX2Q96IS3 184 aa14.37□□□□□ -0.11
UTP4-203ENST00000562237 NACAE9PAV3 2078 aa14.37□□□□□ -0.11
UTP4-203ENST00000562237 H3BMM0 161 aa14.37□□□□□ -0.11
UTP4-203ENST00000562237 LITAFQ99732 161 aa14.37□□□□□ -0.11
UTP4-203ENST00000562237 DEFB131AP59861 70 aa14.36□□□□□ -0.11
UTP4-203ENST00000562237 TIMM21Q9BVV7 248 aa14.36□□□□□ -0.11
UTP4-203ENST00000562237 TNFRSF18Q9Y5U5 241 aa14.36□□□□□ -0.11
UTP4-203ENST00000562237 COL12A1Q99715 3063 aa14.36□□□□□ -0.11
UTP4-203ENST00000562237 IGHV3-73A0A0B4J1V6 119 aa14.36□□□□□ -0.11
UTP4-203ENST00000562237 RBMY1BA6NDE4 496 aaKnown RBP14.36□□□□□ -0.11
UTP4-203ENST00000562237 RBMY1EA6NEQ0 496 aaKnown RBP14.36□□□□□ -0.11
UTP4-203ENST00000562237 TGFAP01135 160 aa14.36□□□□□ -0.11
UTP4-203ENST00000562237 RBMY1DP0C7P1 496 aaKnown RBP14.36□□□□□ -0.11
UTP4-203ENST00000562237 SPXQ9BT56 116 aa14.36□□□□□ -0.11
UTP4-203ENST00000562237 ANKRD29Q8N6D5 301 aa14.35□□□□□ -0.11
UTP4-203ENST00000562237 IGHV1-58A0A0C4DH39 117 aa14.34□□□□□ -0.11
UTP4-203ENST00000562237 CHCHD7Q9BUK0 85 aa14.34□□□□□ -0.11
UTP4-203ENST00000562237 DOPEY1Q5JWR5 2465 aa14.34□□□□□ -0.11
UTP4-203ENST00000562237 SPANXA1Q9NS26 97 aa14.34□□□□□ -0.11
UTP4-203ENST00000562237 A0A1B0GV72 72 aa14.33□□□□□ -0.11
UTP4-203ENST00000562237 SLC25A20O43772 301 aa14.33□□□□□ -0.11
UTP4-203ENST00000562237 HTN1P15515 57 aa14.33□□□□□ -0.11
UTP4-203ENST00000562237 CEMP1Q6PRD7 247 aaPredicted RBP14.33□□□□□ -0.11
UTP4-203ENST00000562237 DUX3Q96PT4 197 aa14.33□□□□□ -0.11
UTP4-203ENST00000562237 TINCRA0A1B0GVN0 87 aa14.33□□□□□ -0.12
UTP4-203ENST00000562237 SLURP1P55000 103 aa14.33□□□□□ -0.12
UTP4-203ENST00000562237 ZNF415Q09FC8 603 aa14.33□□□□□ -0.12
UTP4-203ENST00000562237 Q6ZSN1 163 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms