RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 PRR15Q8IV56 129 aa1.06□□□□□ -2.24
DENND4A-204ENST00000562028 OR8D4Q8NGM9 314 aa1.06□□□□□ -2.24
DENND4A-204ENST00000562028 C1orf54Q8WWF1 131 aa1.06□□□□□ -2.24
DENND4A-204ENST00000562028 SLAMF6Q96DU3 332 aa1.06□□□□□ -2.24
DENND4A-204ENST00000562028 CCDC115Q96NT0 180 aa1.06□□□□□ -2.24
DENND4A-204ENST00000562028 HIST1H2BLQ99880 126 aa1.06□□□□□ -2.24
DENND4A-204ENST00000562028 LINC00467Q9BRT7 94 aa1.06□□□□□ -2.24
DENND4A-204ENST00000562028 TMEM133Q9H2Q1 129 aa1.06□□□□□ -2.24
DENND4A-204ENST00000562028 TPT1P8Q9HAU6 139 aa1.06□□□□□ -2.24
DENND4A-204ENST00000562028 OSTCQ9NRP0 149 aa1.06□□□□□ -2.24
DENND4A-204ENST00000562028 COPZ2Q9P299 210 aa1.06□□□□□ -2.24
DENND4A-204ENST00000562028 ZFP30Q9Y2G7 519 aa1.06□□□□□ -2.24
DENND4A-204ENST00000562028 ASB4Q9Y574 426 aa1.06□□□□□ -2.24
DENND4A-204ENST00000562028 ALMS1Q8TCU4 4167 aa1.06□□□□□ -2.24
DENND4A-204ENST00000562028 USF3Q68DE3 2245 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 MYCBP2O75592 4640 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 TRAV36DV7A0A075B6V5 113 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 ARPC5O15511 151 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 CST8O60676 142 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 LY6G6CO95867 125 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 SCTP09683 121 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 NFYBP25208 207 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 POLR2HP52434 150 aaKnown RBP1.05□□□□□ -2.24
DENND4A-204ENST00000562028 LSM3P62310 102 aaKnown RBP1.05□□□□□ -2.24
DENND4A-204ENST00000562028 LTC4SQ16873 150 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 SMIM21Q3B7S5 101 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 KRTAP20-1Q3LI63 56 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 MORN2Q502X0 79 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 C1orf140Q5VVS0 124 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 OR8I2Q8N0Y5 310 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 EXOC3-AS1Q8N2X6 119 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 Q8N814 137 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 TMEM229BQ8NBD8 167 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 OR2T10Q8NGZ9 312 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 SFT2D1Q8WV19 159 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 MCEEQ96PE7 176 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 GPX7Q96SL4 187 aaPredicted RBP1.05□□□□□ -2.24
DENND4A-204ENST00000562028 CCL19Q99731 98 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 SLC25A21Q9BQT8 299 aaPredicted RBP1.05□□□□□ -2.24
DENND4A-204ENST00000562028 LXNQ9BS40 222 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 FAM107BQ9H098 131 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 PCTPQ9UKL6 214 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 MED31Q9Y3C7 131 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 NUP210Q8TEM1 1887 aaPredicted RBP1.05□□□□□ -2.24
DENND4A-204ENST00000562028 MYH8P13535 1937 aa1.05□□□□□ -2.24
DENND4A-204ENST00000562028 SYNE2Q8WXH0 6885 aaKnown RBP1.04□□□□□ -2.24
DENND4A-204ENST00000562028 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 HSPG2P98160 4391 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 SRRM2Q9UQ35 2752 aaKnown RBP1.04□□□□□ -2.24
DENND4A-204ENST00000562028 KNTC1P50748 2209 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 TRAV12-1A0A0B4J245 112 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 TRBV7-6A0A0J9YX20 115 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 TRDV1A0A1B0GX56 115 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 C1orf196B1AJZ1 125 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 K7EIL1 84 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 M0R2N4 97 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 M0R378 163 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 HIST1H2BKO60814 126 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 LYZL6O75951 148 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 DPM2O94777 84 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 HIST1H2BJP06899 126 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 MGST1P10620 155 aaKnown RBP1.04□□□□□ -2.24
DENND4A-204ENST00000562028 COX4I1P13073 169 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 EVI2AP22794 236 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 SDC2P34741 201 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 RPL35P42766 123 aaKnown RBP1.04□□□□□ -2.24
DENND4A-204ENST00000562028 CKS1BP61024 79 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 OR8B8Q15620 311 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 MSMO1Q15800 293 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 RNASE10Q5GAN6 216 aaKnown RBP1.04□□□□□ -2.24
DENND4A-204ENST00000562028 EIF5AL1Q6IS14 154 aaKnown RBP1.04□□□□□ -2.24
DENND4A-204ENST00000562028 PHF5AQ7RTV0 110 aaKnown RBP1.04□□□□□ -2.24
DENND4A-204ENST00000562028 OR5D16Q8NGK9 328 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 BORCS8Q96FH0 119 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 CGREF1Q99674 301 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 OR2H1Q9GZK4 316 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 POPDC3Q9HBV1 291 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 HS3ST2Q9Y278 367 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 DENND4CQ5VZ89 1909 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 PLIN4Q96Q06 1357 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 DNAH9Q9NYC9 4486 aa1.04□□□□□ -2.24
DENND4A-204ENST00000562028 PLECQ15149 4684 aaKnown RBP1.03□□□□□ -2.24
DENND4A-204ENST00000562028 MYO7BQ6PIF6 2116 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 DNAH10Q8IVF4 4471 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 ABCA1O95477 2261 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 KNL1Q8NG31 2342 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.03□□□□□ -2.24
DENND4A-204ENST00000562028 IGHV1-58A0A0C4DH39 117 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 A8MWV9 139 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 J3QR89 54 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 PROSCO94903 275 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 MPC1LP0DKB6 136 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 CMPK1P30085 196 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 SRIP30626 198 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 S100A11P31949 105 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 DYNLT3P51808 116 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 DEFA3P59666 94 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 PSPHP78330 225 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 TFF3Q07654 80 aa1.03□□□□□ -2.24
DENND4A-204ENST00000562028 TCTE3Q8IZS6 198 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms