RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 IGFL3Q6UXB1 125 aa7.84□□□□□ -1.15
GTF3C1-202ENST00000561623 SLURP1P55000 103 aa7.84□□□□□ -1.15
GTF3C1-202ENST00000561623 C9orf47Q6ZRZ4 202 aa7.84□□□□□ -1.16
GTF3C1-202ENST00000561623 H3BUA1 57 aa7.83□□□□□ -1.16
GTF3C1-202ENST00000561623 P0C879 139 aa7.83□□□□□ -1.16
GTF3C1-202ENST00000561623 RPL18AQ02543 176 aaKnown RBP7.83□□□□□ -1.16
GTF3C1-202ENST00000561623 LY6G6DO95868 133 aa7.83□□□□□ -1.16
GTF3C1-202ENST00000561623 BRWD1-AS2P59051 145 aa7.83□□□□□ -1.16
GTF3C1-202ENST00000561623 PRR4Q16378 134 aa7.83□□□□□ -1.16
GTF3C1-202ENST00000561623 ESM1Q9NQ30 184 aa7.83□□□□□ -1.16
GTF3C1-202ENST00000561623 TNCP24821 2201 aa7.82□□□□□ -1.16
GTF3C1-202ENST00000561623 IGHV3-30-3P0DP02 117 aa7.82□□□□□ -1.16
GTF3C1-202ENST00000561623 IGKV2D-26A0A0A0MRZ7 120 aa7.82□□□□□ -1.16
GTF3C1-202ENST00000561623 PIP4P1Q86T03 277 aa7.82□□□□□ -1.16
GTF3C1-202ENST00000561623 VSIG2Q96IQ7 327 aa7.82□□□□□ -1.16
GTF3C1-202ENST00000561623 MED13Q9UHV7 2174 aa7.82□□□□□ -1.16
GTF3C1-202ENST00000561623 NOTCH4Q99466 2003 aa7.82□□□□□ -1.16
GTF3C1-202ENST00000561623 TRAV23DV6A0A075B6W5 121 aa7.82□□□□□ -1.16
GTF3C1-202ENST00000561623 BLCAPP62952 87 aa7.82□□□□□ -1.16
GTF3C1-202ENST00000561623 MAPKAPK5-AS1Q8N8E1 139 aa7.82□□□□□ -1.16
GTF3C1-202ENST00000561623 MALRD1Q5VYJ5 2156 aa7.82□□□□□ -1.16
GTF3C1-202ENST00000561623 IGHV1-58A0A0C4DH39 117 aa7.82□□□□□ -1.16
GTF3C1-202ENST00000561623 ELANEP08246 267 aa7.82□□□□□ -1.16
GTF3C1-202ENST00000561623 VPREB3Q9UKI3 123 aa7.82□□□□□ -1.16
GTF3C1-202ENST00000561623 TRBV6-1A0A0K0K1D8 114 aa7.81□□□□□ -1.16
GTF3C1-202ENST00000561623 MIR7-3HGQ8N6C7 128 aa7.81□□□□□ -1.16
GTF3C1-202ENST00000561623 SDIM1Q6ZPB5 146 aa7.81□□□□□ -1.16
GTF3C1-202ENST00000561623 MBD6Q96DN6 1003 aa7.81□□□□□ -1.16
GTF3C1-202ENST00000561623 MDFICQ9P1T7 246 aa7.81□□□□□ -1.16
GTF3C1-202ENST00000561623 SPG11Q96JI7 2443 aa7.81□□□□□ -1.16
GTF3C1-202ENST00000561623 IGHV4OR15-8A0A075B7B6 117 aa7.81□□□□□ -1.16
GTF3C1-202ENST00000561623 A0A087WW49 117 aa7.81□□□□□ -1.16
GTF3C1-202ENST00000561623 Q8N9W7 124 aa7.81□□□□□ -1.16
GTF3C1-202ENST00000561623 NCKAP5O14513 1909 aa7.81□□□□□ -1.16
GTF3C1-202ENST00000561623 IGHV4-38-2P0DP08 117 aa7.81□□□□□ -1.16
GTF3C1-202ENST00000561623 IGLC6P0CF74 106 aa7.8□□□□□ -1.16
GTF3C1-202ENST00000561623 GYPEP15421 78 aa7.8□□□□□ -1.16
GTF3C1-202ENST00000561623 FUSP35637 526 aaKnown RBP eCLIP7.8□□□□□ -1.16
GTF3C1-202ENST00000561623 CRIP3Q6Q6R5 217 aa7.8□□□□□ -1.16
GTF3C1-202ENST00000561623 NREPQ16612 68 aa7.8□□□□□ -1.16
GTF3C1-202ENST00000561623 LINC00643Q86TS7 51 aa7.8□□□□□ -1.16
GTF3C1-202ENST00000561623 DEFB4AO15263 64 aa7.8□□□□□ -1.16
GTF3C1-202ENST00000561623 TANC1Q9C0D5 1861 aa7.8□□□□□ -1.16
GTF3C1-202ENST00000561623 A0A0J9YXY3 114 aa7.8□□□□□ -1.16
GTF3C1-202ENST00000561623 WT1P19544 449 aaPredicted RBP7.8□□□□□ -1.16
GTF3C1-202ENST00000561623 ATP5G1P05496 136 aa7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 DAZ2Q13117 558 aaKnown RBP7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 DAZ4Q86SG3 579 aaKnown RBP7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 DAZ3Q9NR90 486 aaKnown RBP7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 PKIGQ9Y2B9 76 aa7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 A0A0U1RQV1 116 aa7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 MIAQ16674 131 aa7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 WFDC11Q8NEX6 87 aa7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 TM2D2Q9BX73 214 aa7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 COX7A2LO14548 114 aa7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 PRORYQ9H606 182 aa7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 P0DMU3 169 aa7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 FAM231AP0DMU4 169 aa7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 FAM231CP0DMU5 169 aa7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 C1orf229Q6ZS94 237 aaPredicted RBP7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 C20orf203Q8NBC4 194 aa7.79□□□□□ -1.16
GTF3C1-202ENST00000561623 PROP1O75360 226 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 CUL9Q8IWT3 2517 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 IGLV2-18A0A075B6J9 118 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 MSMPQ1L6U9 139 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 TRBV12-3P01733 135 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 SPART-AS1P0CW21 52 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 CAMK2N2Q96S95 79 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 JMJD7-PLA2G4BH0Y9G9 81 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 MLST8Q9BVC4 326 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 WNK1Q9H4A3 2382 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 TRBV7-3A0A075B6L6 115 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 FSHBP01225 129 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 IGHV3-30P01768 117 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 IGHV3-33P01772 117 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 IGHV3-30-5P0DP03 117 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 UNQ9165/PRO28630Q6UXU0 137 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 C5orf56Q8N8D9 126 aa7.78□□□□□ -1.16
GTF3C1-202ENST00000561623 IGHV4-61A0A0C4DH41 118 aa7.77□□□□□ -1.17
GTF3C1-202ENST00000561623 ETDCA0A1B0GVM5 59 aa7.77□□□□□ -1.17
GTF3C1-202ENST00000561623 MED14OSP0DP75 135 aa7.77□□□□□ -1.17
GTF3C1-202ENST00000561623 C2orf91Q6ZV80 131 aa7.77□□□□□ -1.17
GTF3C1-202ENST00000561623 NEXN-AS1Q8NBZ9 246 aa7.77□□□□□ -1.17
GTF3C1-202ENST00000561623 PCNX2A6NKB5 2137 aa7.77□□□□□ -1.17
GTF3C1-202ENST00000561623 Q8N7P7 452 aa7.77□□□□□ -1.17
GTF3C1-202ENST00000561623 UPK3BQ9BT76 320 aa7.77□□□□□ -1.17
GTF3C1-202ENST00000561623 IGLV1-47P01700 117 aa7.77□□□□□ -1.17
GTF3C1-202ENST00000561623 DEFB135Q30KP9 77 aa7.77□□□□□ -1.17
GTF3C1-202ENST00000561623 C20orf197Q8N268 126 aa7.76□□□□□ -1.17
GTF3C1-202ENST00000561623 UQCRQO14949 82 aa7.76□□□□□ -1.17
GTF3C1-202ENST00000561623 TIRAPP58753 221 aa7.76□□□□□ -1.17
GTF3C1-202ENST00000561623 C11orf45Q8TAV5 145 aa7.76□□□□□ -1.17
GTF3C1-202ENST00000561623 C16orf74Q96GX8 76 aa7.76□□□□□ -1.17
GTF3C1-202ENST00000561623 HILS1P60008 231 aa7.76□□□□□ -1.17
GTF3C1-202ENST00000561623 MP68P56378 58 aa7.75□□□□□ -1.17
GTF3C1-202ENST00000561623 C3orf22Q8N5N4 141 aa7.75□□□□□ -1.17
GTF3C1-202ENST00000561623 UBE2D1P51668 147 aa7.75□□□□□ -1.17
GTF3C1-202ENST00000561623 MRPL55Q7Z7F7 128 aaKnown RBP7.75□□□□□ -1.17
GTF3C1-202ENST00000561623 MED13LQ71F56 2210 aa7.75□□□□□ -1.17
GTF3C1-202ENST00000561623 DSCAML1Q8TD84 2053 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms