RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ZNF738Q8NE65 137 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 DTD1Q8TEA8 209 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 ACY3Q96HD9 319 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 YPEL4Q96NS1 127 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 TP53RKQ96S44 253 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 SHANK2-AS3Q9BTD1 123 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 PBDC1Q9BVG4 233 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 MRPL32Q9BYC8 188 aaKnown RBP2.01□□□□□ -2.09
HERC1-215ENST00000561436 SRRQ9GZT4 340 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 Q9H521 79 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 HHLA3Q9XRX5 114 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 C14orf166Q9Y224 244 aaKnown RBP2.01□□□□□ -2.09
HERC1-215ENST00000561436 PRELID1Q9Y255 219 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 PXMP4Q9Y6I8 212 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 DNAH6Q9C0G6 4158 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 RNF213Q63HN8 5207 aa2.01□□□□□ -2.09
HERC1-215ENST00000561436 TRAV8-3A0A0A6YYJ7 113 aa2□□□□□ -2.09
HERC1-215ENST00000561436 TRAV8-2A0A0B4J237 113 aa2□□□□□ -2.09
HERC1-215ENST00000561436 A0A0J9YY99 117 aa2□□□□□ -2.09
HERC1-215ENST00000561436 CRYM-AS1A6NIL9 109 aa2□□□□□ -2.09
HERC1-215ENST00000561436 C9JCJ5 164 aa2□□□□□ -2.09
HERC1-215ENST00000561436 H3BRN7 92 aa2□□□□□ -2.09
HERC1-215ENST00000561436 M0R2Z0 102 aa2□□□□□ -2.09
HERC1-215ENST00000561436 SMR3BP02814 79 aaPredicted RBP2□□□□□ -2.09
HERC1-215ENST00000561436 CRYGDP07320 174 aa2□□□□□ -2.09
HERC1-215ENST00000561436 PFN1P07737 140 aaKnown RBP2□□□□□ -2.09
HERC1-215ENST00000561436 SRIP30626 198 aa2□□□□□ -2.09
HERC1-215ENST00000561436 CRYBA4P53673 196 aa2□□□□□ -2.09
HERC1-215ENST00000561436 TCL1AP56279 114 aa2□□□□□ -2.09
HERC1-215ENST00000561436 HIST1H1AQ02539 215 aaPredicted RBP2□□□□□ -2.09
HERC1-215ENST00000561436 ZNF90Q03938 601 aa2□□□□□ -2.09
HERC1-215ENST00000561436 FA2HQ7L5A8 372 aa2□□□□□ -2.09
HERC1-215ENST00000561436 BAP18Q8IXM2 172 aa2□□□□□ -2.09
HERC1-215ENST00000561436 SELENOHQ8IZQ5 122 aaKnown RBP2□□□□□ -2.09
HERC1-215ENST00000561436 C12orf45Q8N5I9 185 aaPredicted RBP2□□□□□ -2.09
HERC1-215ENST00000561436 TMEM229BQ8NBD8 167 aa2□□□□□ -2.09
HERC1-215ENST00000561436 C1orf64Q8NEQ6 169 aa2□□□□□ -2.09
HERC1-215ENST00000561436 OR5H6Q8NGV6 325 aa2□□□□□ -2.09
HERC1-215ENST00000561436 AP3S1Q92572 193 aa2□□□□□ -2.09
HERC1-215ENST00000561436 PRRT1Q99946 306 aa2□□□□□ -2.09
HERC1-215ENST00000561436 GGACTQ9BVM4 153 aa2□□□□□ -2.09
HERC1-215ENST00000561436 NAA60Q9H7X0 242 aa2□□□□□ -2.09
HERC1-215ENST00000561436 FUT9Q9Y231 359 aa2□□□□□ -2.09
HERC1-215ENST00000561436 HIGD1AQ9Y241 93 aa2□□□□□ -2.09
HERC1-215ENST00000561436 TRAV12-2A0A075B6T6 113 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 TRAV8-1A0A0A6YYK1 113 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 IGKV2-24A0A0C4DH68 120 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 LOC389332A0A1B0GUA5 103 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 FABP12A6NFH5 140 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 FAM25EA8MYX2 175 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 DISC1C4P0D8 188 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 K7EN84 100 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 COX7A2P2O60397 106 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 PITX3O75364 302 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 SCGB1C2P0DMR2 95 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 HTN1P15515 57 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 TGFBR1P36897 503 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 TAS2R30P59541 319 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 IL15RAQ13261 267 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 PDE6HQ13956 83 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 SPINK9Q5DT21 86 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 BPIFA4PQ86YQ2 179 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 EIF4E3Q8N5X7 224 aaKnown RBP1.99□□□□□ -2.09
HERC1-215ENST00000561436 OR13C8Q8NGS7 320 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 SCGB1C1Q8TD33 95 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 ZNF431Q8TF32 576 aaPredicted RBP1.99□□□□□ -2.09
HERC1-215ENST00000561436 PTH2Q96A98 100 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 ANAPC13Q9BS18 74 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 RTBDNQ9BSG5 229 aaPredicted RBP1.99□□□□□ -2.09
HERC1-215ENST00000561436 SLC25A31Q9H0C2 315 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 SND1-IT1Q9HBX3 110 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 NPVFQ9HCQ7 196 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 SCP2D1Q9UJQ7 156 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 TRAPPC1Q9Y5R8 145 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 MUC4Q99102 2169 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 LRP1BQ9NZR2 4599 aa1.99□□□□□ -2.09
HERC1-215ENST00000561436 A0A087WWC5 75 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 TRGV1A0A0A0MS02 117 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 TRGV4A0A0C4DH28 118 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 TRBV6-4A0A1B0GX49 114 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 C7orf71A4D174 169 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 MEIS3P1A6NDR6 274 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 K7ERS5 55 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 SYNGR2O43760 224 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 CD3DP04234 171 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 IL5P05113 134 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 OR4E1P0C645 316 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 HIST1H1EP10412 219 aaKnown RBP1.98□□□□□ -2.09
HERC1-215ENST00000561436 ORM2P19652 201 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 AQP4P55087 323 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 KRTAP10-4P60372 401 aaPredicted RBP1.98□□□□□ -2.09
HERC1-215ENST00000561436 RAB31Q13636 194 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 ELOBQ15370 118 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 LELP1Q5T871 98 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 CYP2G1PQ6ZSU1 146 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 Q6ZTI0 123 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 ATP6V0E2Q8NHE4 81 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 DYNC2LI1Q8TCX1 351 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 BLNKQ8WV28 456 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 PRADC1Q9BSG0 188 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms