RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	ATP5E	P56381	51 aa	Predicted RBP	3.02	□□□□□ -1.93
TCF12-223	ENST00000561235	SERF2	P84101	59 aa		3.02	□□□□□ -1.93
TCF12-223	ENST00000561235	SLC38A11	Q08AI6	406 aa		3.02	□□□□□ -1.93
TCF12-223	ENST00000561235	DIAPH2-AS1	Q14236	149 aa		3.02	□□□□□ -1.93
TCF12-223	ENST00000561235	ZNF141	Q15928	474 aa		3.02	□□□□□ -1.93
TCF12-223	ENST00000561235	FAM222A	Q5U5X8	452 aa		3.02	□□□□□ -1.93
TCF12-223	ENST00000561235		Q6ZRU5	148 aa		3.02	□□□□□ -1.93
TCF12-223	ENST00000561235		Q6ZS49	121 aa		3.02	□□□□□ -1.93
TCF12-223	ENST00000561235	VN1R4	Q7Z5H5	301 aa		3.02	□□□□□ -1.93
TCF12-223	ENST00000561235	MSRB3	Q8IXL7	192 aa		3.02	□□□□□ -1.93
TCF12-223	ENST00000561235	RNASE7	Q9H1E1	156 aa	Known RBP	3.02	□□□□□ -1.93
TCF12-223	ENST00000561235	C21orf62	Q9NYP8	219 aa		3.02	□□□□□ -1.93
TCF12-223	ENST00000561235	RBM12B-AS1	Q9P1G2	102 aa		3.02	□□□□□ -1.93
TCF12-223	ENST00000561235	LY96	Q9Y6Y9	160 aa		3.02	□□□□□ -1.93
TCF12-223	ENST00000561235	OBSL1	O75147	1896 aa		3.02	□□□□□ -1.93
TCF12-223	ENST00000561235	MYOF	Q9NZM1	2061 aa		3.02	□□□□□ -1.93
TCF12-223	ENST00000561235	ABCA4	P78363	2273 aa		3.02	□□□□□ -1.93
TCF12-223	ENST00000561235	MXRA5	Q9NR99	2828 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	IGLV3-12	A0A075B6K2	115 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	TRAV26-2	A0A0B4J265	109 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	TRBV7-6	A0A0J9YX20	115 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	FAM236D	A0A1B0GTK5	79 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	SPRR5	A0A1B0GTR4	108 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	LOC107986453	A0A1B0GWG9	222 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235		A8MWV9	139 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	FAM236C	P0DP71	79 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	COX7C	P15954	63 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	ZNF708	P17019	499 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	MP68	P56378	58 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	CAV3	P56539	151 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	ZNF791	Q3KP31	576 aa	Predicted RBP	3.01	□□□□□ -1.93
TCF12-223	ENST00000561235		Q5XG85	94 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	IGFL1	Q6UW32	110 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	LINC00596	Q86U02	117 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	FAM213B	Q8TBF2	198 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	LMX1A	Q8TE12	382 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	CHCHD1	Q96BP2	118 aa	Known RBP	3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	RMI2	Q96E14	147 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	SLC25A44	Q96H78	314 aa	Predicted RBP	3.01	□□□□□ -1.93
TCF12-223	ENST00000561235		S4R3C0	116 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	VPS13C	Q709C8	3753 aa		3.01	□□□□□ -1.93
TCF12-223	ENST00000561235	POLE	Q07864	2286 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	RP1	P56715	2156 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	ANAPC1	Q9H1A4	1944 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	IGHV3-49	A0A0A0MS15	119 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	IGKV6-21	A0A0C4DH24	114 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	LOC107984640	A0A0U1RRK4	108 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	LY6L	H3BQJ8	138 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	LGALS9	O00182	355 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	IGLV2-8	P01709	118 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	GYPB	P06028	91 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	FOXA3	P55318	350 aa	Predicted RBP	3	□□□□□ -1.93
TCF12-223	ENST00000561235	QRFP	P83859	136 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	RTL8B	Q17RB0	113 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	C12orf74	Q32Q52	190 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	NMS	Q5H8A3	153 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	CFAP126	Q5VTH2	177 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	C22orf39	Q6P5X5	142 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	HRCT1	Q6UXD1	115 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	TRAPPC6B	Q86SZ2	158 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	PRR15	Q8IV56	129 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	C20orf78	Q9BR46	151 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	FAM60A	Q9NP50	221 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	LINC00527	Q9UJ94	153 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	PKIG	Q9Y2B9	76 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	SERP1	Q9Y6X1	66 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	PLXNA2	O75051	1894 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	TRPM6	Q9BX84	2022 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	MEGF8	Q7Z7M0	2845 aa		3	□□□□□ -1.93
TCF12-223	ENST00000561235	TRAV8-1	A0A0A6YYK1	113 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	IZUMO1R	A6ND01	250 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235		A8MUU9	505 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	LYZL6	O75951	148 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	IGLV3-19	P01714	112 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	CBLN1	P23435	193 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	S100A3	P33764	101 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	CMC4	P56277	68 aa	Predicted RBP	2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	NPC2	P61916	151 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	ZNF117	Q03924	483 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	WFDC2	Q14508	124 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	NOXRED1	Q6NXP6	359 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	UNQ9165/PRO28630	Q6UXU0	137 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	PRNT	Q86SH4	94 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	LHFPL1	Q86WI0	220 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	SBSPON	Q8IVN8	264 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	AMN1	Q8IY45	258 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	SLC25A29	Q8N8R3	303 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	OR8A1	Q8NGG7	326 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	ZNF563	Q8TA94	476 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	BORCS8	Q96FH0	119 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	AGPAT4-IT1	Q9H0P7	198 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	CXCL16	Q9H2A7	254 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	CKLF	Q9UBR5	152 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	TAC3	Q9UHF0	121 aa		2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	EPPK1	P58107	5090 aa	Known RBP	2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	ANK3	Q12955	4377 aa	Known RBP	2.99	□□□□□ -1.93
TCF12-223	ENST00000561235	MAP1A	P78559	2803 aa	Predicted RBP	2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	2.98	□□□□□ -1.93	6e-6	■■■■□ 22.8
TCF12-223	ENST00000561235	PRRC2C	Q9Y520	2896 aa	Known RBP	2.98	□□□□□ -1.93
TCF12-223	ENST00000561235	DOCK11	Q5JSL3	2073 aa		2.98	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 65 ms