RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 SAP30O75446 220 aa10.74□□□□□ -0.69
CRTC3-210ENST00000560927 C12orf74Q32Q52 190 aa10.74□□□□□ -0.69
CRTC3-210ENST00000560927 KRTAP1-3Q8IUG1 177 aa10.74□□□□□ -0.69
CRTC3-210ENST00000560927 TMEM61Q8N0U2 210 aa10.74□□□□□ -0.69
CRTC3-210ENST00000560927 PLEKHB2Q96CS7 222 aa10.74□□□□□ -0.69
CRTC3-210ENST00000560927 TIMM17AQ99595 171 aa10.74□□□□□ -0.69
CRTC3-210ENST00000560927 ZNF815PA8K554 130 aa10.73□□□□□ -0.69
CRTC3-210ENST00000560927 LINC01619G3V211 115 aa10.73□□□□□ -0.69
CRTC3-210ENST00000560927 P0DMU3 169 aa10.73□□□□□ -0.69
CRTC3-210ENST00000560927 FAM231AP0DMU4 169 aa10.73□□□□□ -0.69
CRTC3-210ENST00000560927 FAM231CP0DMU5 169 aa10.73□□□□□ -0.69
CRTC3-210ENST00000560927 KHDC1LQ5JSQ8 128 aa10.73□□□□□ -0.69
CRTC3-210ENST00000560927 TMEM141Q96I45 108 aa10.73□□□□□ -0.69
CRTC3-210ENST00000560927 AKAP9Q99996 3911 aa10.73□□□□□ -0.69
CRTC3-210ENST00000560927 TRGV11A0A075B6L2 103 aa10.73□□□□□ -0.69
CRTC3-210ENST00000560927 TRPT1Q86TN4 253 aaKnown RBP10.73□□□□□ -0.69
CRTC3-210ENST00000560927 ZNRF2Q8NHG8 242 aa10.73□□□□□ -0.69
CRTC3-210ENST00000560927 IGHV3-73A0A0B4J1V6 119 aa10.72□□□□□ -0.69
CRTC3-210ENST00000560927 IGLL5B9A064 214 aa10.72□□□□□ -0.69
CRTC3-210ENST00000560927 H3BMM0 161 aa10.72□□□□□ -0.69
CRTC3-210ENST00000560927 LINC01549A6NIU2 74 aa10.72□□□□□ -0.69
CRTC3-210ENST00000560927 PROK1P58294 105 aa10.72□□□□□ -0.69
CRTC3-210ENST00000560927 COTL1Q14019 142 aa10.72□□□□□ -0.69
CRTC3-210ENST00000560927 OR5A1Q8NGJ0 315 aa10.72□□□□□ -0.69
CRTC3-210ENST00000560927 DLX4Q92988 240 aaPredicted RBP10.72□□□□□ -0.69
CRTC3-210ENST00000560927 SCGB2A2Q13296 93 aa10.71□□□□□ -0.69
CRTC3-210ENST00000560927 LRRC75A-AS1Q8N1F1 130 aa10.71□□□□□ -0.69
CRTC3-210ENST00000560927 NSUN5P1Q3KNT7 163 aa10.7□□□□□ -0.7
CRTC3-210ENST00000560927 C4orf3Q8WVX3 66 aa10.7□□□□□ -0.7
CRTC3-210ENST00000560927 SONP18583 2426 aaKnown RBP10.7□□□□□ -0.7
CRTC3-210ENST00000560927 TSPEAR-AS2P59090 65 aa10.7□□□□□ -0.7
CRTC3-210ENST00000560927 TMEM170BQ5T4T1 132 aa10.7□□□□□ -0.7
CRTC3-210ENST00000560927 SCGB1D4Q6XE38 83 aa10.7□□□□□ -0.7
CRTC3-210ENST00000560927 ITPR3Q14573 2671 aa10.7□□□□□ -0.7
CRTC3-210ENST00000560927 A8MTW9 85 aa10.69□□□□□ -0.7
CRTC3-210ENST00000560927 RHOHQ15669 191 aa10.69□□□□□ -0.7
CRTC3-210ENST00000560927 CUBNO60494 3623 aa10.69□□□□□ -0.7
CRTC3-210ENST00000560927 PAPPA-AS1Q5QFB9 102 aa10.69□□□□□ -0.7
CRTC3-210ENST00000560927 ZNF479Q96JC4 524 aa10.69□□□□□ -0.7
CRTC3-210ENST00000560927 PEMTQ9UBM1 199 aa10.69□□□□□ -0.7
CRTC3-210ENST00000560927 I3L3M4 83 aa10.68□□□□□ -0.7
CRTC3-210ENST00000560927 C20orf203Q8NBC4 194 aa10.68□□□□□ -0.7
CRTC3-210ENST00000560927 MAP6D1Q9H9H5 199 aa10.68□□□□□ -0.7
CRTC3-210ENST00000560927 Q9UF83 564 aa10.68□□□□□ -0.7
CRTC3-210ENST00000560927 A0A1B0GWB2 263 aa10.68□□□□□ -0.7
CRTC3-210ENST00000560927 K7ERU9 68 aa10.68□□□□□ -0.7
CRTC3-210ENST00000560927 VPS25Q9BRG1 176 aa10.68□□□□□ -0.7
CRTC3-210ENST00000560927 CHD6Q8TD26 2715 aa10.68□□□□□ -0.7
CRTC3-210ENST00000560927 HERVK_113P61574 105 aa10.67□□□□□ -0.7
CRTC3-210ENST00000560927 NF1P21359 2839 aa10.67□□□□□ -0.7
CRTC3-210ENST00000560927 DEFB114Q30KQ6 69 aa10.66□□□□□ -0.7
CRTC3-210ENST00000560927 Q6ZSV7 163 aa10.66□□□□□ -0.7
CRTC3-210ENST00000560927 WFDC11Q8NEX6 87 aa10.66□□□□□ -0.7
CRTC3-210ENST00000560927 DYNLRB2Q8TF09 96 aa10.66□□□□□ -0.7
CRTC3-210ENST00000560927 SRSF9Q13242 221 aaKnown RBP eCLIP10.66□□□□□ -0.7
CRTC3-210ENST00000560927 Q6ZSN1 163 aa10.66□□□□□ -0.7
CRTC3-210ENST00000560927 C11orf44Q8N8P7 122 aa10.66□□□□□ -0.7
CRTC3-210ENST00000560927 SPAG8Q99932 426 aaPredicted RBP10.66□□□□□ -0.7
CRTC3-210ENST00000560927 TRAV2A0A0B4J234 112 aa10.65□□□□□ -0.7
CRTC3-210ENST00000560927 A0A0J9YY99 117 aa10.65□□□□□ -0.7
CRTC3-210ENST00000560927 RRN3P1Q2M238 152 aa10.65□□□□□ -0.7
CRTC3-210ENST00000560927 IGLV4-3A0A075B6K6 122 aa10.65□□□□□ -0.7
CRTC3-210ENST00000560927 NFE4Q86UQ8 179 aa10.65□□□□□ -0.7
CRTC3-210ENST00000560927 M0R2P5 195 aa10.64□□□□□ -0.71
CRTC3-210ENST00000560927 AMELXQ99217 191 aa10.64□□□□□ -0.71
CRTC3-210ENST00000560927 NACAE9PAV3 2078 aa10.64□□□□□ -0.71
CRTC3-210ENST00000560927 CCDC168Q8NDH2 2452 aa10.64□□□□□ -0.71
CRTC3-210ENST00000560927 H3BMG7 143 aa10.63□□□□□ -0.71
CRTC3-210ENST00000560927 HIST2H2BCQ6DN03 193 aa10.63□□□□□ -0.71
CRTC3-210ENST00000560927 CEMP1Q6PRD7 247 aaPredicted RBP10.63□□□□□ -0.71
CRTC3-210ENST00000560927 FAM104AQ969W3 186 aa10.63□□□□□ -0.71
CRTC3-210ENST00000560927 LINC01587Q99440 93 aa10.63□□□□□ -0.71
CRTC3-210ENST00000560927 EDA2RQ9HAV5 297 aa10.63□□□□□ -0.71
CRTC3-210ENST00000560927 IGHV3-64A0A075B6Q5 118 aa10.63□□□□□ -0.71
CRTC3-210ENST00000560927 A0A0J9YXV3 536 aa10.63□□□□□ -0.71
CRTC3-210ENST00000560927 A0A1W2PRX2 142 aa10.63□□□□□ -0.71
CRTC3-210ENST00000560927 DNAJC9-AS1A6NH13 148 aa10.63□□□□□ -0.71
CRTC3-210ENST00000560927 J3QQQ9 107 aa10.63□□□□□ -0.71
CRTC3-210ENST00000560927 CD28P10747 220 aa10.63□□□□□ -0.71
CRTC3-210ENST00000560927 ZNF415Q09FC8 603 aa10.63□□□□□ -0.71
CRTC3-210ENST00000560927 C11orf72Q8NBR9 251 aa10.63□□□□□ -0.71
CRTC3-210ENST00000560927 RAX2Q96IS3 184 aa10.63□□□□□ -0.71
CRTC3-210ENST00000560927 FLNAP21333 2647 aaKnown RBP10.63□□□□□ -0.71
CRTC3-210ENST00000560927 A8MWV9 139 aa10.62□□□□□ -0.71
CRTC3-210ENST00000560927 G3V4G9 280 aa10.62□□□□□ -0.71
CRTC3-210ENST00000560927 CFAP126Q5VTH2 177 aa10.62□□□□□ -0.71
CRTC3-210ENST00000560927 PGPEP1Q9NXJ5 209 aa10.62□□□□□ -0.71
CRTC3-210ENST00000560927 TMEM223A0PJW6 202 aa10.62□□□□□ -0.71
CRTC3-210ENST00000560927 ZNF22P17026 224 aaPredicted RBP10.62□□□□□ -0.71
CRTC3-210ENST00000560927 UBE2D1P51668 147 aa10.62□□□□□ -0.71
CRTC3-210ENST00000560927 VCX2Q9H322 139 aa10.62□□□□□ -0.71
CRTC3-210ENST00000560927 ESM1Q9NQ30 184 aa10.62□□□□□ -0.71
CRTC3-210ENST00000560927 MRPL16Q9NX20 251 aaKnown RBP10.62□□□□□ -0.71
CRTC3-210ENST00000560927 TENM4Q6N022 2769 aa10.61□□□□□ -0.71
CRTC3-210ENST00000560927 ODF3L2Q3SX64 289 aa10.61□□□□□ -0.71
CRTC3-210ENST00000560927 MTURNQ8N3F0 131 aa10.61□□□□□ -0.71
CRTC3-210ENST00000560927 TNFRSF18Q9Y5U5 241 aa10.61□□□□□ -0.71
CRTC3-210ENST00000560927 WNK1Q9H4A3 2382 aa10.61□□□□□ -0.71
CRTC3-210ENST00000560927 WFDC2Q14508 124 aa10.61□□□□□ -0.71
CRTC3-210ENST00000560927 RNASE13Q5GAN3 156 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms