RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 PNMA8CA0A1B0GUJ8 204 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 SPAARA0A1B0GVQ0 90 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 ATP6V1G2-DDX39BF2Z307 99 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 TFF1P04155 84 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 HIST1H1DP16402 221 aaKnown RBP0.7□□□□□ -2.3
USP8-211ENST00000560527 PLGLB1Q02325 96 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 IQCJQ1A5X6 159 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 CCSMST1Q4G0I0 132 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 MEIG1Q5JSS6 88 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 MIC13Q5XKP0 118 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 C3orf62Q6ZUJ4 267 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 SNX29P2Q8IUI4 249 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 OR10AC1Q8NH08 325 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 SDF2Q99470 211 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 UNC13BO14795 1591 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 CRYBG3Q68DQ2 2970 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 TENM2Q9NT68 2774 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 SIP14410 1827 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 TEX14Q8IWB6 1497 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 TRBV20-1A0A075B6N2 111 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 FAM92AA1XBS5 289 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 NUPR2A6NF83 97 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 MIF4GDA9UHW6 222 aaKnown RBP0.69□□□□□ -2.3
USP8-211ENST00000560527 F6UZH7 168 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 PITX3O75364 302 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 SNAPC5O75971 98 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 NCR2O95944 276 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 RBP4P02753 201 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 PYYP10082 97 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 ADCYAP1P18509 176 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 S100PP25815 95 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 GUCA1AP43080 201 aaPredicted RBP0.69□□□□□ -2.3
USP8-211ENST00000560527 WHAMMP3Q1A5X7 153 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 ASB16-AS1Q495Z4 193 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 LYPD5Q6UWN5 251 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 IDO2Q6ZQW0 420 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 Q6ZUT4 128 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 KCNRGQ8N5I3 272 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.69□□□□□ -2.3
USP8-211ENST00000560527 TMEM203Q969S6 136 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 DPH3Q96FX2 82 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 C12orf57Q99622 126 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 PSMG3Q9BT73 122 aaPredicted RBP0.69□□□□□ -2.3
USP8-211ENST00000560527 TMEM191AQ9H0A3 160 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 SCN3BQ9NY72 215 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 BOKQ9UMX3 212 aaPredicted RBP0.69□□□□□ -2.3
USP8-211ENST00000560527 NOP16Q9Y3C1 178 aaKnown RBP0.69□□□□□ -2.3
USP8-211ENST00000560527 KIDINS220Q9ULH0 1771 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 PTPRDP23468 1912 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 NALCNQ8IZF0 1738 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 TLN2Q9Y4G6 2542 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 AKAP13Q12802 2813 aa0.69□□□□□ -2.3
USP8-211ENST00000560527 XIRP2A4UGR9 3374 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 HIVEP3Q5T1R4 2406 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 USP9YO00507 2555 aaPredicted RBP0.68□□□□□ -2.3
USP8-211ENST00000560527 MAP3K4Q9Y6R4 1608 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 CASZ1Q86V15 1759 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 ATG2AQ2TAZ0 1938 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 TRAV17A0A0B4J275 112 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 TMEM30CPA0ZSE6 113 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 CCDC179H3BU77 68 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 CITO14578 2027 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 CHD1O14646 1710 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 IFNGP01579 166 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 IGHV3-30P01768 117 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 IGHV3-30-5P0DP03 117 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 ITPR1Q14643 2758 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 SLC25A26Q70HW3 274 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 C10orf71Q711Q0 1435 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 Q86TA4 180 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 Q8N6K4 173 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 PDCD10Q9BUL8 212 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 SEC11CQ9BY50 192 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 SAR1AQ9NR31 198 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 TAS2R8Q9NYW2 309 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 MRPL36Q9P0J6 103 aaKnown RBP0.68□□□□□ -2.3
USP8-211ENST00000560527 CEP170BQ9Y4F5 1589 aaPredicted RBP0.68□□□□□ -2.3
USP8-211ENST00000560527 KIAA1549LQ6ZVL6 1849 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 WIZO95785 1651 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 KIF21AQ7Z4S6 1674 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 EPRSP07814 1512 aaKnown RBP0.68□□□□□ -2.3
USP8-211ENST00000560527 CDK13Q14004 1512 aaKnown RBP0.68□□□□□ -2.3
USP8-211ENST00000560527 TULP4Q9NRJ4 1543 aa0.68□□□□□ -2.3
USP8-211ENST00000560527 WDR97A6NE52 1622 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 WDR7Q9Y4E6 1490 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 WDR87Q6ZQQ6 2873 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 PLXNA2O75051 1894 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 MXRA5Q9NR99 2828 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 NSD1Q96L73 2696 aaPredicted RBP0.67□□□□□ -2.3
USP8-211ENST00000560527 PRUNE2Q8WUY3 3088 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 EEA1Q15075 1411 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 FRYQ5TBA9 3013 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 J3QLW9 94 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 M0R2P5 195 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 CORTO00230 105 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 GYPBP06028 91 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 AKAIN1P0CW23 69 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 FGF7P21781 194 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 RHOHQ15669 191 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 S100A7L2Q5SY68 101 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms