RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 FAM74A4Q5TZK3 123 aa6.84□□□□□ -1.31
CDC42BPB-207ENST00000560492 PRNTQ86SH4 94 aa6.84□□□□□ -1.31
CDC42BPB-207ENST00000560492 C1orf43Q9BWL3 253 aa6.84□□□□□ -1.31
CDC42BPB-207ENST00000560492 ARL2-SNX15V9GYD0 113 aa6.84□□□□□ -1.31
CDC42BPB-207ENST00000560492 FAT3Q8TDW7 4589 aa6.84□□□□□ -1.32
CDC42BPB-207ENST00000560492 SERTM2A0A1B0GWG4 89 aa6.83□□□□□ -1.32
CDC42BPB-207ENST00000560492 TMEM262E9PQX1 116 aa6.83□□□□□ -1.32
CDC42BPB-207ENST00000560492 F8W036 122 aa6.83□□□□□ -1.32
CDC42BPB-207ENST00000560492 PDE6DO43924 150 aa6.83□□□□□ -1.32
CDC42BPB-207ENST00000560492 HLA-DQA1P01909 254 aa6.83□□□□□ -1.32
CDC42BPB-207ENST00000560492 ASIPP42127 132 aa6.83□□□□□ -1.32
CDC42BPB-207ENST00000560492 ZFP2Q6ZN57 461 aa6.83□□□□□ -1.32
CDC42BPB-207ENST00000560492 NIT1Q86X76 327 aa6.83□□□□□ -1.32
CDC42BPB-207ENST00000560492 C14orf178Q8N769 122 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPB-207ENST00000560492 NKX6-2Q9C056 277 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPB-207ENST00000560492 PSG8Q9UQ74 426 aa6.83□□□□□ -1.32
CDC42BPB-207ENST00000560492 A0A1W2PRE2 83 aa6.82□□□□□ -1.32
CDC42BPB-207ENST00000560492 TMEM218A2RU14 115 aa6.82□□□□□ -1.32
CDC42BPB-207ENST00000560492 FAM74A7A6NL05 159 aa6.82□□□□□ -1.32
CDC42BPB-207ENST00000560492 RNASE3P12724 160 aaKnown RBP6.82□□□□□ -1.32
CDC42BPB-207ENST00000560492 FLI1Q01543 452 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPB-207ENST00000560492 Q0VG73 95 aa6.82□□□□□ -1.32
CDC42BPB-207ENST00000560492 ARL6IP6Q8N6S5 226 aa6.82□□□□□ -1.32
CDC42BPB-207ENST00000560492 C5orf17Q8NAS9 161 aa6.82□□□□□ -1.32
CDC42BPB-207ENST00000560492 SUN5Q8TC36 379 aa6.82□□□□□ -1.32
CDC42BPB-207ENST00000560492 JPT2Q9H910 190 aa6.82□□□□□ -1.32
CDC42BPB-207ENST00000560492 Q9UF83 564 aa6.82□□□□□ -1.32
CDC42BPB-207ENST00000560492 H3BVH4 76 aa6.81□□□□□ -1.32
CDC42BPB-207ENST00000560492 TCRAP04437 139 aa6.81□□□□□ -1.32
CDC42BPB-207ENST00000560492 SRP19P09132 144 aaKnown RBP6.81□□□□□ -1.32
CDC42BPB-207ENST00000560492 LINC00694P0DN24 101 aa6.81□□□□□ -1.32
CDC42BPB-207ENST00000560492 HNRNPA3P51991 378 aaKnown RBP6.81□□□□□ -1.32
CDC42BPB-207ENST00000560492 ZNF674Q2M3X9 581 aa6.81□□□□□ -1.32
CDC42BPB-207ENST00000560492 PTH2Q96A98 100 aa6.81□□□□□ -1.32
CDC42BPB-207ENST00000560492 DPH3P1Q9H4G8 78 aa6.81□□□□□ -1.32
CDC42BPB-207ENST00000560492 C9JQL5 133 aa6.8□□□□□ -1.32
CDC42BPB-207ENST00000560492 TMEM250H0YL14 139 aa6.8□□□□□ -1.32
CDC42BPB-207ENST00000560492 RHODO00212 210 aa6.8□□□□□ -1.32
CDC42BPB-207ENST00000560492 NDUFS6O75380 124 aaKnown RBP6.8□□□□□ -1.32
CDC42BPB-207ENST00000560492 SUMO1P63165 101 aaKnown RBP6.8□□□□□ -1.32
CDC42BPB-207ENST00000560492 C15orf54Q8N8G6 183 aa6.8□□□□□ -1.32
CDC42BPB-207ENST00000560492 DAZAP1Q96EP5 407 aaKnown RBP6.8□□□□□ -1.32
CDC42BPB-207ENST00000560492 DPH3Q96FX2 82 aa6.8□□□□□ -1.32
CDC42BPB-207ENST00000560492 ZC2HC1AQ96GY0 325 aa6.8□□□□□ -1.32
CDC42BPB-207ENST00000560492 TCEAL7Q9BRU2 100 aa6.8□□□□□ -1.32
CDC42BPB-207ENST00000560492 SEC11CQ9BY50 192 aa6.8□□□□□ -1.32
CDC42BPB-207ENST00000560492 A0A087WWL8 130 aa6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 ZNF727A8MUV8 499 aa6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 B4DEV8 164 aa6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 USP17L23D6RBM5 183 aa6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 M0R036 132 aa6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 APOC3P02656 99 aa6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 ANGP03950 147 aaKnown RBP6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 AKR1C3P42330 323 aa6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 RPL36AP83881 106 aaKnown RBP6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 SAPCD1Q5SSQ6 148 aa6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 SVBPQ8N300 66 aa6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 RPL36ALQ969Q0 106 aaKnown RBP6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 LINC00479Q96M42 142 aa6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 SMIM7Q9BQ49 75 aa6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 CHCHD7Q9BUK0 85 aa6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 KRTAP4-11Q9BYQ6 195 aa6.79□□□□□ -1.32
CDC42BPB-207ENST00000560492 TRAV34A0A0B4J273 112 aa6.78□□□□□ -1.32
CDC42BPB-207ENST00000560492 M0R381 172 aa6.78□□□□□ -1.32
CDC42BPB-207ENST00000560492 ADCYAP1P18509 176 aa6.78□□□□□ -1.32
CDC42BPB-207ENST00000560492 FAM74A3Q4VXF1 159 aa6.78□□□□□ -1.32
CDC42BPB-207ENST00000560492 EPDR1Q9UM22 224 aa6.78□□□□□ -1.32
CDC42BPB-207ENST00000560492 CARHSP1Q9Y2V2 147 aaKnown RBP6.78□□□□□ -1.32
CDC42BPB-207ENST00000560492 PHLDA3Q9Y5J5 127 aa6.78□□□□□ -1.32
CDC42BPB-207ENST00000560492 IGKV3D-20A0A0C4DH25 116 aa6.77□□□□□ -1.33
CDC42BPB-207ENST00000560492 GRIFINA4D1Z8 144 aa6.77□□□□□ -1.33
CDC42BPB-207ENST00000560492 FABP5P3A8MUU1 101 aa6.77□□□□□ -1.33
CDC42BPB-207ENST00000560492 PEX7O00628 323 aa6.77□□□□□ -1.33
CDC42BPB-207ENST00000560492 SNAPINO95295 136 aa6.77□□□□□ -1.33
CDC42BPB-207ENST00000560492 ARMS2P0C7Q2 107 aa6.77□□□□□ -1.33
CDC42BPB-207ENST00000560492 UBE2G1P62253 170 aa6.77□□□□□ -1.33
CDC42BPB-207ENST00000560492 PIK3CD-AS1Q5SR53 167 aa6.77□□□□□ -1.33
CDC42BPB-207ENST00000560492 CLPSL2Q6UWE3 100 aa6.77□□□□□ -1.33
CDC42BPB-207ENST00000560492 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPB-207ENST00000560492 HIST1H2BAQ96A08 127 aa6.77□□□□□ -1.33
CDC42BPB-207ENST00000560492 C11orf52Q96A22 123 aa6.77□□□□□ -1.33
CDC42BPB-207ENST00000560492 CHCHD5Q9BSY4 110 aa6.77□□□□□ -1.33
CDC42BPB-207ENST00000560492 IL36BQ9NZH7 164 aa6.77□□□□□ -1.33
CDC42BPB-207ENST00000560492 TMSB15BA0A087X1C1 80 aa6.76□□□□□ -1.33
CDC42BPB-207ENST00000560492 RPL35P42766 123 aaKnown RBP6.76□□□□□ -1.33
CDC42BPB-207ENST00000560492 ATRAIDQ6UW56 229 aa6.76□□□□□ -1.33
CDC42BPB-207ENST00000560492 NAT8Q9UHE5 227 aa6.76□□□□□ -1.33
CDC42BPB-207ENST00000560492 PKHD1L1Q86WI1 4243 aa6.76□□□□□ -1.33
CDC42BPB-207ENST00000560492 TRBV7-3A0A075B6L6 115 aa6.75□□□□□ -1.33
CDC42BPB-207ENST00000560492 S100A9P06702 114 aaKnown RBP6.75□□□□□ -1.33
CDC42BPB-207ENST00000560492 PRSS1P07477 247 aa6.75□□□□□ -1.33
CDC42BPB-207ENST00000560492 GNG4P50150 75 aa6.75□□□□□ -1.33
CDC42BPB-207ENST00000560492 PNRC1Q12796 327 aaPredicted RBP6.75□□□□□ -1.33
CDC42BPB-207ENST00000560492 ADIRFQ15847 76 aa6.75□□□□□ -1.33
CDC42BPB-207ENST00000560492 ZNF56Q15929 161 aa6.75□□□□□ -1.33
CDC42BPB-207ENST00000560492 TMEM241Q24JQ0 296 aa6.75□□□□□ -1.33
CDC42BPB-207ENST00000560492 MPV17L2Q567V2 206 aa6.75□□□□□ -1.33
CDC42BPB-207ENST00000560492 C10orf91Q5T1B1 145 aa6.75□□□□□ -1.33
CDC42BPB-207ENST00000560492 UFSP1Q6NVU6 142 aa6.75□□□□□ -1.33
CDC42BPB-207ENST00000560492 ENHOQ6UWT2 76 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms