RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 ZNF418Q8TF45 676 aaPredicted RBP7.12□□□□□ -1.27
RTF1-206ENST00000560447 DUX3Q96PT4 197 aa7.12□□□□□ -1.27
RTF1-206ENST00000560447 CHAC1Q9BUX1 264 aa7.12□□□□□ -1.27
RTF1-206ENST00000560447 TP73-AS1Q9UF72 201 aa7.12□□□□□ -1.27
RTF1-206ENST00000560447 TP53TG1Q9Y2A0 90 aa7.12□□□□□ -1.27
RTF1-206ENST00000560447 ZFYVE26Q68DK2 2539 aa7.12□□□□□ -1.27
RTF1-206ENST00000560447 RBMY1BA6NDE4 496 aaKnown RBP7.11□□□□□ -1.27
RTF1-206ENST00000560447 RBMY1EA6NEQ0 496 aaKnown RBP7.11□□□□□ -1.27
RTF1-206ENST00000560447 C9orf118A6NHY6 69 aa7.11□□□□□ -1.27
RTF1-206ENST00000560447 C11orf86A6NJI1 115 aa7.11□□□□□ -1.27
RTF1-206ENST00000560447 CCL24O00175 119 aa7.11□□□□□ -1.27
RTF1-206ENST00000560447 SPRY2O43597 315 aa7.11□□□□□ -1.27
RTF1-206ENST00000560447 RBMY1DP0C7P1 496 aaKnown RBP7.11□□□□□ -1.27
RTF1-206ENST00000560447 CD300EQ496F6 205 aaPredicted RBP7.11□□□□□ -1.27
RTF1-206ENST00000560447 UFSP1Q6NVU6 142 aa7.11□□□□□ -1.27
RTF1-206ENST00000560447 MORN3Q6PF18 240 aaPredicted RBP7.11□□□□□ -1.27
RTF1-206ENST00000560447 C20orf203Q8NBC4 194 aa7.11□□□□□ -1.27
RTF1-206ENST00000560447 JPT2Q9H910 190 aa7.11□□□□□ -1.27
RTF1-206ENST00000560447 PYGO1Q9Y3Y4 419 aa7.11□□□□□ -1.27
RTF1-206ENST00000560447 SELENOKQ9Y6D0 94 aa7.11□□□□□ -1.27
RTF1-206ENST00000560447 APCP25054 2843 aa7.1□□□□□ -1.27
RTF1-206ENST00000560447 AGRNO00468 2067 aa7.1□□□□□ -1.27
RTF1-206ENST00000560447 ZFHX3Q15911 3703 aa7.1□□□□□ -1.27
RTF1-206ENST00000560447 MYMXA0A1B0GTQ4 84 aa7.1□□□□□ -1.27
RTF1-206ENST00000560447 RBMY1A1P0DJD3 496 aaKnown RBP7.1□□□□□ -1.27
RTF1-206ENST00000560447 RBMY1CP0DJD4 496 aa7.1□□□□□ -1.27
RTF1-206ENST00000560447 RBMY1FQ15415 496 aaKnown RBP7.1□□□□□ -1.27
RTF1-206ENST00000560447 FAM74A4Q5TZK3 123 aa7.1□□□□□ -1.27
RTF1-206ENST00000560447 GTF2H5Q6ZYL4 71 aa7.1□□□□□ -1.27
RTF1-206ENST00000560447 NFE4Q86UQ8 179 aa7.1□□□□□ -1.27
RTF1-206ENST00000560447 ESM1Q9NQ30 184 aa7.1□□□□□ -1.27
RTF1-206ENST00000560447 YAE1D1Q9NRH1 226 aa7.1□□□□□ -1.27
RTF1-206ENST00000560447 MXRA5Q9NR99 2828 aa7.09□□□□□ -1.27
RTF1-206ENST00000560447 K7EP13 123 aa7.09□□□□□ -1.27
RTF1-206ENST00000560447 CCL25O15444 150 aa7.09□□□□□ -1.27
RTF1-206ENST00000560447 RS1O15537 224 aa7.09□□□□□ -1.27
RTF1-206ENST00000560447 CIDEAO60543 219 aa7.09□□□□□ -1.27
RTF1-206ENST00000560447 TSHBP01222 138 aa7.09□□□□□ -1.27
RTF1-206ENST00000560447 SMIM13P0DJ93 91 aa7.09□□□□□ -1.27
RTF1-206ENST00000560447 HILS1P60008 231 aa7.09□□□□□ -1.27
RTF1-206ENST00000560447 ODF3L2Q3SX64 289 aa7.09□□□□□ -1.27
RTF1-206ENST00000560447 LCE3BQ5TA77 95 aa7.09□□□□□ -1.27
RTF1-206ENST00000560447 CEND1Q8N111 149 aa7.09□□□□□ -1.27
RTF1-206ENST00000560447 LINC01006Q8NI28 216 aa7.09□□□□□ -1.27
RTF1-206ENST00000560447 CST9LQ9H4G1 147 aa7.09□□□□□ -1.27
RTF1-206ENST00000560447 DOPEY2Q9Y3R5 2298 aa7.09□□□□□ -1.27
RTF1-206ENST00000560447 SVEP1Q4LDE5 3571 aa7.09□□□□□ -1.28
RTF1-206ENST00000560447 TEX15Q9BXT5 2789 aa7.08□□□□□ -1.28
RTF1-206ENST00000560447 ZANQ9Y493 2812 aa7.08□□□□□ -1.28
RTF1-206ENST00000560447 POLQO75417 2590 aa7.08□□□□□ -1.28
RTF1-206ENST00000560447 IGLV4-69A0A075B6H9 119 aa7.08□□□□□ -1.28
RTF1-206ENST00000560447 IGHV3-53P01767 116 aa7.08□□□□□ -1.28
RTF1-206ENST00000560447 STHQ8IWL8 128 aa7.08□□□□□ -1.28
RTF1-206ENST00000560447 C11orf72Q8NBR9 251 aa7.08□□□□□ -1.28
RTF1-206ENST00000560447 OR4C5Q8NGB2 326 aa7.08□□□□□ -1.28
RTF1-206ENST00000560447 IL17DQ8TAD2 202 aa7.08□□□□□ -1.28
RTF1-206ENST00000560447 LINC01587Q99440 93 aa7.08□□□□□ -1.28
RTF1-206ENST00000560447 TNFRSF18Q9Y5U5 241 aa7.08□□□□□ -1.28
RTF1-206ENST00000560447 TRAV8-6A0A0B4J262 113 aa7.07□□□□□ -1.28
RTF1-206ENST00000560447 CD28P10747 220 aa7.07□□□□□ -1.28
RTF1-206ENST00000560447 OR5A1Q8NGJ0 315 aa7.07□□□□□ -1.28
RTF1-206ENST00000560447 PRADC1Q9BSG0 188 aa7.07□□□□□ -1.28
RTF1-206ENST00000560447 CENPEQ02224 2701 aa7.07□□□□□ -1.28
RTF1-206ENST00000560447 ITPR3Q14573 2671 aa7.07□□□□□ -1.28
RTF1-206ENST00000560447 ABCA12Q86UK0 2595 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 NACAE9PAV3 2078 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 TRBV7-3A0A075B6L6 115 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 TMEM238LA0A1B0GVL6 79 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 A0A1B0GWB2 263 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 P0DMU3 169 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 FAM231AP0DMU4 169 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 FAM231CP0DMU5 169 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 GCSHP23434 173 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 CFAP126Q5VTH2 177 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 AMMECR1LQ6DCA0 310 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 Q6ZVH6 145 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 NEGR1Q7Z3B1 354 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 MAPKAPK5-AS1Q8N8E1 139 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 CITED2Q99967 270 aaPredicted RBP7.06□□□□□ -1.28
RTF1-206ENST00000560447 C1QTNF4Q9BXJ3 329 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 SPANXB1Q9NS25 103 aaPredicted RBP7.06□□□□□ -1.28
RTF1-206ENST00000560447 SPANXA1Q9NS26 97 aa7.06□□□□□ -1.28
RTF1-206ENST00000560447 MAP1AP78559 2803 aaPredicted RBP7.05□□□□□ -1.28
RTF1-206ENST00000560447 EPG5Q9HCE0 2579 aa7.05□□□□□ -1.28
RTF1-206ENST00000560447 TRBV10-1A0A0K0K1A3 114 aa7.05□□□□□ -1.28
RTF1-206ENST00000560447 GAGE10A6NGK3 116 aa7.05□□□□□ -1.28
RTF1-206ENST00000560447 EIF4EBP3O60516 100 aaPredicted RBP7.05□□□□□ -1.28
RTF1-206ENST00000560447 IGLV1-51P01701 117 aa7.05□□□□□ -1.28
RTF1-206ENST00000560447 RPL39P62891 51 aaKnown RBP7.05□□□□□ -1.28
RTF1-206ENST00000560447 SMAGPQ0VAQ4 97 aa7.05□□□□□ -1.28
RTF1-206ENST00000560447 AMELXQ99217 191 aa7.05□□□□□ -1.28
RTF1-206ENST00000560447 TIMM21Q9BVV7 248 aa7.05□□□□□ -1.28
RTF1-206ENST00000560447 KMT2BQ9UMN6 2715 aaPredicted RBP7.04□□□□□ -1.28
RTF1-206ENST00000560447 IGLV4-3A0A075B6K6 122 aa7.04□□□□□ -1.28
RTF1-206ENST00000560447 A0A1W2PPM0 123 aa7.04□□□□□ -1.28
RTF1-206ENST00000560447 ZNF815PA8K554 130 aa7.04□□□□□ -1.28
RTF1-206ENST00000560447 K7EP34 96 aa7.04□□□□□ -1.28
RTF1-206ENST00000560447 LEPROTO15243 131 aa7.04□□□□□ -1.28
RTF1-206ENST00000560447 FABP2P12104 132 aa7.04□□□□□ -1.28
RTF1-206ENST00000560447 FXYD2P54710 66 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms