RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 AKAP14Q86UN6 197 aa9.37□□□□□ -0.91
TPM1-223ENST00000560445 TMEM262E9PQX1 116 aa9.36□□□□□ -0.91
TPM1-223ENST00000560445 INAFM2P0DMQ5 153 aa9.36□□□□□ -0.91
TPM1-223ENST00000560445 RPL19P84098 196 aaKnown RBP9.36□□□□□ -0.91
TPM1-223ENST00000560445 CENPWQ5EE01 88 aa9.36□□□□□ -0.91
TPM1-223ENST00000560445 UBE2WQ96B02 151 aa9.36□□□□□ -0.91
TPM1-223ENST00000560445 MED9Q9NWA0 146 aa9.36□□□□□ -0.91
TPM1-223ENST00000560445 KLK12Q9UKR0 248 aa9.36□□□□□ -0.91
TPM1-223ENST00000560445 F2Z2F3 143 aa9.35□□□□□ -0.91
TPM1-223ENST00000560445 FER1L6-AS1Q8NA97 138 aa9.35□□□□□ -0.91
TPM1-223ENST00000560445 C1orf43Q9BWL3 253 aa9.35□□□□□ -0.91
TPM1-223ENST00000560445 VAX2Q9UIW0 290 aa9.35□□□□□ -0.91
TPM1-223ENST00000560445 P01737 135 aa9.34□□□□□ -0.91
TPM1-223ENST00000560445 TRGC1P0CF51 173 aa9.34□□□□□ -0.91
TPM1-223ENST00000560445 OR2D3Q8NGH3 330 aa9.34□□□□□ -0.91
TPM1-223ENST00000560445 DNAJC30Q96LL9 226 aa9.34□□□□□ -0.91
TPM1-223ENST00000560445 CHCHD5Q9BSY4 110 aa9.34□□□□□ -0.91
TPM1-223ENST00000560445 DERL1Q9BUN8 251 aa9.34□□□□□ -0.91
TPM1-223ENST00000560445 TPPP3Q9BW30 176 aa9.34□□□□□ -0.91
TPM1-223ENST00000560445 Q9UF83 564 aa9.34□□□□□ -0.91
TPM1-223ENST00000560445 TRBV25-1A0A075B6N4 114 aa9.33□□□□□ -0.92
TPM1-223ENST00000560445 BCL2P10415 239 aa9.33□□□□□ -0.92
TPM1-223ENST00000560445 SSTP61278 116 aa9.33□□□□□ -0.92
TPM1-223ENST00000560445 ATRAIDQ6UW56 229 aa9.33□□□□□ -0.92
TPM1-223ENST00000560445 Q8N3U1 123 aa9.33□□□□□ -0.92
TPM1-223ENST00000560445 NEXN-AS1Q8NBZ9 246 aa9.33□□□□□ -0.92
TPM1-223ENST00000560445 PLA2G1BP04054 148 aaKnown RBP9.32□□□□□ -0.92
TPM1-223ENST00000560445 BLOC1S1P78537 153 aa9.32□□□□□ -0.92
TPM1-223ENST00000560445 MIAQ16674 131 aa9.32□□□□□ -0.92
TPM1-223ENST00000560445 BAALCQ8WXS3 180 aa9.32□□□□□ -0.92
TPM1-223ENST00000560445 hCG_2014768A0A024R1R8 64 aa9.31□□□□□ -0.92
TPM1-223ENST00000560445 MUC21A0A0G2JKD1 596 aa9.31□□□□□ -0.92
TPM1-223ENST00000560445 MUC21A0A140T8X8 626 aa9.31□□□□□ -0.92
TPM1-223ENST00000560445 RAB19A4D1S5 217 aa9.31□□□□□ -0.92
TPM1-223ENST00000560445 LECT2O14960 151 aa9.31□□□□□ -0.92
TPM1-223ENST00000560445 ANGP03950 147 aaKnown RBP9.31□□□□□ -0.92
TPM1-223ENST00000560445 MGPP08493 103 aa9.31□□□□□ -0.92
TPM1-223ENST00000560445 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.3□□□□□ -0.92
TPM1-223ENST00000560445 IGHV1-24A0A0C4DH33 117 aa9.3□□□□□ -0.92
TPM1-223ENST00000560445 IGLC6P0CF74 106 aa9.3□□□□□ -0.92
TPM1-223ENST00000560445 WDR73Q6P4I2 378 aa9.3□□□□□ -0.92
TPM1-223ENST00000560445 C9orf62Q8N4C0 152 aa9.3□□□□□ -0.92
TPM1-223ENST00000560445 C15orf54Q8N8G6 183 aa9.3□□□□□ -0.92
TPM1-223ENST00000560445 DMBT1Q9UGM3 2413 aaPredicted RBP9.29□□□□□ -0.92
TPM1-223ENST00000560445 C19orf71A6NCJ1 209 aa9.29□□□□□ -0.92
TPM1-223ENST00000560445 IGLV2-8P01709 118 aa9.29□□□□□ -0.92
TPM1-223ENST00000560445 Q6ZSA8 131 aa9.29□□□□□ -0.92
TPM1-223ENST00000560445 SMR3BP02814 79 aaPredicted RBP9.28□□□□□ -0.92
TPM1-223ENST00000560445 GZMBP10144 247 aa9.28□□□□□ -0.92
TPM1-223ENST00000560445 WFDC2Q14508 124 aa9.28□□□□□ -0.92
TPM1-223ENST00000560445 IQCJQ1A5X6 159 aa9.28□□□□□ -0.92
TPM1-223ENST00000560445 MPV17L2Q567V2 206 aa9.28□□□□□ -0.92
TPM1-223ENST00000560445 ALKAL2Q6UX46 152 aa9.28□□□□□ -0.92
TPM1-223ENST00000560445 SMIM15Q7Z3B0 74 aa9.28□□□□□ -0.92
TPM1-223ENST00000560445 DPH3P1Q9H4G8 78 aa9.28□□□□□ -0.92
TPM1-223ENST00000560445 KIF25-AS1Q9Y6Z4 181 aa9.28□□□□□ -0.92
TPM1-223ENST00000560445 RASL11AQ6T310 242 aa9.27□□□□□ -0.93
TPM1-223ENST00000560445 M0QY20 66 aa9.26□□□□□ -0.93
TPM1-223ENST00000560445 SUMO4Q6EEV6 95 aa9.26□□□□□ -0.93
TPM1-223ENST00000560445 PGLYRP4Q96LB8 373 aa9.26□□□□□ -0.93
TPM1-223ENST00000560445 TMEM243Q9BU79 118 aa9.26□□□□□ -0.93
TPM1-223ENST00000560445 TRBV20OR9-2A0A075B6H5 130 aa9.25□□□□□ -0.93
TPM1-223ENST00000560445 TRAV8-4A0A0B4J246 113 aa9.25□□□□□ -0.93
TPM1-223ENST00000560445 TMEM250H0YL14 139 aa9.25□□□□□ -0.93
TPM1-223ENST00000560445 UBE2L6O14933 153 aa9.25□□□□□ -0.93
TPM1-223ENST00000560445 HLA-DQA1P01909 254 aa9.25□□□□□ -0.93
TPM1-223ENST00000560445 CTRLP40313 264 aa9.25□□□□□ -0.93
TPM1-223ENST00000560445 RBX1P62877 108 aa9.25□□□□□ -0.93
TPM1-223ENST00000560445 TEX261Q6UWH6 196 aa9.25□□□□□ -0.93
TPM1-223ENST00000560445 LYZL1Q6UWQ5 148 aa9.25□□□□□ -0.93
TPM1-223ENST00000560445 ENHOQ6UWT2 76 aa9.25□□□□□ -0.93
TPM1-223ENST00000560445 NUDT10Q8NFP7 164 aa9.25□□□□□ -0.93
TPM1-223ENST00000560445 NUDT11Q96G61 164 aa9.25□□□□□ -0.93
TPM1-223ENST00000560445 RPP21Q9H633 154 aaKnown RBP9.25□□□□□ -0.93
TPM1-223ENST00000560445 NIT2Q9NQR4 276 aa9.25□□□□□ -0.93
TPM1-223ENST00000560445 PRR34Q9NV39 138 aa9.25□□□□□ -0.93
TPM1-223ENST00000560445 NTF3P20783 257 aa9.24□□□□□ -0.93
TPM1-223ENST00000560445 COTL1Q14019 142 aa9.24□□□□□ -0.93
TPM1-223ENST00000560445 TWIST1Q15672 202 aa9.24□□□□□ -0.93
TPM1-223ENST00000560445 DGAT2L7PQ6IED9 249 aa9.24□□□□□ -0.93
TPM1-223ENST00000560445 CLRN3Q8NCR9 226 aa9.24□□□□□ -0.93
TPM1-223ENST00000560445 OCC1Q8TAD7 63 aa9.24□□□□□ -0.93
TPM1-223ENST00000560445 CNFNQ9BYD5 112 aa9.24□□□□□ -0.93
TPM1-223ENST00000560445 EIF5A2Q9GZV4 153 aaKnown RBP9.24□□□□□ -0.93
TPM1-223ENST00000560445 NKX2-5P52952 324 aaPredicted RBP9.23□□□□□ -0.93
TPM1-223ENST00000560445 HAMPP81172 84 aa9.23□□□□□ -0.93
TPM1-223ENST00000560445 GAGE6Q13070 117 aa9.23□□□□□ -0.93
TPM1-223ENST00000560445 NTM-AS1Q6ZSK4 140 aa9.23□□□□□ -0.93
TPM1-223ENST00000560445 LINC00528Q8N1L1 170 aa9.23□□□□□ -0.93
TPM1-223ENST00000560445 LINC00269Q8N2A0 174 aa9.23□□□□□ -0.93
TPM1-223ENST00000560445 BORCS7Q96B45 105 aa9.23□□□□□ -0.93
TPM1-223ENST00000560445 CHAC1Q9BUX1 264 aa9.23□□□□□ -0.93
TPM1-223ENST00000560445 FAM30AQ9NZY2 134 aa9.23□□□□□ -0.93
TPM1-223ENST00000560445 A0A1B0GUV1 79 aa9.22□□□□□ -0.93
TPM1-223ENST00000560445 USP17L23D6RBM5 183 aa9.22□□□□□ -0.93
TPM1-223ENST00000560445 CEBPGP53567 150 aa9.22□□□□□ -0.93
TPM1-223ENST00000560445 LYPD6BQ8NI32 183 aa9.22□□□□□ -0.93
TPM1-223ENST00000560445 RNASE7Q9H1E1 156 aaKnown RBP9.22□□□□□ -0.93
TPM1-223ENST00000560445 SRRM2Q9UQ35 2752 aaKnown RBP9.22□□□□□ -0.93
TPM1-223ENST00000560445 A8MWL6 223 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 203.7 ms