RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 TRAV26-2A0A0B4J265 109 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 TRAV25A0A0B4J276 109 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 TRBV27A0A0K0K1C4 114 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 A0A1B0GUV1 79 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 COX7CP15954 63 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 ZNF22P17026 224 aaPredicted RBP3.84□□□□□ -1.79
TPM1-222ENST00000560131 TSPEAR-AS2P59090 65 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 LINC00315P59091 139 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 NANOS2P60321 138 aaKnown RBP3.84□□□□□ -1.79
TPM1-222ENST00000560131 NSUN5P1Q3KNT7 163 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 C9orf153Q5TBE3 101 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 FAM222AQ5U5X8 452 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 DAND5Q8N907 189 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 PRSS33Q8NF86 280 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 FAM19A4Q96LR4 140 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 LITAFQ99732 161 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 Q9HAA7 133 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 EDA2RQ9HAV5 297 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 CHD7Q9P2D1 2997 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 ICOSQ9Y6W8 199 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 KIF25-AS1Q9Y6Z4 181 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 MED13Q9UHV7 2174 aa3.84□□□□□ -1.79
TPM1-222ENST00000560131 ATOX1O00244 68 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 CDX4O14627 284 aaPredicted RBP3.83□□□□□ -1.8
TPM1-222ENST00000560131 OVOL1O14753 267 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 RNASE4P34096 147 aaKnown RBP3.83□□□□□ -1.8
TPM1-222ENST00000560131 DLX1P56177 255 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 TMEM258P61165 79 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 ZNF56Q15929 161 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 LYPD2Q6UXB3 125 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 MUSTN1Q8IVN3 82 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 Q8N6K4 173 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 LY6G5BQ8NDX9 201 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 DCANP1Q8TF63 244 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 ITLN2Q8WWU7 325 aaPredicted RBP3.83□□□□□ -1.8
TPM1-222ENST00000560131 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 OVOL2Q9BRP0 275 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 DYNLRB1Q9NP97 96 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 DPM3Q9P2X0 92 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 TP53TG1Q9Y2A0 90 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 PYGO1Q9Y3Y4 419 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 FAM186AA6NE01 2351 aa3.83□□□□□ -1.8
TPM1-222ENST00000560131 BRCA2P51587 3418 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 SVILO95425 2214 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 FAM236AA0A1B0GUQ0 79 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 FAM236BA0A1B0GV22 79 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 A0A1W2PNU3 283 aaPredicted RBP3.82□□□□□ -1.8
TPM1-222ENST00000560131 CLPSL1A2RUU4 121 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 ODF3BA8MYP8 253 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 M0R1W7 72 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 TRACP01848 142 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 APELAP0DMC3 54 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 LINC00694P0DN24 101 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 SAA4P35542 130 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 LINC01547P58512 204 aaPredicted RBP3.82□□□□□ -1.8
TPM1-222ENST00000560131 HERVK_113P63121 156 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 CCL8P80075 99 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 SFTA2Q6UW10 78 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 ZFAND2AQ8N6M9 145 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 TMEM105Q8N8V8 129 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 COPS9Q8WXC6 57 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 RPL39LQ96EH5 51 aaKnown RBP3.82□□□□□ -1.8
TPM1-222ENST00000560131 CHCHD5Q9BSY4 110 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 ZNF256Q9Y2P7 627 aaPredicted RBP3.82□□□□□ -1.8
TPM1-222ENST00000560131 PHLDA3Q9Y5J5 127 aa3.82□□□□□ -1.8
TPM1-222ENST00000560131 ARFGEF3Q5TH69 2177 aa3.81□□□□□ -1.8
TPM1-222ENST00000560131 NDUFC2-KCTD14E9PQ53 114 aa3.81□□□□□ -1.8
TPM1-222ENST00000560131 INAFM2P0DMQ5 153 aa3.81□□□□□ -1.8
TPM1-222ENST00000560131 KRTAP10-6P60371 365 aaPredicted RBP3.81□□□□□ -1.8
TPM1-222ENST00000560131 MRPS36P82909 103 aaKnown RBP3.81□□□□□ -1.8
TPM1-222ENST00000560131 MIAQ16674 131 aa3.81□□□□□ -1.8
TPM1-222ENST00000560131 Q1RN00 199 aa3.81□□□□□ -1.8
TPM1-222ENST00000560131 MINOS1Q5TGZ0 78 aa3.81□□□□□ -1.8
TPM1-222ENST00000560131 FAM19A5Q7Z5A7 132 aaPredicted RBP3.81□□□□□ -1.8
TPM1-222ENST00000560131 SMIM29Q86T20 159 aa3.81□□□□□ -1.8
TPM1-222ENST00000560131 TMEM61Q8N0U2 210 aa3.81□□□□□ -1.8
TPM1-222ENST00000560131 C14orf178Q8N769 122 aaPredicted RBP3.81□□□□□ -1.8
TPM1-222ENST00000560131 MRAPQ8TCY5 172 aa3.81□□□□□ -1.8
TPM1-222ENST00000560131 RNASE6Q93091 150 aaKnown RBP3.81□□□□□ -1.8
TPM1-222ENST00000560131 FAM215AQ9Y5M1 114 aa3.81□□□□□ -1.8
TPM1-222ENST00000560131 MINOS1-NBL1R4GNA1 71 aa3.81□□□□□ -1.8
TPM1-222ENST00000560131 TRBV7-1A0A0A6YYK4 115 aa3.8□□□□□ -1.8
TPM1-222ENST00000560131 IGHV1-58A0A0C4DH39 117 aa3.8□□□□□ -1.8
TPM1-222ENST00000560131 K7EQD1 137 aa3.8□□□□□ -1.8
TPM1-222ENST00000560131 RNASE3P12724 160 aaKnown RBP3.8□□□□□ -1.8
TPM1-222ENST00000560131 UBE2E1P51965 193 aa3.8□□□□□ -1.8
TPM1-222ENST00000560131 ECSCRQ19T08 205 aa3.8□□□□□ -1.8
TPM1-222ENST00000560131 IGFL3Q6UXB1 125 aa3.8□□□□□ -1.8
TPM1-222ENST00000560131 TIMM21Q9BVV7 248 aa3.8□□□□□ -1.8
TPM1-222ENST00000560131 KLLNB2CW77 178 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 I3L3M4 83 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 SOCS3O14543 225 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 COX7A2LO14548 114 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 IGF1P05019 195 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 S100A4P26447 101 aaKnown RBP3.79□□□□□ -1.8
TPM1-222ENST00000560131 EMP1P54849 157 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 ATP5J2P56134 94 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 NDPQ00604 133 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 PRR9Q5T870 116 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 RNF182Q8N6D2 247 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms