RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 PRO0628Q9UI54 55 aa14.42□□□□□ -0.1
SEMA4B-215ENST00000560089 ASH1LQ9NR48 2969 aaKnown RBP14.42□□□□□ -0.1
SEMA4B-215ENST00000560089 TRBV7-1A0A0A6YYK4 115 aa14.42□□□□□ -0.1
SEMA4B-215ENST00000560089 IGIPA6NJ69 53 aa14.42□□□□□ -0.1
SEMA4B-215ENST00000560089 PRSS2P07478 247 aa14.42□□□□□ -0.1
SEMA4B-215ENST00000560089 MGPP08493 103 aa14.42□□□□□ -0.1
SEMA4B-215ENST00000560089 GATA4P43694 442 aa14.42□□□□□ -0.1
SEMA4B-215ENST00000560089 DEFB104AQ8WTQ1 72 aa14.42□□□□□ -0.1
SEMA4B-215ENST00000560089 DCANP1Q8TF63 244 aa14.41□□□□□ -0.1
SEMA4B-215ENST00000560089 PEMTQ9UBM1 199 aa14.41□□□□□ -0.1
SEMA4B-215ENST00000560089 I3L3M4 83 aa14.4□□□□□ -0.1
SEMA4B-215ENST00000560089 M0R381 172 aa14.4□□□□□ -0.1
SEMA4B-215ENST00000560089 AGPAT4-IT1Q9H0P7 198 aa14.4□□□□□ -0.1
SEMA4B-215ENST00000560089 SMAD5-AS1Q9Y6J3 95 aa14.4□□□□□ -0.1
SEMA4B-215ENST00000560089 Q6ZSV7 163 aa14.4□□□□□ -0.1
SEMA4B-215ENST00000560089 GNLYP22749 145 aa14.39□□□□□ -0.11
SEMA4B-215ENST00000560089 TMEM200BQ69YZ2 307 aa14.39□□□□□ -0.11
SEMA4B-215ENST00000560089 C8orf31Q8N9H6 132 aa14.39□□□□□ -0.11
SEMA4B-215ENST00000560089 RPL39P62891 51 aaKnown RBP14.39□□□□□ -0.11
SEMA4B-215ENST00000560089 ZNF876PQ49A33 203 aa14.39□□□□□ -0.11
SEMA4B-215ENST00000560089 TMEM141Q96I45 108 aa14.39□□□□□ -0.11
SEMA4B-215ENST00000560089 TACC2O95359 2948 aa14.39□□□□□ -0.11
SEMA4B-215ENST00000560089 SDIM1Q6ZPB5 146 aa14.38□□□□□ -0.11
SEMA4B-215ENST00000560089 DPH3P1Q9H4G8 78 aa14.38□□□□□ -0.11
SEMA4B-215ENST00000560089 A0A0J9YXY3 114 aa14.38□□□□□ -0.11
SEMA4B-215ENST00000560089 PRB1P04280 392 aa14.38□□□□□ -0.11
SEMA4B-215ENST00000560089 RPL18AQ02543 176 aaKnown RBP14.38□□□□□ -0.11
SEMA4B-215ENST00000560089 LINC00311Q8N616 119 aa14.38□□□□□ -0.11
SEMA4B-215ENST00000560089 TIMM21Q9BVV7 248 aa14.38□□□□□ -0.11
SEMA4B-215ENST00000560089 CCL8P80075 99 aa14.37□□□□□ -0.11
SEMA4B-215ENST00000560089 RNF182Q8N6D2 247 aa14.37□□□□□ -0.11
SEMA4B-215ENST00000560089 C10orf105Q8TEF2 133 aa14.37□□□□□ -0.11
SEMA4B-215ENST00000560089 TINCRA0A1B0GVN0 87 aa14.37□□□□□ -0.11
SEMA4B-215ENST00000560089 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.37□□□□□ -0.11
SEMA4B-215ENST00000560089 SDHAF1A6NFY7 115 aa14.37□□□□□ -0.11
SEMA4B-215ENST00000560089 SERP2Q8N6R1 65 aa14.37□□□□□ -0.11
SEMA4B-215ENST00000560089 UPK3BQ9BT76 320 aa14.37□□□□□ -0.11
SEMA4B-215ENST00000560089 MYO18BQ8IUG5 2567 aa14.36□□□□□ -0.11
SEMA4B-215ENST00000560089 CRYBG3Q68DQ2 2970 aa14.35□□□□□ -0.11
SEMA4B-215ENST00000560089 AKAP6Q13023 2319 aa14.35□□□□□ -0.11
SEMA4B-215ENST00000560089 IGLV3-9A0A075B6K5 115 aa14.35□□□□□ -0.11
SEMA4B-215ENST00000560089 IGHV1-46P01743 117 aa14.35□□□□□ -0.11
SEMA4B-215ENST00000560089 TIMM17AQ99595 171 aa14.35□□□□□ -0.11
SEMA4B-215ENST00000560089 PFN2P35080 140 aa14.34□□□□□ -0.11
SEMA4B-215ENST00000560089 A0A0J9YX75 114 aa14.34□□□□□ -0.11
SEMA4B-215ENST00000560089 RNASE6Q93091 150 aaKnown RBP14.34□□□□□ -0.11
SEMA4B-215ENST00000560089 ADARB2-AS1A8MUL3 147 aa14.33□□□□□ -0.11
SEMA4B-215ENST00000560089 E7EQL1 145 aa14.33□□□□□ -0.11
SEMA4B-215ENST00000560089 RPL35AP18077 110 aaKnown RBP14.33□□□□□ -0.11
SEMA4B-215ENST00000560089 LINC00336Q6ZUF6 198 aa14.33□□□□□ -0.11
SEMA4B-215ENST00000560089 PKIGQ9Y2B9 76 aa14.33□□□□□ -0.11
SEMA4B-215ENST00000560089 ZNF462Q96JM2 2506 aa14.33□□□□□ -0.12
SEMA4B-215ENST00000560089 TRAV12-3A0A0B4J271 114 aa14.33□□□□□ -0.12
SEMA4B-215ENST00000560089 NPC2P61916 151 aa14.33□□□□□ -0.12
SEMA4B-215ENST00000560089 DYNLRB1Q9NP97 96 aa14.33□□□□□ -0.12
SEMA4B-215ENST00000560089 PPP1R17O96001 155 aa14.33□□□□□ -0.12
SEMA4B-215ENST00000560089 NUP37Q8NFH4 326 aa14.32□□□□□ -0.12
SEMA4B-215ENST00000560089 EDN2P20800 178 aa14.32□□□□□ -0.12
SEMA4B-215ENST00000560089 ZNF580Q9UK33 172 aa14.32□□□□□ -0.12
SEMA4B-215ENST00000560089 IGHV3OR16-8A0A075B7F1 116 aa14.31□□□□□ -0.12
SEMA4B-215ENST00000560089 RS1O15537 224 aa14.31□□□□□ -0.12
SEMA4B-215ENST00000560089 DAZ2Q13117 558 aaKnown RBP14.31□□□□□ -0.12
SEMA4B-215ENST00000560089 DAZ4Q86SG3 579 aaKnown RBP14.31□□□□□ -0.12
SEMA4B-215ENST00000560089 GPHB5Q86YW7 130 aa14.31□□□□□ -0.12
SEMA4B-215ENST00000560089 DAZ1Q9NQZ3 744 aaKnown RBP14.31□□□□□ -0.12
SEMA4B-215ENST00000560089 DAZ3Q9NR90 486 aaKnown RBP14.31□□□□□ -0.12
SEMA4B-215ENST00000560089 LITAFQ99732 161 aa14.31□□□□□ -0.12
SEMA4B-215ENST00000560089 USP9XQ93008 2570 aaPredicted RBP14.31□□□□□ -0.12
SEMA4B-215ENST00000560089 BBC3Q96PG8 261 aaPredicted RBP14.3□□□□□ -0.12
SEMA4B-215ENST00000560089 S100A4P26447 101 aaKnown RBP14.3□□□□□ -0.12
SEMA4B-215ENST00000560089 MALRD1Q5VYJ5 2156 aa14.29□□□□□ -0.12
SEMA4B-215ENST00000560089 SYNJ2BPP57105 145 aa14.29□□□□□ -0.12
SEMA4B-215ENST00000560089 PHLDA3Q9Y5J5 127 aa14.29□□□□□ -0.12
SEMA4B-215ENST00000560089 MAP1AP78559 2803 aaPredicted RBP14.29□□□□□ -0.12
SEMA4B-215ENST00000560089 IGHV3-23P01764 117 aa14.29□□□□□ -0.12
SEMA4B-215ENST00000560089 ADAMTSL4-AS1Q5T5F5 129 aa14.28□□□□□ -0.12
SEMA4B-215ENST00000560089 TMEM61Q8N0U2 210 aa14.28□□□□□ -0.12
SEMA4B-215ENST00000560089 TIRAPP58753 221 aa14.28□□□□□ -0.12
SEMA4B-215ENST00000560089 SEC61GP60059 68 aa14.28□□□□□ -0.12
SEMA4B-215ENST00000560089 FBXL19-AS1Q494R0 122 aa14.28□□□□□ -0.12
SEMA4B-215ENST00000560089 ARHGAP32A7KAX9 2087 aa14.27□□□□□ -0.12
SEMA4B-215ENST00000560089 DAND5Q8N907 189 aa14.27□□□□□ -0.12
SEMA4B-215ENST00000560089 CCL17Q92583 94 aa14.27□□□□□ -0.12
SEMA4B-215ENST00000560089 OPRPNQ99935 248 aaPredicted RBP14.27□□□□□ -0.12
SEMA4B-215ENST00000560089 SVEP1Q4LDE5 3571 aa14.27□□□□□ -0.13
SEMA4B-215ENST00000560089 LYNX1G3V0Z9 82 aa14.26□□□□□ -0.13
SEMA4B-215ENST00000560089 LYNX1P0DP58 116 aa14.26□□□□□ -0.13
SEMA4B-215ENST00000560089 IGHV1-3A0A0C4DH29 117 aa14.26□□□□□ -0.13
SEMA4B-215ENST00000560089 C19orf84I3L1E1 186 aa14.26□□□□□ -0.13
SEMA4B-215ENST00000560089 M0R1W7 72 aa14.26□□□□□ -0.13
SEMA4B-215ENST00000560089 F8W735 103 aaPredicted RBP14.25□□□□□ -0.13
SEMA4B-215ENST00000560089 LY6HO94772 140 aa14.25□□□□□ -0.13
SEMA4B-215ENST00000560089 PRB3Q04118 309 aaPredicted RBP14.25□□□□□ -0.13
SEMA4B-215ENST00000560089 MIAQ16674 131 aa14.25□□□□□ -0.13
SEMA4B-215ENST00000560089 VPS13CQ709C8 3753 aa14.25□□□□□ -0.13
SEMA4B-215ENST00000560089 IGHV3-35A0A0C4DH35 117 aa14.25□□□□□ -0.13
SEMA4B-215ENST00000560089 ITLN2Q8WWU7 325 aaPredicted RBP14.25□□□□□ -0.13
SEMA4B-215ENST00000560089 NACAE9PAV3 2078 aa14.25□□□□□ -0.13
SEMA4B-215ENST00000560089 IGHV3-30-3P0DP02 117 aa14.24□□□□□ -0.13
SEMA4B-215ENST00000560089 IGKV3D-7A0A0C4DH55 119 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms