RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 EVI2AP22794 236 aa14.48□□□□□ -0.09
PSEN1-225ENST00000560005 CKS2P33552 79 aa14.48□□□□□ -0.09
PSEN1-225ENST00000560005 MRPL51Q4U2R6 128 aaKnown RBP14.48□□□□□ -0.09
PSEN1-225ENST00000560005 C1orf134Q5TEV5 83 aa14.48□□□□□ -0.09
PSEN1-225ENST00000560005 ZNF705AQ6ZN79 300 aaPredicted RBP14.48□□□□□ -0.09
PSEN1-225ENST00000560005 MRAP2Q96G30 205 aa14.48□□□□□ -0.09
PSEN1-225ENST00000560005 IGHV3OR16-12A0A075B7B8 117 aa14.47□□□□□ -0.09
PSEN1-225ENST00000560005 PPP1R17O96001 155 aa14.47□□□□□ -0.09
PSEN1-225ENST00000560005 RRN3P1Q2M238 152 aa14.47□□□□□ -0.09
PSEN1-225ENST00000560005 ZNF876PQ49A33 203 aa14.47□□□□□ -0.09
PSEN1-225ENST00000560005 C16orf74Q96GX8 76 aa14.47□□□□□ -0.09
PSEN1-225ENST00000560005 C11orf72Q8NBR9 251 aa14.46□□□□□ -0.09
PSEN1-225ENST00000560005 RNF185Q96GF1 192 aa14.46□□□□□ -0.09
PSEN1-225ENST00000560005 A8MWV9 139 aa14.45□□□□□ -0.1
PSEN1-225ENST00000560005 C18orf32Q8TCD1 76 aa14.45□□□□□ -0.1
PSEN1-225ENST00000560005 PRELID3AQ96N28 172 aa14.45□□□□□ -0.1
PSEN1-225ENST00000560005 GSN-AS1Q9NRJ2 163 aa14.45□□□□□ -0.1
PSEN1-225ENST00000560005 D6R8Y8 96 aa14.44□□□□□ -0.1
PSEN1-225ENST00000560005 S100A2P29034 98 aa14.44□□□□□ -0.1
PSEN1-225ENST00000560005 C14orf178Q8N769 122 aaPredicted RBP14.44□□□□□ -0.1
PSEN1-225ENST00000560005 TNP2Q05952 138 aa14.43□□□□□ -0.1
PSEN1-225ENST00000560005 DAZ2Q13117 558 aaKnown RBP14.43□□□□□ -0.1
PSEN1-225ENST00000560005 Q8N1X5 172 aa14.43□□□□□ -0.1
PSEN1-225ENST00000560005 RNASE8Q8TDE3 154 aaKnown RBP14.43□□□□□ -0.1
PSEN1-225ENST00000560005 NACAE9PAV3 2078 aa14.42□□□□□ -0.1
PSEN1-225ENST00000560005 LOC105371267A0A1B0GV96 52 aa14.42□□□□□ -0.1
PSEN1-225ENST00000560005 ESDP10768 282 aa14.42□□□□□ -0.1
PSEN1-225ENST00000560005 RASL10AQ92737 203 aa14.42□□□□□ -0.1
PSEN1-225ENST00000560005 RHODO00212 210 aa14.41□□□□□ -0.1
PSEN1-225ENST00000560005 AZU1P20160 251 aa14.41□□□□□ -0.1
PSEN1-225ENST00000560005 KIF25-AS1Q9Y6Z4 181 aa14.41□□□□□ -0.1
PSEN1-225ENST00000560005 CIDEAO60543 219 aa14.4□□□□□ -0.1
PSEN1-225ENST00000560005 SPART-AS1P0CW21 52 aa14.4□□□□□ -0.1
PSEN1-225ENST00000560005 EMP1P54849 157 aa14.4□□□□□ -0.1
PSEN1-225ENST00000560005 HIST3H2BBQ8N257 126 aa14.4□□□□□ -0.1
PSEN1-225ENST00000560005 CHCHD1Q96BP2 118 aaKnown RBP14.4□□□□□ -0.1
PSEN1-225ENST00000560005 MGPP08493 103 aa14.39□□□□□ -0.11
PSEN1-225ENST00000560005 TMEM18Q96B42 140 aa14.39□□□□□ -0.11
PSEN1-225ENST00000560005 MAP1LC3AQ9H492 121 aa14.39□□□□□ -0.11
PSEN1-225ENST00000560005 PRSS47A8MTI9 375 aa14.38□□□□□ -0.11
PSEN1-225ENST00000560005 F5H697 171 aa14.38□□□□□ -0.11
PSEN1-225ENST00000560005 H7C1H1 209 aa14.38□□□□□ -0.11
PSEN1-225ENST00000560005 SERF1AO75920 110 aa14.38□□□□□ -0.11
PSEN1-225ENST00000560005 CRYGDP07320 174 aa14.38□□□□□ -0.11
PSEN1-225ENST00000560005 PMCHP20382 165 aa14.38□□□□□ -0.11
PSEN1-225ENST00000560005 PRSS3P2Q8NHM4 247 aa14.38□□□□□ -0.11
PSEN1-225ENST00000560005 PACRGQ96M98 296 aaPredicted RBP14.38□□□□□ -0.11
PSEN1-225ENST00000560005 DMBT1Q9UGM3 2413 aaPredicted RBP14.37□□□□□ -0.11
PSEN1-225ENST00000560005 TNFRSF6BO95407 300 aa14.37□□□□□ -0.11
PSEN1-225ENST00000560005 LINC00614P0C842 121 aa14.37□□□□□ -0.11
PSEN1-225ENST00000560005 LINC00315P59091 139 aa14.37□□□□□ -0.11
PSEN1-225ENST00000560005 NIT1Q86X76 327 aa14.37□□□□□ -0.11
PSEN1-225ENST00000560005 C20orf78Q9BR46 151 aa14.37□□□□□ -0.11
PSEN1-225ENST00000560005 NXT2Q9NPJ8 142 aaKnown RBP14.37□□□□□ -0.11
PSEN1-225ENST00000560005 A0A087WWL8 130 aa14.36□□□□□ -0.11
PSEN1-225ENST00000560005 RS1O15537 224 aa14.36□□□□□ -0.11
PSEN1-225ENST00000560005 PRM2P04554 102 aa14.36□□□□□ -0.11
PSEN1-225ENST00000560005 HTN3P15516 51 aa14.36□□□□□ -0.11
PSEN1-225ENST00000560005 IQCJQ1A5X6 159 aa14.36□□□□□ -0.11
PSEN1-225ENST00000560005 ZFP2Q6ZN57 461 aa14.36□□□□□ -0.11
PSEN1-225ENST00000560005 FA2HQ7L5A8 372 aa14.36□□□□□ -0.11
PSEN1-225ENST00000560005 TRGV1A0A0A0MS02 117 aa14.35□□□□□ -0.11
PSEN1-225ENST00000560005 HSBP1O75506 76 aa14.35□□□□□ -0.11
PSEN1-225ENST00000560005 NPYP01303 97 aa14.35□□□□□ -0.11
PSEN1-225ENST00000560005 ZNF56Q15929 161 aa14.35□□□□□ -0.11
PSEN1-225ENST00000560005 FAM74A4Q5TZK3 123 aa14.35□□□□□ -0.11
PSEN1-225ENST00000560005 JPT2Q9H910 190 aa14.35□□□□□ -0.11
PSEN1-225ENST00000560005 SMKR1H3BMG3 65 aa14.34□□□□□ -0.11
PSEN1-225ENST00000560005 NCR2O95944 276 aa14.34□□□□□ -0.11
PSEN1-225ENST00000560005 RNASEKQ6P5S7 137 aaKnown RBP14.34□□□□□ -0.11
PSEN1-225ENST00000560005 SAMD10Q9BYL1 202 aa14.34□□□□□ -0.11
PSEN1-225ENST00000560005 NOP10Q9NPE3 64 aaKnown RBP14.34□□□□□ -0.11
PSEN1-225ENST00000560005 MRPL16Q9NX20 251 aaKnown RBP14.34□□□□□ -0.11
PSEN1-225ENST00000560005 DKK2Q9UBU2 259 aa14.34□□□□□ -0.11
PSEN1-225ENST00000560005 FAM222AQ5U5X8 452 aa14.33□□□□□ -0.12
PSEN1-225ENST00000560005 CFAP126Q5VTH2 177 aa14.33□□□□□ -0.12
PSEN1-225ENST00000560005 NRACQ8N912 160 aa14.33□□□□□ -0.12
PSEN1-225ENST00000560005 OR4C5Q8NGB2 326 aa14.33□□□□□ -0.12
PSEN1-225ENST00000560005 AP5S1Q9NUS5 200 aa14.33□□□□□ -0.12
PSEN1-225ENST00000560005 TRAV4A0A0B4J268 109 aa14.32□□□□□ -0.12
PSEN1-225ENST00000560005 K7EMI3 77 aa14.32□□□□□ -0.12
PSEN1-225ENST00000560005 RPL32P62910 135 aaKnown RBP14.32□□□□□ -0.12
PSEN1-225ENST00000560005 SUMO4Q6EEV6 95 aa14.32□□□□□ -0.12
PSEN1-225ENST00000560005 TRAV26-2A0A0B4J265 109 aa14.31□□□□□ -0.12
PSEN1-225ENST00000560005 PLAC8L1A1L4L8 177 aa14.31□□□□□ -0.12
PSEN1-225ENST00000560005 PDZD11Q5EBL8 140 aa14.31□□□□□ -0.12
PSEN1-225ENST00000560005 C6orf223Q8N319 242 aa14.31□□□□□ -0.12
PSEN1-225ENST00000560005 Q8N8P6 123 aa14.31□□□□□ -0.12
PSEN1-225ENST00000560005 HIST1H2BLQ99880 126 aa14.31□□□□□ -0.12
PSEN1-225ENST00000560005 ST20Q9HBF5 79 aa14.31□□□□□ -0.12
PSEN1-225ENST00000560005 TRBV6-5A0A0K0K1A5 114 aa14.3□□□□□ -0.12
PSEN1-225ENST00000560005 LOC389332A0A1B0GUA5 103 aa14.3□□□□□ -0.12
PSEN1-225ENST00000560005 LYRM9A8MSI8 78 aa14.3□□□□□ -0.12
PSEN1-225ENST00000560005 FABP4P15090 132 aa14.3□□□□□ -0.12
PSEN1-225ENST00000560005 IFI27P40305 119 aaPredicted RBP14.3□□□□□ -0.12
PSEN1-225ENST00000560005 AKR1D1P51857 326 aa14.3□□□□□ -0.12
PSEN1-225ENST00000560005 LINC00310P59036 64 aa14.3□□□□□ -0.12
PSEN1-225ENST00000560005 SUMO2P61956 95 aaKnown RBP14.3□□□□□ -0.12
PSEN1-225ENST00000560005 UFSP1Q6NVU6 142 aa14.3□□□□□ -0.12
PSEN1-225ENST00000560005 TEX48A0A1B0GUV7 120 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms