RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 DEFB136Q30KP8 78 aa5.95□□□□□ -1.46
SMAD3-212ENST00000559937 DEFB114Q30KQ6 69 aa5.95□□□□□ -1.46
SMAD3-212ENST00000559937 MORN3Q6PF18 240 aaPredicted RBP5.95□□□□□ -1.46
SMAD3-212ENST00000559937 C18orf65Q6ZTR6 163 aa5.95□□□□□ -1.46
SMAD3-212ENST00000559937 Q6ZVH6 145 aa5.95□□□□□ -1.46
SMAD3-212ENST00000559937 OR11H2Q8NH07 326 aa5.95□□□□□ -1.46
SMAD3-212ENST00000559937 DLX4Q92988 240 aaPredicted RBP5.95□□□□□ -1.46
SMAD3-212ENST00000559937 RAX2Q96IS3 184 aa5.95□□□□□ -1.46
SMAD3-212ENST00000559937 SPXQ9BT56 116 aa5.95□□□□□ -1.46
SMAD3-212ENST00000559937 TM2D2Q9BX73 214 aa5.95□□□□□ -1.46
SMAD3-212ENST00000559937 C16orf95Q9H693 158 aa5.95□□□□□ -1.46
SMAD3-212ENST00000559937 TP53TG1Q9Y2A0 90 aa5.95□□□□□ -1.46
SMAD3-212ENST00000559937 K7EP13 123 aa5.94□□□□□ -1.46
SMAD3-212ENST00000559937 M0R2P5 195 aa5.94□□□□□ -1.46
SMAD3-212ENST00000559937 RHODO00212 210 aa5.94□□□□□ -1.46
SMAD3-212ENST00000559937 INSP01308 110 aa5.94□□□□□ -1.46
SMAD3-212ENST00000559937 CMC4P56277 68 aaPredicted RBP5.94□□□□□ -1.46
SMAD3-212ENST00000559937 HERVK_113P61574 105 aa5.94□□□□□ -1.46
SMAD3-212ENST00000559937 ZNF876PQ49A33 203 aa5.94□□□□□ -1.46
SMAD3-212ENST00000559937 FAM74A4Q5TZK3 123 aa5.94□□□□□ -1.46
SMAD3-212ENST00000559937 WFDC11Q8NEX6 87 aa5.94□□□□□ -1.46
SMAD3-212ENST00000559937 OR4C5Q8NGB2 326 aa5.94□□□□□ -1.46
SMAD3-212ENST00000559937 VPS13CQ709C8 3753 aa5.93□□□□□ -1.46
SMAD3-212ENST00000559937 TRAV8-6A0A0B4J262 113 aa5.93□□□□□ -1.46
SMAD3-212ENST00000559937 MYMXA0A1B0GTQ4 84 aa5.93□□□□□ -1.46
SMAD3-212ENST00000559937 RBMY1BA6NDE4 496 aaKnown RBP5.93□□□□□ -1.46
SMAD3-212ENST00000559937 RBMY1EA6NEQ0 496 aaKnown RBP5.93□□□□□ -1.46
SMAD3-212ENST00000559937 C11orf86A6NJI1 115 aa5.93□□□□□ -1.46
SMAD3-212ENST00000559937 I3L3M4 83 aa5.93□□□□□ -1.46
SMAD3-212ENST00000559937 RNASE1P07998 156 aaKnown RBP5.93□□□□□ -1.46
SMAD3-212ENST00000559937 RBMY1DP0C7P1 496 aaKnown RBP5.93□□□□□ -1.46
SMAD3-212ENST00000559937 SMIM13P0DJ93 91 aa5.93□□□□□ -1.46
SMAD3-212ENST00000559937 RBMY1A1P0DJD3 496 aaKnown RBP5.93□□□□□ -1.46
SMAD3-212ENST00000559937 RBMY1CP0DJD4 496 aa5.93□□□□□ -1.46
SMAD3-212ENST00000559937 CRYBA4P53673 196 aa5.93□□□□□ -1.46
SMAD3-212ENST00000559937 KRTAP1-1Q07627 177 aa5.93□□□□□ -1.46
SMAD3-212ENST00000559937 RBMY1FQ15415 496 aaKnown RBP5.93□□□□□ -1.46
SMAD3-212ENST00000559937 KHDC1LQ5JSQ8 128 aa5.93□□□□□ -1.46
SMAD3-212ENST00000559937 AMMECR1LQ6DCA0 310 aa5.93□□□□□ -1.46
SMAD3-212ENST00000559937 GTF2H5Q6ZYL4 71 aa5.93□□□□□ -1.46
SMAD3-212ENST00000559937 NFE4Q86UQ8 179 aa5.93□□□□□ -1.46
SMAD3-212ENST00000559937 CEND1Q8N111 149 aa5.93□□□□□ -1.46
SMAD3-212ENST00000559937 DUX3Q96PT4 197 aa5.93□□□□□ -1.46
SMAD3-212ENST00000559937 SONP18583 2426 aaKnown RBP5.93□□□□□ -1.46
SMAD3-212ENST00000559937 ATRQ13535 2644 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 HIVEP2P31629 2446 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 IGLV4-69A0A075B6H9 119 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 TSHBP01222 138 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 FOSL1P15407 271 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 GCSHP23434 173 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 TCTAP57738 103 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 BEAN1Q3B7T3 259 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 CD300EQ496F6 205 aaPredicted RBP5.92□□□□□ -1.46
SMAD3-212ENST00000559937 UFSP1Q6NVU6 142 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 NEGR1Q7Z3B1 354 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 MAPKAPK5-AS1Q8N8E1 139 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 C20orf203Q8NBC4 194 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 DNAJC30Q96LL9 226 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 PRADC1Q9BSG0 188 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 CST9LQ9H4G1 147 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 PYGO1Q9Y3Y4 419 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 TSSC4Q9Y5U2 329 aaPredicted RBP5.92□□□□□ -1.46
SMAD3-212ENST00000559937 SORL1Q92673 2214 aa5.92□□□□□ -1.46
SMAD3-212ENST00000559937 FN1P02751 2386 aaKnown RBP5.92□□□□□ -1.46
SMAD3-212ENST00000559937 TRBV7-3A0A075B6L6 115 aa5.91□□□□□ -1.46
SMAD3-212ENST00000559937 A0A1W2PPM0 123 aa5.91□□□□□ -1.46
SMAD3-212ENST00000559937 CCL24O00175 119 aa5.91□□□□□ -1.46
SMAD3-212ENST00000559937 FXYD2P54710 66 aa5.91□□□□□ -1.46
SMAD3-212ENST00000559937 OR5A1Q8NGJ0 315 aa5.91□□□□□ -1.46
SMAD3-212ENST00000559937 FAM110AQ9BQ89 295 aa5.91□□□□□ -1.46
SMAD3-212ENST00000559937 TTTY13Q9BZ97 58 aa5.91□□□□□ -1.46
SMAD3-212ENST00000559937 ESM1Q9NQ30 184 aa5.91□□□□□ -1.46
SMAD3-212ENST00000559937 A0A1B0GWB2 263 aa5.9□□□□□ -1.46
SMAD3-212ENST00000559937 GAGE10A6NGK3 116 aa5.9□□□□□ -1.46
SMAD3-212ENST00000559937 H3BUT2 72 aa5.9□□□□□ -1.46
SMAD3-212ENST00000559937 K7EP34 96 aa5.9□□□□□ -1.46
SMAD3-212ENST00000559937 RS1O15537 224 aa5.9□□□□□ -1.46
SMAD3-212ENST00000559937 NDUFA7O95182 113 aa5.9□□□□□ -1.46
SMAD3-212ENST00000559937 IGHV3-53P01767 116 aa5.9□□□□□ -1.46
SMAD3-212ENST00000559937 P0DMU3 169 aa5.9□□□□□ -1.46
SMAD3-212ENST00000559937 FAM231AP0DMU4 169 aa5.9□□□□□ -1.46
SMAD3-212ENST00000559937 FAM231CP0DMU5 169 aa5.9□□□□□ -1.46
SMAD3-212ENST00000559937 RPL39P62891 51 aaKnown RBP5.9□□□□□ -1.46
SMAD3-212ENST00000559937 ODF3L2Q3SX64 289 aa5.9□□□□□ -1.46
SMAD3-212ENST00000559937 C11orf72Q8NBR9 251 aa5.9□□□□□ -1.46
SMAD3-212ENST00000559937 PHLDA1Q8WV24 401 aaPredicted RBP5.9□□□□□ -1.46
SMAD3-212ENST00000559937 HIST1H4GQ99525 98 aa5.9□□□□□ -1.46
SMAD3-212ENST00000559937 YAE1D1Q9NRH1 226 aa5.9□□□□□ -1.46
SMAD3-212ENST00000559937 COL6A5A8TX70 2615 aa5.89□□□□□ -1.47
SMAD3-212ENST00000559937 TMEM238LA0A1B0GVL6 79 aa5.89□□□□□ -1.47
SMAD3-212ENST00000559937 A6NJY4 79 aa5.89□□□□□ -1.47
SMAD3-212ENST00000559937 ZNF815PA8K554 130 aa5.89□□□□□ -1.47
SMAD3-212ENST00000559937 CD28P10747 220 aa5.89□□□□□ -1.47
SMAD3-212ENST00000559937 FABP2P12104 132 aa5.89□□□□□ -1.47
SMAD3-212ENST00000559937 CFAP126Q5VTH2 177 aa5.89□□□□□ -1.47
SMAD3-212ENST00000559937 STHQ8IWL8 128 aa5.89□□□□□ -1.47
SMAD3-212ENST00000559937 LINC01006Q8NI28 216 aa5.89□□□□□ -1.47
SMAD3-212ENST00000559937 IL17DQ8TAD2 202 aa5.89□□□□□ -1.47
SMAD3-212ENST00000559937 ZNF418Q8TF45 676 aaPredicted RBP5.89□□□□□ -1.47
SMAD3-212ENST00000559937 LINC01587Q99440 93 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms