RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 FAM231AP0DMU4 169 aa7.39□□□□□ -1.23
LRRC28-216ENST00000559819 FAM231CP0DMU5 169 aa7.39□□□□□ -1.23
LRRC28-216ENST00000559819 PROK1P58294 105 aa7.39□□□□□ -1.23
LRRC28-216ENST00000559819 SCGB1D4Q6XE38 83 aa7.39□□□□□ -1.23
LRRC28-216ENST00000559819 MXRA5Q9NR99 2828 aa7.39□□□□□ -1.23
LRRC28-216ENST00000559819 ZNF469Q96JG9 3925 aaPredicted RBP7.39□□□□□ -1.23
LRRC28-216ENST00000559819 Q5PR19 223 aa7.39□□□□□ -1.23
LRRC28-216ENST00000559819 TMEM170BQ5T4T1 132 aa7.39□□□□□ -1.23
LRRC28-216ENST00000559819 TMEM141Q96I45 108 aa7.39□□□□□ -1.23
LRRC28-216ENST00000559819 PTPN13Q12923 2485 aa7.39□□□□□ -1.23
LRRC28-216ENST00000559819 CR1P17927 2039 aa7.39□□□□□ -1.23
LRRC28-216ENST00000559819 NBPF19A0A087WUL8 3843 aa7.38□□□□□ -1.23
LRRC28-216ENST00000559819 KHDC1LQ5JSQ8 128 aa7.38□□□□□ -1.23
LRRC28-216ENST00000559819 TIMM17AQ99595 171 aa7.38□□□□□ -1.23
LRRC28-216ENST00000559819 LINC01619G3V211 115 aa7.38□□□□□ -1.23
LRRC28-216ENST00000559819 TRPT1Q86TN4 253 aaKnown RBP7.38□□□□□ -1.23
LRRC28-216ENST00000559819 MTURNQ8N3F0 131 aa7.38□□□□□ -1.23
LRRC28-216ENST00000559819 ABCA12Q86UK0 2595 aa7.38□□□□□ -1.23
LRRC28-216ENST00000559819 RRN3P1Q2M238 152 aa7.37□□□□□ -1.23
LRRC28-216ENST00000559819 Q96MF0 132 aa7.37□□□□□ -1.23
LRRC28-216ENST00000559819 CREBBPQ92793 2442 aa7.37□□□□□ -1.23
LRRC28-216ENST00000559819 TRGV11A0A075B6L2 103 aa7.37□□□□□ -1.23
LRRC28-216ENST00000559819 RNF152Q8N8N0 203 aa7.37□□□□□ -1.23
LRRC28-216ENST00000559819 G3V4G9 280 aa7.36□□□□□ -1.23
LRRC28-216ENST00000559819 H3BMG7 143 aa7.36□□□□□ -1.23
LRRC28-216ENST00000559819 HERVK_113P61574 105 aa7.36□□□□□ -1.23
LRRC28-216ENST00000559819 RPL24P83731 157 aaKnown RBP7.36□□□□□ -1.23
LRRC28-216ENST00000559819 SRSF9Q13242 221 aaKnown RBP eCLIP7.36□□□□□ -1.23
LRRC28-216ENST00000559819 DEFB113Q30KQ7 82 aa7.36□□□□□ -1.23
LRRC28-216ENST00000559819 NSUN5P1Q3KNT7 163 aa7.36□□□□□ -1.23
LRRC28-216ENST00000559819 TMEM61Q8N0U2 210 aa7.36□□□□□ -1.23
LRRC28-216ENST00000559819 ZNF843Q8N446 348 aa7.36□□□□□ -1.23
LRRC28-216ENST00000559819 Q9UF83 564 aa7.36□□□□□ -1.23
LRRC28-216ENST00000559819 IGHV3-64A0A075B6Q5 118 aa7.36□□□□□ -1.23
LRRC28-216ENST00000559819 A0A1B0GWB2 263 aa7.36□□□□□ -1.23
LRRC28-216ENST00000559819 SFTA2Q6UW10 78 aa7.36□□□□□ -1.23
LRRC28-216ENST00000559819 NAV2Q8IVL1 2488 aa7.36□□□□□ -1.23
LRRC28-216ENST00000559819 H3BMM0 161 aa7.36□□□□□ -1.23
LRRC28-216ENST00000559819 WFDC2Q14508 124 aa7.36□□□□□ -1.23
LRRC28-216ENST00000559819 RHOHQ15669 191 aa7.36□□□□□ -1.23
LRRC28-216ENST00000559819 DLX4Q92988 240 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-216ENST00000559819 A0A0J9YY99 117 aa7.35□□□□□ -1.23
LRRC28-216ENST00000559819 TEX48A0A1B0GUV7 120 aa7.35□□□□□ -1.23
LRRC28-216ENST00000559819 I3L3M4 83 aa7.35□□□□□ -1.23
LRRC28-216ENST00000559819 PAPPA-AS1Q5QFB9 102 aa7.35□□□□□ -1.23
LRRC28-216ENST00000559819 C20orf203Q8NBC4 194 aa7.35□□□□□ -1.23
LRRC28-216ENST00000559819 PGPEP1Q9NXJ5 209 aa7.35□□□□□ -1.23
LRRC28-216ENST00000559819 LINC01549A6NIU2 74 aa7.35□□□□□ -1.23
LRRC28-216ENST00000559819 APOMO95445 188 aa7.35□□□□□ -1.23
LRRC28-216ENST00000559819 Q6ZSN1 163 aa7.35□□□□□ -1.23
LRRC28-216ENST00000559819 TEX15Q9BXT5 2789 aa7.34□□□□□ -1.23
LRRC28-216ENST00000559819 CEMP1Q6PRD7 247 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-216ENST00000559819 C11orf44Q8N8P7 122 aa7.34□□□□□ -1.23
LRRC28-216ENST00000559819 AMELXQ99217 191 aa7.34□□□□□ -1.23
LRRC28-216ENST00000559819 MAP6D1Q9H9H5 199 aa7.34□□□□□ -1.23
LRRC28-216ENST00000559819 UBR5O95071 2799 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-216ENST00000559819 IGLV4-3A0A075B6K6 122 aa7.34□□□□□ -1.23
LRRC28-216ENST00000559819 A0A0J9YXV3 536 aa7.34□□□□□ -1.23
LRRC28-216ENST00000559819 RNASE13Q5GAN3 156 aaKnown RBP7.34□□□□□ -1.23
LRRC28-216ENST00000559819 MRPL16Q9NX20 251 aaKnown RBP7.34□□□□□ -1.23
LRRC28-216ENST00000559819 J3QQQ9 107 aa7.33□□□□□ -1.24
LRRC28-216ENST00000559819 KRTAP1-3Q8IUG1 177 aa7.33□□□□□ -1.24
LRRC28-216ENST00000559819 Q8N2B8 174 aa7.33□□□□□ -1.24
LRRC28-216ENST00000559819 DYNLRB2Q8TF09 96 aa7.33□□□□□ -1.24
LRRC28-216ENST00000559819 SPAG8Q99932 426 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-216ENST00000559819 TSPAN13O95857 204 aa7.33□□□□□ -1.24
LRRC28-216ENST00000559819 CD28P10747 220 aa7.33□□□□□ -1.24
LRRC28-216ENST00000559819 UBE2D1P51668 147 aa7.33□□□□□ -1.24
LRRC28-216ENST00000559819 SH2D6Q7Z4S9 175 aa7.33□□□□□ -1.24
LRRC28-216ENST00000559819 NFE4Q86UQ8 179 aa7.33□□□□□ -1.24
LRRC28-216ENST00000559819 C4orf3Q8WVX3 66 aa7.33□□□□□ -1.24
LRRC28-216ENST00000559819 TMEM223A0PJW6 202 aa7.32□□□□□ -1.24
LRRC28-216ENST00000559819 ZNF22P17026 224 aaPredicted RBP7.32□□□□□ -1.24
LRRC28-216ENST00000559819 LGALS3P17931 250 aaKnown RBP7.32□□□□□ -1.24
LRRC28-216ENST00000559819 FAM104AQ969W3 186 aa7.32□□□□□ -1.24
LRRC28-216ENST00000559819 PEMTQ9UBM1 199 aa7.32□□□□□ -1.24
LRRC28-216ENST00000559819 A8MTW9 85 aa7.32□□□□□ -1.24
LRRC28-216ENST00000559819 IGHV3-30P01768 117 aa7.32□□□□□ -1.24
LRRC28-216ENST00000559819 IGHV3-30-5P0DP03 117 aa7.32□□□□□ -1.24
LRRC28-216ENST00000559819 LINC01587Q99440 93 aa7.32□□□□□ -1.24
LRRC28-216ENST00000559819 A0A1W2PRX2 142 aa7.31□□□□□ -1.24
LRRC28-216ENST00000559819 VCX2Q9H322 139 aa7.31□□□□□ -1.24
LRRC28-216ENST00000559819 SPANXB1Q9NS25 103 aaPredicted RBP7.31□□□□□ -1.24
LRRC28-216ENST00000559819 PRRC2AP48634 2157 aaKnown RBP7.31□□□□□ -1.24
LRRC28-216ENST00000559819 CUBNO60494 3623 aa7.31□□□□□ -1.24
LRRC28-216ENST00000559819 IGHV3-38A0A0C4DH36 116 aa7.31□□□□□ -1.24
LRRC28-216ENST00000559819 M0R2P5 195 aa7.31□□□□□ -1.24
LRRC28-216ENST00000559819 RHODO00212 210 aa7.31□□□□□ -1.24
LRRC28-216ENST00000559819 DEFB114Q30KQ6 69 aa7.31□□□□□ -1.24
LRRC28-216ENST00000559819 GAGE13Q4V321 117 aa7.31□□□□□ -1.24
LRRC28-216ENST00000559819 Q6ZSV7 163 aa7.31□□□□□ -1.24
LRRC28-216ENST00000559819 PRO0461Q9UI25 63 aa7.31□□□□□ -1.24
LRRC28-216ENST00000559819 TLN2Q9Y4G6 2542 aa7.31□□□□□ -1.24
LRRC28-216ENST00000559819 KMT2BQ9UMN6 2715 aaPredicted RBP7.31□□□□□ -1.24
LRRC28-216ENST00000559819 MYO9AB2RTY4 2548 aa7.31□□□□□ -1.24
LRRC28-216ENST00000559819 LOC107984156A0A0G2JMH3 177 aa7.3□□□□□ -1.24
LRRC28-216ENST00000559819 F8W1H4 67 aa7.3□□□□□ -1.24
LRRC28-216ENST00000559819 ZNF415Q09FC8 603 aa7.3□□□□□ -1.24
LRRC28-216ENST00000559819 ETDBQ3ZM63 59 aa7.3□□□□□ -1.24
LRRC28-216ENST00000559819 CFAP126Q5VTH2 177 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms