RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 Q6ZTI0 123 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 MRPL52Q86TS9 123 aaKnown RBP3.97□□□□□ -1.77
USP3-215ENST00000559771 TMEM75Q8N9X5 138 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 C11orf72Q8NBR9 251 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 DAZAP1Q96EP5 407 aaKnown RBP3.97□□□□□ -1.77
USP3-215ENST00000559771 C20orf144Q9BQM9 153 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 MRPS16Q9Y3D3 137 aaKnown RBP3.97□□□□□ -1.77
USP3-215ENST00000559771 MYCBP2O75592 4640 aa3.96□□□□□ -1.77
USP3-215ENST00000559771 TRBV19A0A075B6N1 114 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 GAGE12BA1L429 117 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 C19orf71A6NCJ1 209 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 ZNF324O75467 553 aaPredicted RBP3.96□□□□□ -1.78
USP3-215ENST00000559771 GAGE7O76087 117 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 P01737 135 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 APCSP02743 223 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 GAGE12FP0CL80 117 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 GAGE12GP0CL81 117 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 GAGE12IP0CL82 117 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 CSN1S1P47710 185 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 XGP55808 180 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 LINC00315P59091 139 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 RAB4BP61018 213 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 PDZD11Q5EBL8 140 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 Q6ZQT7 251 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 COX8CQ7Z4L0 72 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 BAGE3Q86Y29 109 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 FAM19A4Q96LR4 140 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 SLC50A1Q9BRV3 221 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 RNASE7Q9H1E1 156 aaKnown RBP3.96□□□□□ -1.78
USP3-215ENST00000559771 RPP21Q9H633 154 aaKnown RBP3.96□□□□□ -1.78
USP3-215ENST00000559771 AAMDCQ9H7C9 122 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 ZNF586Q9NXT0 402 aa3.96□□□□□ -1.78
USP3-215ENST00000559771 TRAV12-3A0A0B4J271 114 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 A0A1B0GXF2 115 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 HIGD1CA8MV81 97 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 LINC00587B1AMM8 73 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 J3KRW8 73 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 PMCHP20382 165 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 DDTP30046 118 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 HBBP68871 147 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 DAZ2Q13117 558 aaKnown RBP3.95□□□□□ -1.78
USP3-215ENST00000559771 SAPCD1Q5SSQ6 148 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 PRR9Q5T870 116 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 GATD1Q8NB37 220 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 NHLRC2Q8NBF2 726 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 NUP35Q8NFH5 326 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 OR10J6PQ8NGY7 276 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 BLNKQ8WV28 456 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 C18orf15Q96N68 181 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 ODF3Q96PU9 254 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 NDFIP1Q9BT67 221 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 PPP1R14DQ9NXH3 145 aa3.95□□□□□ -1.78
USP3-215ENST00000559771 SRRM2Q9UQ35 2752 aaKnown RBP3.94□□□□□ -1.78
USP3-215ENST00000559771 C9orf118A6NHY6 69 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 KLLNB2CW77 178 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 M0R3E3 92 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 SPINK4O60575 86 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 SERF1AO75920 110 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 IGLV2-11P01706 119 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 GPX1P07203 203 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 OR5AL1P0C617 328 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 KRTAP10-1P60331 282 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 RPS20P60866 119 aaKnown RBP3.94□□□□□ -1.78
USP3-215ENST00000559771 ERCC8Q13216 396 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 TTC32Q5I0X7 151 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 Q86TA4 180 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 SVIPQ8NHG7 77 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 CHCHD1Q96BP2 118 aaKnown RBP3.94□□□□□ -1.78
USP3-215ENST00000559771 MRPL53Q96EL3 112 aaKnown RBP3.94□□□□□ -1.78
USP3-215ENST00000559771 KCNS1Q96KK3 526 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 LINC00479Q96M42 142 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 LINC00467Q9BRT7 94 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 SAMD10Q9BYL1 202 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 AGPAT4-IT1Q9H0P7 198 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 NAGKQ9UJ70 344 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 TP53TG3Q9ULZ0 132 aa3.94□□□□□ -1.78
USP3-215ENST00000559771 DNAH8Q96JB1 4490 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 TRAV34A0A0B4J273 112 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 C20orf202A1L168 122 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 C7orf71A4D174 169 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 RBAKDNA6NC62 111 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 DIRC3C9JPN6 131 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 SCGB1D1O95968 90 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 DNAH10OSP0CZ25 163 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 LEPP41159 167 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 TCL1AP56279 114 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 RIGQ13278 110 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 PMCHL1Q16048 86 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 RNF151Q2KHN1 245 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 ANXA2RQ3ZCQ2 193 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 TEX43Q6ZNM6 134 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 ZNF664Q8N3J9 261 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 ZFAND2AQ8N6M9 145 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 BORCS7Q96B45 105 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 PSG8Q9UQ74 426 aa3.93□□□□□ -1.78
USP3-215ENST00000559771 TRGV1A0A0A0MS02 117 aa3.92□□□□□ -1.78
USP3-215ENST00000559771 A0A1B0GUT8 65 aa3.92□□□□□ -1.78
USP3-215ENST00000559771 GRIFINA4D1Z8 144 aa3.92□□□□□ -1.78
USP3-215ENST00000559771 EPM2AB3EWF7 344 aa3.92□□□□□ -1.78
USP3-215ENST00000559771 SIVA1O15304 175 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms