RNA–Protein interactions for RNA: ENST00000559737.5

USP3-AS1-203, USP3 antisense RNA 1, humanhuman

TSL 1 (best)

Gene USP3-AS1, Length 1,434 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-203ENST00000559737 GAGE13Q4V321 117 aa12.98□□□□□ -0.33
USP3-AS1-203ENST00000559737 NEXN-AS1Q8NBZ9 246 aa12.98□□□□□ -0.33
USP3-AS1-203ENST00000559737 ICOSQ9Y6W8 199 aa12.98□□□□□ -0.33
USP3-AS1-203ENST00000559737 SMKR1H3BMG3 65 aa12.97□□□□□ -0.33
USP3-AS1-203ENST00000559737 C15orf53Q8NAA6 179 aa12.97□□□□□ -0.33
USP3-AS1-203ENST00000559737 TRBV10-1A0A0K0K1A3 114 aa12.96□□□□□ -0.33
USP3-AS1-203ENST00000559737 H7C1H1 209 aa12.96□□□□□ -0.33
USP3-AS1-203ENST00000559737 NCR2O95944 276 aa12.96□□□□□ -0.33
USP3-AS1-203ENST00000559737 MRPL23Q16540 153 aaKnown RBP12.96□□□□□ -0.33
USP3-AS1-203ENST00000559737 ZNRF2Q8NHG8 242 aa12.96□□□□□ -0.33
USP3-AS1-203ENST00000559737 RPL39LQ96EH5 51 aaKnown RBP12.96□□□□□ -0.33
USP3-AS1-203ENST00000559737 MRAP2Q96G30 205 aa12.96□□□□□ -0.34
USP3-AS1-203ENST00000559737 GNB1LQ9BYB4 327 aa12.96□□□□□ -0.34
USP3-AS1-203ENST00000559737 LINC00694P0DN24 101 aa12.95□□□□□ -0.34
USP3-AS1-203ENST00000559737 SRIP30626 198 aa12.95□□□□□ -0.34
USP3-AS1-203ENST00000559737 RPS10P46783 165 aaKnown RBP12.95□□□□□ -0.34
USP3-AS1-203ENST00000559737 RPL36AP83881 106 aaKnown RBP12.95□□□□□ -0.34
USP3-AS1-203ENST00000559737 RPL36ALQ969Q0 106 aaKnown RBP12.95□□□□□ -0.34
USP3-AS1-203ENST00000559737 NIT2Q9NQR4 276 aa12.95□□□□□ -0.34
USP3-AS1-203ENST00000559737 TRBV7-3A0A075B6L6 115 aa12.94□□□□□ -0.34
USP3-AS1-203ENST00000559737 TCTAP57738 103 aa12.94□□□□□ -0.34
USP3-AS1-203ENST00000559737 COX19Q49B96 90 aa12.94□□□□□ -0.34
USP3-AS1-203ENST00000559737 FRZBQ92765 325 aa12.94□□□□□ -0.34
USP3-AS1-203ENST00000559737 D6R8Y8 96 aa12.93□□□□□ -0.34
USP3-AS1-203ENST00000559737 HLA-DQA1P01909 254 aa12.93□□□□□ -0.34
USP3-AS1-203ENST00000559737 CKS2P33552 79 aa12.93□□□□□ -0.34
USP3-AS1-203ENST00000559737 UBE2D3P61077 147 aa12.92□□□□□ -0.34
USP3-AS1-203ENST00000559737 UBE2D2P62837 147 aa12.92□□□□□ -0.34
USP3-AS1-203ENST00000559737 KIAA1644Q3SXP7 199 aa12.92□□□□□ -0.34
USP3-AS1-203ENST00000559737 NEGR1Q7Z3B1 354 aa12.92□□□□□ -0.34
USP3-AS1-203ENST00000559737 NRACQ8N912 160 aa12.92□□□□□ -0.34
USP3-AS1-203ENST00000559737 DNAJC30Q96LL9 226 aa12.92□□□□□ -0.34
USP3-AS1-203ENST00000559737 TNFRSF18Q9Y5U5 241 aa12.92□□□□□ -0.34
USP3-AS1-203ENST00000559737 COLCA2A8K830 154 aa12.91□□□□□ -0.34
USP3-AS1-203ENST00000559737 APCSP02743 223 aa12.91□□□□□ -0.34
USP3-AS1-203ENST00000559737 OR10J3Q5JRS4 329 aa12.91□□□□□ -0.34
USP3-AS1-203ENST00000559737 ATP6V0E2Q8NHE4 81 aa12.91□□□□□ -0.34
USP3-AS1-203ENST00000559737 MRPL18Q9H0U6 180 aaKnown RBP12.91□□□□□ -0.34
USP3-AS1-203ENST00000559737 IGHV3-38A0A0C4DH36 116 aa12.9□□□□□ -0.34
USP3-AS1-203ENST00000559737 MT-ND6P03923 174 aa12.9□□□□□ -0.34
USP3-AS1-203ENST00000559737 ORMDL3Q8N138 153 aa12.9□□□□□ -0.34
USP3-AS1-203ENST00000559737 TRBV6-5A0A0K0K1A5 114 aa12.89□□□□□ -0.35
USP3-AS1-203ENST00000559737 PPBPP02775 128 aa12.89□□□□□ -0.35
USP3-AS1-203ENST00000559737 ESRGQ1W209 222 aa12.89□□□□□ -0.35
USP3-AS1-203ENST00000559737 TRAPPC1Q9Y5R8 145 aa12.89□□□□□ -0.35
USP3-AS1-203ENST00000559737 NPYP01303 97 aa12.88□□□□□ -0.35
USP3-AS1-203ENST00000559737 FABP9Q0Z7S8 132 aa12.88□□□□□ -0.35
USP3-AS1-203ENST00000559737 LYPD5Q6UWN5 251 aa12.88□□□□□ -0.35
USP3-AS1-203ENST00000559737 SH2D6Q7Z4S9 175 aa12.88□□□□□ -0.35
USP3-AS1-203ENST00000559737 PRELID3AQ96N28 172 aa12.88□□□□□ -0.35
USP3-AS1-203ENST00000559737 TNFRSF6BO95407 300 aa12.88□□□□□ -0.35
USP3-AS1-203ENST00000559737 DEFB104AQ8WTQ1 72 aa12.88□□□□□ -0.35
USP3-AS1-203ENST00000559737 LYSTQ99698 3801 aa12.88□□□□□ -0.35
USP3-AS1-203ENST00000559737 ST20Q9HBF5 79 aa12.88□□□□□ -0.35
USP3-AS1-203ENST00000559737 SDHAF1A6NFY7 115 aa12.87□□□□□ -0.35
USP3-AS1-203ENST00000559737 PPP1R17O96001 155 aa12.87□□□□□ -0.35
USP3-AS1-203ENST00000559737 GTSF1LQ9H1H1 148 aa12.87□□□□□ -0.35
USP3-AS1-203ENST00000559737 TMEM70Q9BUB7 260 aa12.86□□□□□ -0.35
USP3-AS1-203ENST00000559737 LINC00588Q9Y4M8 146 aa12.86□□□□□ -0.35
USP3-AS1-203ENST00000559737 RAB5AP20339 215 aa12.85□□□□□ -0.35
USP3-AS1-203ENST00000559737 POLR2KP53803 58 aaKnown RBP12.85□□□□□ -0.35
USP3-AS1-203ENST00000559737 CCL18P55774 89 aa12.85□□□□□ -0.35
USP3-AS1-203ENST00000559737 SUMO2P61956 95 aaKnown RBP12.85□□□□□ -0.35
USP3-AS1-203ENST00000559737 DAZ4Q86SG3 579 aaKnown RBP12.85□□□□□ -0.35
USP3-AS1-203ENST00000559737 DAZ3Q9NR90 486 aaKnown RBP12.85□□□□□ -0.35
USP3-AS1-203ENST00000559737 PHOX2AO14813 284 aa12.84□□□□□ -0.35
USP3-AS1-203ENST00000559737 ALKBH7Q9BT30 221 aaPredicted RBP12.84□□□□□ -0.35
USP3-AS1-203ENST00000559737 NTM-AS1Q6ZSK4 140 aa12.83□□□□□ -0.36
USP3-AS1-203ENST00000559737 C20orf78Q9BR46 151 aa12.83□□□□□ -0.36
USP3-AS1-203ENST00000559737 LAMTOR2Q9Y2Q5 125 aa12.83□□□□□ -0.36
USP3-AS1-203ENST00000559737 PMCHP20382 165 aa12.82□□□□□ -0.36
USP3-AS1-203ENST00000559737 TIRAPP58753 221 aa12.82□□□□□ -0.36
USP3-AS1-203ENST00000559737 UBE2DNLQ8IWF7 75 aa12.82□□□□□ -0.36
USP3-AS1-203ENST00000559737 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.82□□□□□ -0.36
USP3-AS1-203ENST00000559737 VPS13DQ5THJ4 4388 aa12.82□□□□□ -0.36
USP3-AS1-203ENST00000559737 TRBV27A0A0K0K1C4 114 aa12.81□□□□□ -0.36
USP3-AS1-203ENST00000559737 TRGC2P03986 189 aa12.81□□□□□ -0.36
USP3-AS1-203ENST00000559737 ALMS1Q8TCU4 4167 aa12.81□□□□□ -0.36
USP3-AS1-203ENST00000559737 LOC389332A0A1B0GUA5 103 aa12.8□□□□□ -0.36
USP3-AS1-203ENST00000559737 I3L3M4 83 aa12.8□□□□□ -0.36
USP3-AS1-203ENST00000559737 VCYO14598 125 aa12.8□□□□□ -0.36
USP3-AS1-203ENST00000559737 LELP1Q5T871 98 aa12.8□□□□□ -0.36
USP3-AS1-203ENST00000559737 LGALS9CQ6DKI2 356 aa12.8□□□□□ -0.36
USP3-AS1-203ENST00000559737 SMIM2Q9BVW6 85 aa12.8□□□□□ -0.36
USP3-AS1-203ENST00000559737 MAP1LC3AQ9H492 121 aa12.8□□□□□ -0.36
USP3-AS1-203ENST00000559737 MRPS16Q9Y3D3 137 aaKnown RBP12.8□□□□□ -0.36
USP3-AS1-203ENST00000559737 TRBV6-8A0A0A6YYG3 113 aa12.79□□□□□ -0.36
USP3-AS1-203ENST00000559737 RPL32P62910 135 aaKnown RBP12.79□□□□□ -0.36
USP3-AS1-203ENST00000559737 COTL1Q14019 142 aa12.79□□□□□ -0.36
USP3-AS1-203ENST00000559737 LINC00476Q8WZB0 136 aa12.79□□□□□ -0.36
USP3-AS1-203ENST00000559737 PRSS47A8MTI9 375 aa12.79□□□□□ -0.36
USP3-AS1-203ENST00000559737 LY6G6CO95867 125 aa12.79□□□□□ -0.36
USP3-AS1-203ENST00000559737 TSHBP01222 138 aa12.79□□□□□ -0.36
USP3-AS1-203ENST00000559737 DNAH1Q9P2D7 4330 aa12.78□□□□□ -0.36
USP3-AS1-203ENST00000559737 IGLV2-18A0A075B6J9 118 aa12.78□□□□□ -0.36
USP3-AS1-203ENST00000559737 TMEM97Q5BJF2 176 aa12.78□□□□□ -0.36
USP3-AS1-203ENST00000559737 WFDC10BQ8IUB3 73 aa12.78□□□□□ -0.36
USP3-AS1-203ENST00000559737 UPK3BQ9BT76 320 aa12.77□□□□□ -0.37
USP3-AS1-203ENST00000559737 TRBV25-1A0A075B6N4 114 aa12.76□□□□□ -0.37
USP3-AS1-203ENST00000559737 TRAV8-6A0A0B4J262 113 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms