RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PRAC2D3DTV9 90 aa8.11□□□□□ -1.11
CARMIL3-202ENST00000559694 PHLDA1Q8WV24 401 aaPredicted RBP8.11□□□□□ -1.11
CARMIL3-202ENST00000559694 TRAV26-1A0A087WT03 109 aa8.11□□□□□ -1.11
CARMIL3-202ENST00000559694 INSL3P51460 131 aa8.11□□□□□ -1.11
CARMIL3-202ENST00000559694 MSRB1Q9NZV6 116 aa8.11□□□□□ -1.11
CARMIL3-202ENST00000559694 SS18L2Q9UHA2 77 aa8.11□□□□□ -1.11
CARMIL3-202ENST00000559694 DSCAML1Q8TD84 2053 aa8.11□□□□□ -1.11
CARMIL3-202ENST00000559694 OR13C6PQ8NH95 151 aa8.1□□□□□ -1.11
CARMIL3-202ENST00000559694 TRAV25A0A0B4J276 109 aa8.1□□□□□ -1.11
CARMIL3-202ENST00000559694 PSMB8P28062 276 aa8.1□□□□□ -1.11
CARMIL3-202ENST00000559694 GNRH2O43555 120 aa8.1□□□□□ -1.11
CARMIL3-202ENST00000559694 SMIM2Q9BVW6 85 aa8.1□□□□□ -1.11
CARMIL3-202ENST00000559694 TP53TG1Q9Y2A0 90 aa8.1□□□□□ -1.11
CARMIL3-202ENST00000559694 SMAD5-AS1Q9Y6J3 95 aa8.1□□□□□ -1.11
CARMIL3-202ENST00000559694 C19orf71A6NCJ1 209 aa8.1□□□□□ -1.11
CARMIL3-202ENST00000559694 SPRY2O43597 315 aa8.1□□□□□ -1.11
CARMIL3-202ENST00000559694 PLEKHB2Q96CS7 222 aa8.1□□□□□ -1.11
CARMIL3-202ENST00000559694 MRPL53Q96EL3 112 aaKnown RBP8.1□□□□□ -1.11
CARMIL3-202ENST00000559694 PRO1854Q9UHT4 67 aa8.1□□□□□ -1.11
CARMIL3-202ENST00000559694 ITPR3Q14573 2671 aa8.09□□□□□ -1.11
CARMIL3-202ENST00000559694 SLC25A20O43772 301 aa8.09□□□□□ -1.11
CARMIL3-202ENST00000559694 Q8N976 141 aa8.09□□□□□ -1.11
CARMIL3-202ENST00000559694 TOMM7Q9P0U1 55 aa8.09□□□□□ -1.11
CARMIL3-202ENST00000559694 TRAV8-3A0A0A6YYJ7 113 aa8.09□□□□□ -1.11
CARMIL3-202ENST00000559694 FGF6P10767 208 aa8.09□□□□□ -1.11
CARMIL3-202ENST00000559694 GAGE5Q13069 117 aa8.09□□□□□ -1.11
CARMIL3-202ENST00000559694 GAGE6Q13070 117 aa8.09□□□□□ -1.11
CARMIL3-202ENST00000559694 C18orf65Q6ZTR6 163 aa8.09□□□□□ -1.11
CARMIL3-202ENST00000559694 NOP10Q9NPE3 64 aaKnown RBP8.09□□□□□ -1.11
CARMIL3-202ENST00000559694 CHD6Q8TD26 2715 aa8.09□□□□□ -1.12
CARMIL3-202ENST00000559694 GAGE12JA6NER3 117 aa8.08□□□□□ -1.12
CARMIL3-202ENST00000559694 GAGE4Q13068 117 aa8.08□□□□□ -1.12
CARMIL3-202ENST00000559694 HIGD1BQ9P298 99 aa8.08□□□□□ -1.12
CARMIL3-202ENST00000559694 LENEPQ9Y5L5 61 aa8.08□□□□□ -1.12
CARMIL3-202ENST00000559694 IFITM1P13164 125 aa8.08□□□□□ -1.12
CARMIL3-202ENST00000559694 SPXQ9BT56 116 aa8.08□□□□□ -1.12
CARMIL3-202ENST00000559694 REV3LO60673 3130 aa8.08□□□□□ -1.12
CARMIL3-202ENST00000559694 RHODO00212 210 aa8.08□□□□□ -1.12
CARMIL3-202ENST00000559694 CRYBA4P53673 196 aa8.08□□□□□ -1.12
CARMIL3-202ENST00000559694 NEGR1Q7Z3B1 354 aa8.08□□□□□ -1.12
CARMIL3-202ENST00000559694 TRBV7-9A0A0J9YWB2 115 aa8.07□□□□□ -1.12
CARMIL3-202ENST00000559694 DEFB135Q30KP9 77 aa8.07□□□□□ -1.12
CARMIL3-202ENST00000559694 DEFB114Q30KQ6 69 aa8.07□□□□□ -1.12
CARMIL3-202ENST00000559694 FLNAP21333 2647 aaKnown RBP8.07□□□□□ -1.12
CARMIL3-202ENST00000559694 ATRQ13535 2644 aa8.07□□□□□ -1.12
CARMIL3-202ENST00000559694 H3BMM0 161 aa8.07□□□□□ -1.12
CARMIL3-202ENST00000559694 PMVKQ15126 192 aa8.07□□□□□ -1.12
CARMIL3-202ENST00000559694 NTN5Q8WTR8 489 aaPredicted RBP8.07□□□□□ -1.12
CARMIL3-202ENST00000559694 UBE2WQ96B02 151 aa8.07□□□□□ -1.12
CARMIL3-202ENST00000559694 ADARB2-AS1A8MUL3 147 aa8.07□□□□□ -1.12
CARMIL3-202ENST00000559694 MAP1AP78559 2803 aaPredicted RBP8.07□□□□□ -1.12
CARMIL3-202ENST00000559694 PRSS29PA6NIE9 313 aa8.06□□□□□ -1.12
CARMIL3-202ENST00000559694 CRPP02741 224 aa8.06□□□□□ -1.12
CARMIL3-202ENST00000559694 IGSF10Q6WRI0 2623 aa8.06□□□□□ -1.12
CARMIL3-202ENST00000559694 RBAKDNA6NC62 111 aa8.06□□□□□ -1.12
CARMIL3-202ENST00000559694 FOXI1Q12951 378 aa8.06□□□□□ -1.12
CARMIL3-202ENST00000559694 U3KQE9 123 aa8.06□□□□□ -1.12
CARMIL3-202ENST00000559694 ODF1Q14990 250 aa8.06□□□□□ -1.12
CARMIL3-202ENST00000559694 MLST8Q9BVC4 326 aa8.06□□□□□ -1.12
CARMIL3-202ENST00000559694 C20orf78Q9BR46 151 aa8.05□□□□□ -1.12
CARMIL3-202ENST00000559694 LGALS9O00182 355 aa8.05□□□□□ -1.12
CARMIL3-202ENST00000559694 MORN3Q6PF18 240 aaPredicted RBP8.05□□□□□ -1.12
CARMIL3-202ENST00000559694 TIMM21Q9BVV7 248 aa8.05□□□□□ -1.12
CARMIL3-202ENST00000559694 A0A096LPF7 62 aa8.05□□□□□ -1.12
CARMIL3-202ENST00000559694 DEFB4AO15263 64 aa8.05□□□□□ -1.12
CARMIL3-202ENST00000559694 IGLV1-40P01703 118 aa8.05□□□□□ -1.12
CARMIL3-202ENST00000559694 ZNRF2Q8NHG8 242 aa8.05□□□□□ -1.12
CARMIL3-202ENST00000559694 TEP1Q99973 2627 aaKnown RBP8.04□□□□□ -1.12
CARMIL3-202ENST00000559694 TEN1Q86WV5 123 aa8.04□□□□□ -1.12
CARMIL3-202ENST00000559694 MAP6D1Q9H9H5 199 aa8.04□□□□□ -1.12
CARMIL3-202ENST00000559694 SPANXA1Q9NS26 97 aa8.04□□□□□ -1.12
CARMIL3-202ENST00000559694 C9orf153Q5TBE3 101 aa8.04□□□□□ -1.12
CARMIL3-202ENST00000559694 C15orf53Q8NAA6 179 aa8.04□□□□□ -1.12
CARMIL3-202ENST00000559694 ZFAND3Q9H8U3 227 aa8.04□□□□□ -1.12
CARMIL3-202ENST00000559694 CELSR3Q9NYQ7 3312 aa8.04□□□□□ -1.12
CARMIL3-202ENST00000559694 DNAH14Q0VDD8 3507 aa8.04□□□□□ -1.12
CARMIL3-202ENST00000559694 A0A0J9YX75 114 aa8.04□□□□□ -1.12
CARMIL3-202ENST00000559694 J3QQQ9 107 aa8.04□□□□□ -1.12
CARMIL3-202ENST00000559694 SMIM20Q8N5G0 67 aa8.04□□□□□ -1.12
CARMIL3-202ENST00000559694 PTH2Q96A98 100 aa8.04□□□□□ -1.12
CARMIL3-202ENST00000559694 EDA2RQ9HAV5 297 aa8.04□□□□□ -1.12
CARMIL3-202ENST00000559694 A0A0J9YY99 117 aa8.03□□□□□ -1.12
CARMIL3-202ENST00000559694 SDHAF1A6NFY7 115 aa8.03□□□□□ -1.12
CARMIL3-202ENST00000559694 MALP21145 153 aa8.03□□□□□ -1.12
CARMIL3-202ENST00000559694 C2orf91Q6ZV80 131 aa8.03□□□□□ -1.12
CARMIL3-202ENST00000559694 IGHV3-38A0A0C4DH36 116 aa8.03□□□□□ -1.12
CARMIL3-202ENST00000559694 K7EQG2 157 aa8.03□□□□□ -1.12
CARMIL3-202ENST00000559694 ZNF493Q6ZR52 646 aa8.03□□□□□ -1.12
CARMIL3-202ENST00000559694 PAX4O43316 350 aa8.02□□□□□ -1.12
CARMIL3-202ENST00000559694 TRPT1Q86TN4 253 aaKnown RBP8.02□□□□□ -1.12
CARMIL3-202ENST00000559694 ESM1Q9NQ30 184 aa8.02□□□□□ -1.12
CARMIL3-202ENST00000559694 MGAM2Q2M2H8 2515 aa8.02□□□□□ -1.13
CARMIL3-202ENST00000559694 NDUFA7O95182 113 aa8.02□□□□□ -1.13
CARMIL3-202ENST00000559694 TMEM141Q96I45 108 aa8.02□□□□□ -1.13
CARMIL3-202ENST00000559694 FRYLO94915 3013 aa8.02□□□□□ -1.13
CARMIL3-202ENST00000559694 CFC1BP0CG36 223 aa8.02□□□□□ -1.13
CARMIL3-202ENST00000559694 CFC1P0CG37 223 aa8.02□□□□□ -1.13
CARMIL3-202ENST00000559694 C9orf47Q6ZRZ4 202 aa8.02□□□□□ -1.13
CARMIL3-202ENST00000559694 SPART-AS1P0CW21 52 aa8.02□□□□□ -1.13
CARMIL3-202ENST00000559694 LINC00482Q8N8I6 264 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms