RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 TRBV6-5A0A0K0K1A5 114 aa8.11□□□□□ -1.11
SPG11-217ENST00000559511 TRBV27A0A0K0K1C4 114 aa8.11□□□□□ -1.11
SPG11-217ENST00000559511 CD28P10747 220 aa8.11□□□□□ -1.11
SPG11-217ENST00000559511 HTN1P15515 57 aa8.11□□□□□ -1.11
SPG11-217ENST00000559511 LINC01006Q8NI28 216 aa8.11□□□□□ -1.11
SPG11-217ENST00000559511 CYSLTR1Q9Y271 337 aa8.11□□□□□ -1.11
SPG11-217ENST00000559511 TP53TG1Q9Y2A0 90 aa8.11□□□□□ -1.11
SPG11-217ENST00000559511 PRSS29PA6NIE9 313 aa8.11□□□□□ -1.11
SPG11-217ENST00000559511 RPL39P62891 51 aaKnown RBP8.11□□□□□ -1.11
SPG11-217ENST00000559511 SCGB2A2Q13296 93 aa8.11□□□□□ -1.11
SPG11-217ENST00000559511 CD300EQ496F6 205 aaPredicted RBP8.11□□□□□ -1.11
SPG11-217ENST00000559511 RAX2Q96IS3 184 aa8.11□□□□□ -1.11
SPG11-217ENST00000559511 KIR2DL4Q99706 377 aa8.11□□□□□ -1.11
SPG11-217ENST00000559511 C16orf95Q9H693 158 aa8.11□□□□□ -1.11
SPG11-217ENST00000559511 HIGD1BQ9P298 99 aa8.11□□□□□ -1.11
SPG11-217ENST00000559511 TRAV8-6A0A0B4J262 113 aa8.1□□□□□ -1.11
SPG11-217ENST00000559511 IGIPA6NJ69 53 aa8.1□□□□□ -1.11
SPG11-217ENST00000559511 CHAC1Q9BUX1 264 aa8.1□□□□□ -1.11
SPG11-217ENST00000559511 ZNF256Q9Y2P7 627 aaPredicted RBP8.1□□□□□ -1.11
SPG11-217ENST00000559511 SETD2Q9BYW2 2564 aaPredicted RBP8.1□□□□□ -1.11
SPG11-217ENST00000559511 A0A1W2PRX2 142 aa8.09□□□□□ -1.11
SPG11-217ENST00000559511 A6NDN8 102 aa8.09□□□□□ -1.11
SPG11-217ENST00000559511 LY6G6DO95868 133 aa8.09□□□□□ -1.11
SPG11-217ENST00000559511 HILS1P60008 231 aa8.09□□□□□ -1.11
SPG11-217ENST00000559511 ZNF418Q8TF45 676 aaPredicted RBP8.09□□□□□ -1.11
SPG11-217ENST00000559511 HIVEP2P31629 2446 aa8.09□□□□□ -1.11
SPG11-217ENST00000559511 K7EP13 123 aa8.09□□□□□ -1.11
SPG11-217ENST00000559511 RIPPLY3P57055 190 aa8.09□□□□□ -1.11
SPG11-217ENST00000559511 AMMECR1LQ6DCA0 310 aa8.09□□□□□ -1.11
SPG11-217ENST00000559511 CITED2Q99967 270 aaPredicted RBP8.09□□□□□ -1.11
SPG11-217ENST00000559511 FHL3Q13643 280 aa8.08□□□□□ -1.12
SPG11-217ENST00000559511 TRPT1Q86TN4 253 aaKnown RBP8.08□□□□□ -1.12
SPG11-217ENST00000559511 H3BRM9 83 aa8.08□□□□□ -1.12
SPG11-217ENST00000559511 GCSHP23434 173 aa8.08□□□□□ -1.12
SPG11-217ENST00000559511 FXYD2P54710 66 aa8.08□□□□□ -1.12
SPG11-217ENST00000559511 OTOGQ6ZRI0 2925 aa8.07□□□□□ -1.12
SPG11-217ENST00000559511 IGLV4-69A0A075B6H9 119 aa8.07□□□□□ -1.12
SPG11-217ENST00000559511 IGHV3-73A0A0B4J1V6 119 aa8.07□□□□□ -1.12
SPG11-217ENST00000559511 CCL24O00175 119 aa8.07□□□□□ -1.12
SPG11-217ENST00000559511 PROK1P58294 105 aa8.07□□□□□ -1.12
SPG11-217ENST00000559511 JMJD8Q96S16 334 aa8.07□□□□□ -1.12
SPG11-217ENST00000559511 SPAG8Q99932 426 aaPredicted RBP8.07□□□□□ -1.12
SPG11-217ENST00000559511 C9orf118A6NHY6 69 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 P0DMU3 169 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 FAM231AP0DMU4 169 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 FAM231CP0DMU5 169 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 EMP1P54849 157 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 ODF3L2Q3SX64 289 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 OR4C5Q8NGB2 326 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 TIMM17AQ99595 171 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 NAA38Q9BRA0 125 aaKnown RBP8.06□□□□□ -1.12
SPG11-217ENST00000559511 TSSC4Q9Y5U2 329 aaPredicted RBP8.06□□□□□ -1.12
SPG11-217ENST00000559511 LINC01549A6NIU2 74 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 C11orf86A6NJI1 115 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 OR11H12B2RN74 326 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 PMVKQ15126 192 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 NSUN5P1Q3KNT7 163 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 OR11H2Q8NH07 326 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 RAB37Q96AX2 223 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 TMEM141Q96I45 108 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 CST9LQ9H4G1 147 aa8.06□□□□□ -1.12
SPG11-217ENST00000559511 E9PLD3 99 aa8.05□□□□□ -1.12
SPG11-217ENST00000559511 M0R2P5 195 aa8.05□□□□□ -1.12
SPG11-217ENST00000559511 UFSP1Q6NVU6 142 aa8.05□□□□□ -1.12
SPG11-217ENST00000559511 CEND1Q8N111 149 aa8.05□□□□□ -1.12
SPG11-217ENST00000559511 C11orf72Q8NBR9 251 aa8.05□□□□□ -1.12
SPG11-217ENST00000559511 LINC01587Q99440 93 aa8.05□□□□□ -1.12
SPG11-217ENST00000559511 PRADC1Q9BSG0 188 aa8.05□□□□□ -1.12
SPG11-217ENST00000559511 NOTCH2Q04721 2471 aa8.05□□□□□ -1.12
SPG11-217ENST00000559511 MYMXA0A1B0GTQ4 84 aa8.05□□□□□ -1.12
SPG11-217ENST00000559511 H3BUT2 72 aa8.05□□□□□ -1.12
SPG11-217ENST00000559511 I3L3M4 83 aa8.05□□□□□ -1.12
SPG11-217ENST00000559511 NDUFA7O95182 113 aa8.05□□□□□ -1.12
SPG11-217ENST00000559511 ZNF415Q09FC8 603 aa8.05□□□□□ -1.12
SPG11-217ENST00000559511 RHOHQ15669 191 aa8.05□□□□□ -1.12
SPG11-217ENST00000559511 OPRPNQ99935 248 aaPredicted RBP8.05□□□□□ -1.12
SPG11-217ENST00000559511 TM2D2Q9BX73 214 aa8.05□□□□□ -1.12
SPG11-217ENST00000559511 K7ERJ3 54 aa8.04□□□□□ -1.12
SPG11-217ENST00000559511 INSP01308 110 aa8.04□□□□□ -1.12
SPG11-217ENST00000559511 EDA2RQ9HAV5 297 aa8.04□□□□□ -1.12
SPG11-217ENST00000559511 Q9UF83 564 aa8.04□□□□□ -1.12
SPG11-217ENST00000559511 TRAV25A0A0B4J276 109 aa8.03□□□□□ -1.12
SPG11-217ENST00000559511 CIDEAO60543 219 aa8.03□□□□□ -1.12
SPG11-217ENST00000559511 Q6ZSN1 163 aa8.03□□□□□ -1.12
SPG11-217ENST00000559511 C20orf203Q8NBC4 194 aa8.03□□□□□ -1.12
SPG11-217ENST00000559511 ADARB2-AS1A8MUL3 147 aa8.03□□□□□ -1.12
SPG11-217ENST00000559511 A8MWV9 139 aa8.03□□□□□ -1.12
SPG11-217ENST00000559511 CFAP126Q5VTH2 177 aa8.03□□□□□ -1.12
SPG11-217ENST00000559511 ZNRF2Q8NHG8 242 aa8.03□□□□□ -1.12
SPG11-217ENST00000559511 LINC00467Q9BRT7 94 aa8.03□□□□□ -1.12
SPG11-217ENST00000559511 XCL2Q9UBD3 114 aa8.03□□□□□ -1.12
SPG11-217ENST00000559511 SMIM13P0DJ93 91 aa8.02□□□□□ -1.13
SPG11-217ENST00000559511 PHLDA1Q8WV24 401 aaPredicted RBP8.02□□□□□ -1.13
SPG11-217ENST00000559511 CLUHP3Q96NS8 147 aa8.02□□□□□ -1.13
SPG11-217ENST00000559511 MRPL16Q9NX20 251 aaKnown RBP8.02□□□□□ -1.13
SPG11-217ENST00000559511 TRBV7-3A0A075B6L6 115 aa8.02□□□□□ -1.13
SPG11-217ENST00000559511 AZU1P20160 251 aa8.02□□□□□ -1.13
SPG11-217ENST00000559511 TAL2Q16559 108 aa8.02□□□□□ -1.13
SPG11-217ENST00000559511 PAPPA-AS1Q5QFB9 102 aa8.02□□□□□ -1.13
SPG11-217ENST00000559511 PIK3CD-AS1Q5SR53 167 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms