RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 IGKV2-29A2NJV5 120 aaPredicted RBP5.44□□□□□ -1.54
USP3-210ENST00000559192 DAND5Q8N907 189 aa5.44□□□□□ -1.54
USP3-210ENST00000559192 A0A0J9YXV3 536 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 SDIM1Q6ZPB5 146 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 PIP4P1Q86T03 277 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 TMEM61Q8N0U2 210 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 COX7B2Q8TF08 81 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 ADAMTS20P59510 1910 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 FSTL3O95633 263 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 LINC00694P0DN24 101 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 ZFP36P26651 326 aaKnown RBP5.43□□□□□ -1.54
USP3-210ENST00000559192 PIP4P2Q8N4L2 257 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 UPK3BQ9BT76 320 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 IGHV1-69DA0A0B4J2H0 117 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 LINC01548A6NM66 108 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 JMJD7-PLA2G4BH0Y9G9 81 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 IGHV1-69P01742 117 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 DEFB131AP59861 70 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 Q6ZQT7 251 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 NEXN-AS1Q8NBZ9 246 aa5.43□□□□□ -1.54
USP3-210ENST00000559192 A0A096LNJ9 63 aa5.42□□□□□ -1.54
USP3-210ENST00000559192 ELANEP08246 267 aa5.42□□□□□ -1.54
USP3-210ENST00000559192 CCDC140Q96MF4 163 aa5.42□□□□□ -1.54
USP3-210ENST00000559192 LAMA3Q16787 3333 aa5.42□□□□□ -1.54
USP3-210ENST00000559192 PRR14LQ5THK1 2151 aa5.42□□□□□ -1.54
USP3-210ENST00000559192 UNQ9165/PRO28630Q6UXU0 137 aa5.42□□□□□ -1.54
USP3-210ENST00000559192 IGHV4-4A0A075B6R2 117 aa5.41□□□□□ -1.54
USP3-210ENST00000559192 TEX49A0A1B0GTD5 131 aa5.41□□□□□ -1.54
USP3-210ENST00000559192 RHOHQ15669 191 aa5.41□□□□□ -1.54
USP3-210ENST00000559192 RAI1Q7Z5J4 1906 aaPredicted RBP5.41□□□□□ -1.54
USP3-210ENST00000559192 LECT2O14960 151 aa5.41□□□□□ -1.54
USP3-210ENST00000559192 ZNRF2Q8NHG8 242 aa5.41□□□□□ -1.54
USP3-210ENST00000559192 C11orf21Q9P2W6 132 aa5.41□□□□□ -1.54
USP3-210ENST00000559192 A6NED7 52 aa5.41□□□□□ -1.54
USP3-210ENST00000559192 SND1-IT1Q9HBX3 110 aa5.41□□□□□ -1.54
USP3-210ENST00000559192 SEC61GP60059 68 aa5.41□□□□□ -1.54
USP3-210ENST00000559192 CFHR3Q02985 330 aa5.41□□□□□ -1.54
USP3-210ENST00000559192 TNCP24821 2201 aa5.4□□□□□ -1.54
USP3-210ENST00000559192 TET2Q6N021 2002 aaPredicted RBP5.4□□□□□ -1.54
USP3-210ENST00000559192 NRACQ8N912 160 aa5.4□□□□□ -1.54
USP3-210ENST00000559192 PIFOQ8TCI5 191 aa5.4□□□□□ -1.54
USP3-210ENST00000559192 HHLA3Q9XRX5 114 aa5.4□□□□□ -1.54
USP3-210ENST00000559192 LENEPQ9Y5L5 61 aa5.4□□□□□ -1.54
USP3-210ENST00000559192 SPTA1P02549 2419 aa5.4□□□□□ -1.54
USP3-210ENST00000559192 CEMP1Q6PRD7 247 aaPredicted RBP5.4□□□□□ -1.54
USP3-210ENST00000559192 C5orf56Q8N8D9 126 aa5.4□□□□□ -1.54
USP3-210ENST00000559192 MAPK1IP1LQ8NDC0 245 aa5.4□□□□□ -1.54
USP3-210ENST00000559192 LY6LH3BQJ8 138 aa5.4□□□□□ -1.55
USP3-210ENST00000559192 FAM110AQ9BQ89 295 aa5.4□□□□□ -1.55
USP3-210ENST00000559192 XCL2Q9UBD3 114 aa5.4□□□□□ -1.55
USP3-210ENST00000559192 MALRD1Q5VYJ5 2156 aa5.4□□□□□ -1.55
USP3-210ENST00000559192 DEFB130BP0DP73 79 aa5.4□□□□□ -1.55
USP3-210ENST00000559192 DEFB130AP0DP74 79 aa5.4□□□□□ -1.55
USP3-210ENST00000559192 GNLYP22749 145 aa5.4□□□□□ -1.55
USP3-210ENST00000559192 PMAIP1Q13794 54 aa5.4□□□□□ -1.55
USP3-210ENST00000559192 ATP5EP56381 51 aaPredicted RBP5.39□□□□□ -1.55
USP3-210ENST00000559192 PRR9Q5T870 116 aa5.39□□□□□ -1.55
USP3-210ENST00000559192 HIST2H2BCQ6DN03 193 aa5.39□□□□□ -1.55
USP3-210ENST00000559192 HIST2H2BDQ6DRA6 164 aa5.39□□□□□ -1.55
USP3-210ENST00000559192 SERP2Q8N6R1 65 aa5.39□□□□□ -1.55
USP3-210ENST00000559192 AJUBAQ96IF1 538 aa5.39□□□□□ -1.55
USP3-210ENST00000559192 ATRXP46100 2492 aa5.39□□□□□ -1.55
USP3-210ENST00000559192 ODF3BA8MYP8 253 aa5.39□□□□□ -1.55
USP3-210ENST00000559192 RPL35AP18077 110 aaKnown RBP5.39□□□□□ -1.55
USP3-210ENST00000559192 MDFICQ9P1T7 246 aa5.39□□□□□ -1.55
USP3-210ENST00000559192 PSCAO43653 123 aa5.39□□□□□ -1.55
USP3-210ENST00000559192 NDUFB1O75438 58 aa5.39□□□□□ -1.55
USP3-210ENST00000559192 COX6B1P14854 86 aa5.39□□□□□ -1.55
USP3-210ENST00000559192 MRPS12O15235 138 aaKnown RBP5.38□□□□□ -1.55
USP3-210ENST00000559192 XGP55808 180 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 BLCAPP62952 87 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 CFAP126Q5VTH2 177 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 Q9HAA7 133 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 DNAH14Q0VDD8 3507 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 TRBV7-3A0A075B6L6 115 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 K7ENP7 123 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 IGHV4-38-2P0DP08 117 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 ZFAND3Q9H8U3 227 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 SMIM26A0A096LP01 95 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 COX7CP15954 63 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 HIGD2BQ4VC39 106 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 NFE4Q86UQ8 179 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 TIMM17AQ99595 171 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 A0A0J9YY99 117 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 P0DMU3 169 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 FAM231AP0DMU4 169 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 FAM231CP0DMU5 169 aa5.38□□□□□ -1.55
USP3-210ENST00000559192 Q6ZS46 218 aa5.37□□□□□ -1.55
USP3-210ENST00000559192 LYRM9A8MSI8 78 aa5.37□□□□□ -1.55
USP3-210ENST00000559192 CMC4P56277 68 aaPredicted RBP5.37□□□□□ -1.55
USP3-210ENST00000559192 ENHOQ6UWT2 76 aa5.37□□□□□ -1.55
USP3-210ENST00000559192 PLXNB1O43157 2135 aa5.37□□□□□ -1.55
USP3-210ENST00000559192 NOTCH3Q9UM47 2321 aa5.37□□□□□ -1.55
USP3-210ENST00000559192 SIRPDQ9H106 197 aa5.37□□□□□ -1.55
USP3-210ENST00000559192 SNURFQ9Y675 71 aa5.37□□□□□ -1.55
USP3-210ENST00000559192 WNK2Q9Y3S1 2297 aa5.37□□□□□ -1.55
USP3-210ENST00000559192 NDUFC1O43677 76 aa5.37□□□□□ -1.55
USP3-210ENST00000559192 MSMBP08118 114 aa5.37□□□□□ -1.55
USP3-210ENST00000559192 MRGPRG-AS1Q2M3A8 158 aa5.37□□□□□ -1.55
USP3-210ENST00000559192 DEFB136Q30KP8 78 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms