RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 Q6ZRP5 223 aa4.58□□□□□ -1.68
HMG20A-207ENST00000559035 INO80EQ8NBZ0 244 aaPredicted RBP4.58□□□□□ -1.68
HMG20A-207ENST00000559035 WFDC1Q9HC57 220 aa4.58□□□□□ -1.68
HMG20A-207ENST00000559035 PHLDA3Q9Y5J5 127 aa4.58□□□□□ -1.68
HMG20A-207ENST00000559035 TRBV25-1A0A075B6N4 114 aa4.57□□□□□ -1.68
HMG20A-207ENST00000559035 GVQW2A0A096LPI5 108 aaPredicted RBP4.57□□□□□ -1.68
HMG20A-207ENST00000559035 A0A1B0GUV1 79 aa4.57□□□□□ -1.68
HMG20A-207ENST00000559035 A6NJY4 79 aa4.57□□□□□ -1.68
HMG20A-207ENST00000559035 H7C1H1 209 aa4.57□□□□□ -1.68
HMG20A-207ENST00000559035 H2AFB2P0C5Z0 115 aa4.57□□□□□ -1.68
HMG20A-207ENST00000559035 RPS10P46783 165 aaKnown RBP4.57□□□□□ -1.68
HMG20A-207ENST00000559035 SUMO1P63165 101 aaKnown RBP4.57□□□□□ -1.68
HMG20A-207ENST00000559035 ZNF56Q15929 161 aa4.57□□□□□ -1.68
HMG20A-207ENST00000559035 LYPD6BQ8NI32 183 aa4.57□□□□□ -1.68
HMG20A-207ENST00000559035 DPH3Q96FX2 82 aa4.57□□□□□ -1.68
HMG20A-207ENST00000559035 FAM231BA6NCW3 169 aa4.56□□□□□ -1.68
HMG20A-207ENST00000559035 PEX7O00628 323 aa4.56□□□□□ -1.68
HMG20A-207ENST00000559035 H2BFSP57053 126 aa4.56□□□□□ -1.68
HMG20A-207ENST00000559035 ZNF674Q2M3X9 581 aa4.56□□□□□ -1.68
HMG20A-207ENST00000559035 OR10AG1Q8NH19 301 aa4.56□□□□□ -1.68
HMG20A-207ENST00000559035 RAB24Q969Q5 203 aa4.56□□□□□ -1.68
HMG20A-207ENST00000559035 DERL1Q9BUN8 251 aa4.56□□□□□ -1.68
HMG20A-207ENST00000559035 SMIM3Q9BZL3 60 aa4.56□□□□□ -1.68
HMG20A-207ENST00000559035 PSORS1C2Q9UIG4 136 aa4.56□□□□□ -1.68
HMG20A-207ENST00000559035 IGHV1-24A0A0C4DH33 117 aa4.55□□□□□ -1.68
HMG20A-207ENST00000559035 A0A1W2PRE2 83 aa4.55□□□□□ -1.68
HMG20A-207ENST00000559035 SNAI2O43623 268 aa4.55□□□□□ -1.68
HMG20A-207ENST00000559035 CXCL1P09341 107 aa4.55□□□□□ -1.68
HMG20A-207ENST00000559035 HIGD2BQ4VC39 106 aa4.55□□□□□ -1.68
HMG20A-207ENST00000559035 FAM162BQ5T6X4 162 aa4.55□□□□□ -1.68
HMG20A-207ENST00000559035 ZNF664Q8N3J9 261 aa4.55□□□□□ -1.68
HMG20A-207ENST00000559035 SCGB1C1Q8TD33 95 aa4.55□□□□□ -1.68
HMG20A-207ENST00000559035 PPP1R1CQ8WVI7 109 aa4.55□□□□□ -1.68
HMG20A-207ENST00000559035 TMEM167BQ9NRX6 74 aa4.55□□□□□ -1.68
HMG20A-207ENST00000559035 LINC00474Q9P2X8 69 aa4.55□□□□□ -1.68
HMG20A-207ENST00000559035 TMSB15BA0A087X1C1 80 aa4.54□□□□□ -1.68
HMG20A-207ENST00000559035 MPC2O95563 127 aa4.54□□□□□ -1.68
HMG20A-207ENST00000559035 RPL12P30050 165 aaKnown RBP4.54□□□□□ -1.68
HMG20A-207ENST00000559035 PRR26Q8N8Z3 221 aa4.54□□□□□ -1.68
HMG20A-207ENST00000559035 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.54□□□□□ -1.68
HMG20A-207ENST00000559035 AQP10Q96PS8 301 aa4.54□□□□□ -1.68
HMG20A-207ENST00000559035 SSBP4Q9BWG4 385 aaPredicted RBP4.54□□□□□ -1.68
HMG20A-207ENST00000559035 MED28Q9H204 178 aa4.54□□□□□ -1.68
HMG20A-207ENST00000559035 ZFP30Q9Y2G7 519 aa4.54□□□□□ -1.68
HMG20A-207ENST00000559035 GAGE12HA6NDE8 117 aa4.53□□□□□ -1.68
HMG20A-207ENST00000559035 CXorf1O96002 111 aa4.53□□□□□ -1.68
HMG20A-207ENST00000559035 LTAP01374 205 aa4.53□□□□□ -1.68
HMG20A-207ENST00000559035 KRTAP1-4P0C5Y4 121 aa4.53□□□□□ -1.68
HMG20A-207ENST00000559035 RAB5CP51148 216 aa4.53□□□□□ -1.68
HMG20A-207ENST00000559035 CYCSP99999 105 aaKnown RBP4.53□□□□□ -1.68
HMG20A-207ENST00000559035 ZNF726P1Q15940 193 aa4.53□□□□□ -1.68
HMG20A-207ENST00000559035 HIST1H2BAQ96A08 127 aa4.53□□□□□ -1.68
HMG20A-207ENST00000559035 PGLYRP4Q96LB8 373 aa4.53□□□□□ -1.68
HMG20A-207ENST00000559035 PSMG3Q9BT73 122 aaPredicted RBP4.53□□□□□ -1.68
HMG20A-207ENST00000559035 ZNF471Q9BX82 626 aaPredicted RBP4.53□□□□□ -1.68
HMG20A-207ENST00000559035 TRAV26-2A0A0B4J265 109 aa4.52□□□□□ -1.69
HMG20A-207ENST00000559035 FAM74A7A6NL05 159 aa4.52□□□□□ -1.69
HMG20A-207ENST00000559035 M0QY20 66 aa4.52□□□□□ -1.69
HMG20A-207ENST00000559035 IFNA7P01567 189 aa4.52□□□□□ -1.69
HMG20A-207ENST00000559035 OR5AL1P0C617 328 aa4.52□□□□□ -1.69
HMG20A-207ENST00000559035 PET100P0DJ07 73 aa4.52□□□□□ -1.69
HMG20A-207ENST00000559035 CFAP161Q6P656 301 aa4.52□□□□□ -1.69
HMG20A-207ENST00000559035 FMC1Q96HJ9 113 aa4.52□□□□□ -1.69
HMG20A-207ENST00000559035 TMEM243Q9BU79 118 aa4.52□□□□□ -1.69
HMG20A-207ENST00000559035 CCDC160A6NGH7 325 aa4.51□□□□□ -1.69
HMG20A-207ENST00000559035 ATP6V0CP27449 155 aa4.51□□□□□ -1.69
HMG20A-207ENST00000559035 PTTG1IPP53801 180 aa4.51□□□□□ -1.69
HMG20A-207ENST00000559035 CACNG7P62955 275 aa4.51□□□□□ -1.69
HMG20A-207ENST00000559035 FOXI1Q12951 378 aa4.51□□□□□ -1.69
HMG20A-207ENST00000559035 AP1S3Q96PC3 154 aa4.51□□□□□ -1.69
HMG20A-207ENST00000559035 CCDC32Q9BV29 185 aa4.51□□□□□ -1.69
HMG20A-207ENST00000559035 PKIGQ9Y2B9 76 aa4.51□□□□□ -1.69
HMG20A-207ENST00000559035 IGLV1-50A0A075B6I6 118 aa4.5□□□□□ -1.69
HMG20A-207ENST00000559035 FAM240BA0A1B0GVZ2 78 aa4.5□□□□□ -1.69
HMG20A-207ENST00000559035 A0A1W2PNN7 141 aa4.5□□□□□ -1.69
HMG20A-207ENST00000559035 MBP02144 154 aa4.5□□□□□ -1.69
HMG20A-207ENST00000559035 SULT1A2P50226 295 aa4.5□□□□□ -1.69
HMG20A-207ENST00000559035 UBE2G2P60604 165 aa4.5□□□□□ -1.69
HMG20A-207ENST00000559035 SERF2P84101 59 aa4.5□□□□□ -1.69
HMG20A-207ENST00000559035 PRR4Q16378 134 aa4.5□□□□□ -1.69
HMG20A-207ENST00000559035 SUMO4Q6EEV6 95 aa4.5□□□□□ -1.69
HMG20A-207ENST00000559035 CHCHD10Q8WYQ3 142 aaPredicted RBP4.5□□□□□ -1.69
HMG20A-207ENST00000559035 CARD19Q96LW7 228 aa4.5□□□□□ -1.69
HMG20A-207ENST00000559035 MUC21A0A140T8X8 626 aa4.49□□□□□ -1.69
HMG20A-207ENST00000559035 F5H697 171 aa4.49□□□□□ -1.69
HMG20A-207ENST00000559035 H0Y9J4 135 aa4.49□□□□□ -1.69
HMG20A-207ENST00000559035 TCEAL7Q9BRU2 100 aa4.49□□□□□ -1.69
HMG20A-207ENST00000559035 MLST8Q9BVC4 326 aa4.49□□□□□ -1.69
HMG20A-207ENST00000559035 NKX6-2Q9C056 277 aaPredicted RBP4.49□□□□□ -1.69
HMG20A-207ENST00000559035 ACTR3CQ9C0K3 210 aaPredicted RBP4.49□□□□□ -1.69
HMG20A-207ENST00000559035 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
HMG20A-207ENST00000559035 TNFSF18Q9UNG2 199 aa4.49□□□□□ -1.69
HMG20A-207ENST00000559035 CTXND1A0A1B0GTU2 59 aa4.48□□□□□ -1.69
HMG20A-207ENST00000559035 IGLV7-43P04211 117 aa4.48□□□□□ -1.69
HMG20A-207ENST00000559035 AMTP48728 403 aa4.48□□□□□ -1.69
HMG20A-207ENST00000559035 NKX2-5P52952 324 aaPredicted RBP4.48□□□□□ -1.69
HMG20A-207ENST00000559035 UBE2G1P62253 170 aa4.48□□□□□ -1.69
HMG20A-207ENST00000559035 SPANXN1Q5VSR9 72 aa4.48□□□□□ -1.69
HMG20A-207ENST00000559035 FER1L6-AS1Q8NA97 138 aa4.48□□□□□ -1.69
HMG20A-207ENST00000559035 DIRC1Q969H9 104 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms