RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 NACAE9PAV3 2078 aa5.03□□□□□ -1.6
TRAF3-206ENST00000558880 DNAH10Q8IVF4 4471 aa5.03□□□□□ -1.6
TRAF3-206ENST00000558880 A0A087WWL8 130 aa5.03□□□□□ -1.6
TRAF3-206ENST00000558880 IGHV3-73A0A0B4J1V6 119 aa5.03□□□□□ -1.6
TRAF3-206ENST00000558880 LOC100131303A0A0U1RQF7 123 aa5.03□□□□□ -1.6
TRAF3-206ENST00000558880 GATA1P15976 413 aaPredicted RBP5.03□□□□□ -1.6
TRAF3-206ENST00000558880 SSTP61278 116 aa5.03□□□□□ -1.6
TRAF3-206ENST00000558880 DAD1P61803 113 aa5.03□□□□□ -1.6
TRAF3-206ENST00000558880 CACNG7P62955 275 aa5.03□□□□□ -1.6
TRAF3-206ENST00000558880 ELOBQ15370 118 aa5.03□□□□□ -1.6
TRAF3-206ENST00000558880 CBLN2Q8IUK8 224 aa5.03□□□□□ -1.6
TRAF3-206ENST00000558880 ZFP82Q8N141 532 aa5.03□□□□□ -1.6
TRAF3-206ENST00000558880 C14orf178Q8N769 122 aaPredicted RBP5.03□□□□□ -1.6
TRAF3-206ENST00000558880 TPPP3Q9BW30 176 aa5.03□□□□□ -1.6
TRAF3-206ENST00000558880 RPS10P5Q9NQ39 176 aa5.03□□□□□ -1.6
TRAF3-206ENST00000558880 PHLDA3Q9Y5J5 127 aa5.03□□□□□ -1.6
TRAF3-206ENST00000558880 DNAH17Q9UFH2 4485 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 TGIF2-C20orf24A0A0A6YYL0 155 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 A0A1B0GUT8 65 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 TEX48A0A1B0GUV7 120 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 XKRY2A2RUG3 117 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 A8MWV9 139 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 SNAPINO95295 136 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 LY6G6CO95867 125 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 P0DMU3 169 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 FAM231AP0DMU4 169 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 FAM231CP0DMU5 169 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 CRYBA4P53673 196 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 SPANXN1Q5VSR9 72 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 MRPL54Q6P161 138 aaKnown RBP5.02□□□□□ -1.61
TRAF3-206ENST00000558880 TMEM88Q6PEY1 159 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 ZFP2Q6ZN57 461 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 SLC25A29Q8N8R3 303 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 PHLDA1Q8WV24 401 aaPredicted RBP5.02□□□□□ -1.61
TRAF3-206ENST00000558880 TMEM191AQ9H0A3 160 aa5.02□□□□□ -1.61
TRAF3-206ENST00000558880 TRBV24-1A0A075B6N3 115 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 TRGV2A0A075B6R0 118 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 DEFB131BA0A096LNP1 70 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 TRAV10A0A0B4J240 114 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 M0QY20 66 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 PHOX2AO14813 284 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 ATP5G1P05496 136 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 RAB4AP20338 218 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 TWIST1Q15672 202 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 SUMO4Q6EEV6 95 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 CEMP1Q6PRD7 247 aaPredicted RBP5.01□□□□□ -1.61
TRAF3-206ENST00000558880 TMEM136Q6ZRR5 245 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 AMN1Q8IY45 258 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 OR4C5Q8NGB2 326 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 NTN5Q8WTR8 489 aaPredicted RBP5.01□□□□□ -1.61
TRAF3-206ENST00000558880 APLNQ9ULZ1 77 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 URGCP-MRPS24S4R325 110 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 FRAS1Q86XX4 4008 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 FAT2Q9NYQ8 4349 aa5.01□□□□□ -1.61
TRAF3-206ENST00000558880 TRAV26-1A0A087WT03 109 aa5□□□□□ -1.61
TRAF3-206ENST00000558880 A0A096LPF7 62 aa5□□□□□ -1.61
TRAF3-206ENST00000558880 TRAV26-2A0A0B4J265 109 aa5□□□□□ -1.61
TRAF3-206ENST00000558880 TRBV6-4A0A1B0GX49 114 aa5□□□□□ -1.61
TRAF3-206ENST00000558880 COLCA2A8K830 154 aa5□□□□□ -1.61
TRAF3-206ENST00000558880 TRIAP1O43715 76 aa5□□□□□ -1.61
TRAF3-206ENST00000558880 RPS10P46783 165 aaKnown RBP5□□□□□ -1.61
TRAF3-206ENST00000558880 CAMPP49913 170 aa5□□□□□ -1.61
TRAF3-206ENST00000558880 FAM104BQ5XKR9 115 aa5□□□□□ -1.61
TRAF3-206ENST00000558880 ATP5L2Q7Z4Y8 100 aa5□□□□□ -1.61
TRAF3-206ENST00000558880 NRACQ8N912 160 aa5□□□□□ -1.61
TRAF3-206ENST00000558880 AP1S3Q96PC3 154 aa5□□□□□ -1.61
TRAF3-206ENST00000558880 HHLA3Q9XRX5 114 aa5□□□□□ -1.61
TRAF3-206ENST00000558880 DNAH11Q96DT5 4516 aa5□□□□□ -1.61
TRAF3-206ENST00000558880 TRAV9-1A0A075B6T8 112 aa4.99□□□□□ -1.61
TRAF3-206ENST00000558880 A0A0J9YY99 117 aa4.99□□□□□ -1.61
TRAF3-206ENST00000558880 F5H768 121 aa4.99□□□□□ -1.61
TRAF3-206ENST00000558880 SMKR1H3BMG3 65 aa4.99□□□□□ -1.61
TRAF3-206ENST00000558880 H3BNG1 76 aa4.99□□□□□ -1.61
TRAF3-206ENST00000558880 K7EQD1 137 aa4.99□□□□□ -1.61
TRAF3-206ENST00000558880 HTN3P15516 51 aa4.99□□□□□ -1.61
TRAF3-206ENST00000558880 HBBP68871 147 aa4.99□□□□□ -1.61
TRAF3-206ENST00000558880 SLAQ13239 276 aa4.99□□□□□ -1.61
TRAF3-206ENST00000558880 RIGQ13278 110 aa4.99□□□□□ -1.61
TRAF3-206ENST00000558880 MRPL51Q4U2R6 128 aaKnown RBP4.99□□□□□ -1.61
TRAF3-206ENST00000558880 FAM74A4Q5TZK3 123 aa4.99□□□□□ -1.61
TRAF3-206ENST00000558880 NEXN-AS1Q8NBZ9 246 aa4.99□□□□□ -1.61
TRAF3-206ENST00000558880 BTF3L4Q96K17 158 aa4.99□□□□□ -1.61
TRAF3-206ENST00000558880 DPH3P1Q9H4G8 78 aa4.99□□□□□ -1.61
TRAF3-206ENST00000558880 PRO0255Q9UI72 69 aa4.99□□□□□ -1.61
TRAF3-206ENST00000558880 RHODO00212 210 aa4.98□□□□□ -1.61
TRAF3-206ENST00000558880 CIDEAO60543 219 aa4.98□□□□□ -1.61
TRAF3-206ENST00000558880 TRGC1P0CF51 173 aa4.98□□□□□ -1.61
TRAF3-206ENST00000558880 RAB4BP61018 213 aa4.98□□□□□ -1.61
TRAF3-206ENST00000558880 RASL11AQ6T310 242 aa4.98□□□□□ -1.61
TRAF3-206ENST00000558880 RPL39LQ96EH5 51 aaKnown RBP4.98□□□□□ -1.61
TRAF3-206ENST00000558880 COX11Q9Y6N1 276 aa4.98□□□□□ -1.61
TRAF3-206ENST00000558880 TRGV4A0A0C4DH28 118 aa4.97□□□□□ -1.61
TRAF3-206ENST00000558880 TRBV6-5A0A0K0K1A5 114 aa4.97□□□□□ -1.61
TRAF3-206ENST00000558880 A0A1B0GW15 77 aa4.97□□□□□ -1.61
TRAF3-206ENST00000558880 NCR2O95944 276 aa4.97□□□□□ -1.61
TRAF3-206ENST00000558880 S100A1P23297 94 aa4.97□□□□□ -1.61
TRAF3-206ENST00000558880 UBE2D3P61077 147 aa4.97□□□□□ -1.61
TRAF3-206ENST00000558880 UBE2D2P62837 147 aa4.97□□□□□ -1.61
TRAF3-206ENST00000558880 NTM-AS1Q6ZSK4 140 aa4.97□□□□□ -1.61
TRAF3-206ENST00000558880 GNB1LQ9BYB4 327 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms