RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 Q6ZSA8 131 aa11.21□□□□□ -0.61
LRRC28-210ENST00000558879 FER1L6-AS1Q8NA97 138 aa11.21□□□□□ -0.61
LRRC28-210ENST00000558879 OR2D3Q8NGH3 330 aa11.21□□□□□ -0.61
LRRC28-210ENST00000558879 DNAH8Q96JB1 4490 aa11.21□□□□□ -0.62
LRRC28-210ENST00000558879 HAMPP81172 84 aa11.2□□□□□ -0.62
LRRC28-210ENST00000558879 MPV17L2Q567V2 206 aa11.2□□□□□ -0.62
LRRC28-210ENST00000558879 C9orf62Q8N4C0 152 aa11.2□□□□□ -0.62
LRRC28-210ENST00000558879 FRZBQ92765 325 aa11.2□□□□□ -0.62
LRRC28-210ENST00000558879 FAM30AQ9NZY2 134 aa11.2□□□□□ -0.62
LRRC28-210ENST00000558879 FAT1Q14517 4588 aa11.2□□□□□ -0.62
LRRC28-210ENST00000558879 IGKV2D-24A0A075B6R9 120 aa11.19□□□□□ -0.62
LRRC28-210ENST00000558879 SMIM17P0DL12 118 aa11.19□□□□□ -0.62
LRRC28-210ENST00000558879 TAGLN2P37802 199 aaKnown RBP11.19□□□□□ -0.62
LRRC28-210ENST00000558879 NTM-AS1Q6ZSK4 140 aa11.19□□□□□ -0.62
LRRC28-210ENST00000558879 BAALCQ8WXS3 180 aa11.19□□□□□ -0.62
LRRC28-210ENST00000558879 UBE2WQ96B02 151 aa11.19□□□□□ -0.62
LRRC28-210ENST00000558879 DAZAP1Q96EP5 407 aaKnown RBP11.19□□□□□ -0.62
LRRC28-210ENST00000558879 MED9Q9NWA0 146 aa11.19□□□□□ -0.62
LRRC28-210ENST00000558879 F5H697 171 aa11.18□□□□□ -0.62
LRRC28-210ENST00000558879 P01737 135 aa11.18□□□□□ -0.62
LRRC28-210ENST00000558879 SSTP61278 116 aa11.18□□□□□ -0.62
LRRC28-210ENST00000558879 CACNG7P62955 275 aa11.18□□□□□ -0.62
LRRC28-210ENST00000558879 Q0VG73 95 aa11.18□□□□□ -0.62
LRRC28-210ENST00000558879 TMEM97Q5BJF2 176 aa11.18□□□□□ -0.62
LRRC28-210ENST00000558879 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.17□□□□□ -0.62
LRRC28-210ENST00000558879 XKRY2A2RUG3 117 aa11.17□□□□□ -0.62
LRRC28-210ENST00000558879 M0QY20 66 aa11.17□□□□□ -0.62
LRRC28-210ENST00000558879 CTRLP40313 264 aa11.17□□□□□ -0.62
LRRC28-210ENST00000558879 KCNIP4Q6PIL6 250 aa11.17□□□□□ -0.62
LRRC28-210ENST00000558879 ENHOQ6UWT2 76 aa11.17□□□□□ -0.62
LRRC28-210ENST00000558879 AKAP14Q86UN6 197 aa11.17□□□□□ -0.62
LRRC28-210ENST00000558879 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.17□□□□□ -0.62
LRRC28-210ENST00000558879 TPPP3Q9BW30 176 aa11.17□□□□□ -0.62
LRRC28-210ENST00000558879 BIN3Q9NQY0 253 aa11.17□□□□□ -0.62
LRRC28-210ENST00000558879 F2Z2F3 143 aa11.16□□□□□ -0.62
LRRC28-210ENST00000558879 SMR3BP02814 79 aaPredicted RBP11.16□□□□□ -0.62
LRRC28-210ENST00000558879 MGPP08493 103 aa11.16□□□□□ -0.62
LRRC28-210ENST00000558879 PKIAP61925 76 aa11.16□□□□□ -0.62
LRRC28-210ENST00000558879 SUMO4Q6EEV6 95 aa11.16□□□□□ -0.62
LRRC28-210ENST00000558879 CNFNQ9BYD5 112 aa11.16□□□□□ -0.62
LRRC28-210ENST00000558879 K7EN84 100 aa11.15□□□□□ -0.62
LRRC28-210ENST00000558879 IQCJQ1A5X6 159 aa11.15□□□□□ -0.62
LRRC28-210ENST00000558879 LYZL1Q6UWQ5 148 aa11.15□□□□□ -0.62
LRRC28-210ENST00000558879 C15orf54Q8N8G6 183 aa11.15□□□□□ -0.62
LRRC28-210ENST00000558879 Q8N976 141 aa11.15□□□□□ -0.62
LRRC28-210ENST00000558879 CHCHD5Q9BSY4 110 aa11.15□□□□□ -0.62
LRRC28-210ENST00000558879 TMEM262E9PQX1 116 aa11.14□□□□□ -0.63
LRRC28-210ENST00000558879 H7C1H1 209 aa11.14□□□□□ -0.63
LRRC28-210ENST00000558879 CRPP02741 224 aa11.14□□□□□ -0.63
LRRC28-210ENST00000558879 TRGC1P0CF51 173 aa11.14□□□□□ -0.63
LRRC28-210ENST00000558879 INAFM2P0DMQ5 153 aa11.14□□□□□ -0.63
LRRC28-210ENST00000558879 NUDT10Q8NFP7 164 aa11.14□□□□□ -0.63
LRRC28-210ENST00000558879 LYPD6BQ8NI32 183 aa11.14□□□□□ -0.63
LRRC28-210ENST00000558879 NUDT11Q96G61 164 aa11.14□□□□□ -0.63
LRRC28-210ENST00000558879 C1orf43Q9BWL3 253 aa11.14□□□□□ -0.63
LRRC28-210ENST00000558879 DPH3P1Q9H4G8 78 aa11.14□□□□□ -0.63
LRRC28-210ENST00000558879 PRR34Q9NV39 138 aa11.14□□□□□ -0.63
LRRC28-210ENST00000558879 TRBV25-1A0A075B6N4 114 aa11.13□□□□□ -0.63
LRRC28-210ENST00000558879 ANGP03950 147 aaKnown RBP11.13□□□□□ -0.63
LRRC28-210ENST00000558879 WDR73Q6P4I2 378 aa11.13□□□□□ -0.63
LRRC28-210ENST00000558879 ALKAL2Q6UX46 152 aa11.13□□□□□ -0.63
LRRC28-210ENST00000558879 FLG2Q5D862 2391 aaPredicted RBP11.13□□□□□ -0.63
LRRC28-210ENST00000558879 hCG_2014768A0A024R1R8 64 aa11.12□□□□□ -0.63
LRRC28-210ENST00000558879 TMEM250H0YL14 139 aa11.12□□□□□ -0.63
LRRC28-210ENST00000558879 NTF3P20783 257 aa11.12□□□□□ -0.63
LRRC28-210ENST00000558879 MIAQ16674 131 aa11.12□□□□□ -0.63
LRRC28-210ENST00000558879 RASL11AQ6T310 242 aa11.12□□□□□ -0.63
LRRC28-210ENST00000558879 RNASE7Q9H1E1 156 aaKnown RBP11.12□□□□□ -0.63
LRRC28-210ENST00000558879 RPP21Q9H633 154 aaKnown RBP11.12□□□□□ -0.63
LRRC28-210ENST00000558879 IGHV1-24A0A0C4DH33 117 aa11.11□□□□□ -0.63
LRRC28-210ENST00000558879 FAM229AH3BQW9 127 aa11.11□□□□□ -0.63
LRRC28-210ENST00000558879 RBX1P62877 108 aa11.11□□□□□ -0.63
LRRC28-210ENST00000558879 OCC1Q8TAD7 63 aa11.11□□□□□ -0.63
LRRC28-210ENST00000558879 PGLYRP4Q96LB8 373 aa11.11□□□□□ -0.63
LRRC28-210ENST00000558879 SRRM2Q9UQ35 2752 aaKnown RBP11.11□□□□□ -0.63
LRRC28-210ENST00000558879 NKX2-5P52952 324 aaPredicted RBP11.1□□□□□ -0.63
LRRC28-210ENST00000558879 BLOC1S1P78537 153 aa11.1□□□□□ -0.63
LRRC28-210ENST00000558879 GAGE6Q13070 117 aa11.1□□□□□ -0.63
LRRC28-210ENST00000558879 LINC01620Q4KN68 170 aa11.1□□□□□ -0.63
LRRC28-210ENST00000558879 KRTAP26-1Q6PEX3 210 aa11.1□□□□□ -0.63
LRRC28-210ENST00000558879 C14orf177Q52M58 125 aa11.09□□□□□ -0.63
LRRC28-210ENST00000558879 NIT2Q9NQR4 276 aa11.09□□□□□ -0.63
LRRC28-210ENST00000558879 MYCBP2O75592 4640 aa11.09□□□□□ -0.63
LRRC28-210ENST00000558879 DMBT1Q9UGM3 2413 aaPredicted RBP11.08□□□□□ -0.64
LRRC28-210ENST00000558879 FAM231DQ6ZW35 169 aa11.08□□□□□ -0.64
LRRC28-210ENST00000558879 GTSF1Q8WW33 167 aa11.08□□□□□ -0.64
LRRC28-210ENST00000558879 NDUFS6O75380 124 aaKnown RBP11.07□□□□□ -0.64
LRRC28-210ENST00000558879 HLA-DQA1P01909 254 aa11.07□□□□□ -0.64
LRRC28-210ENST00000558879 CLPSL2Q6UWE3 100 aa11.07□□□□□ -0.64
LRRC28-210ENST00000558879 SCXQ7RTU7 201 aa11.07□□□□□ -0.64
LRRC28-210ENST00000558879 LINC00269Q8N2A0 174 aa11.07□□□□□ -0.64
LRRC28-210ENST00000558879 C20orf203Q8NBC4 194 aa11.07□□□□□ -0.64
LRRC28-210ENST00000558879 A0A1B0GUV1 79 aa11.06□□□□□ -0.64
LRRC28-210ENST00000558879 USP17L23D6RBM5 183 aa11.06□□□□□ -0.64
LRRC28-210ENST00000558879 TWIST1Q15672 202 aa11.06□□□□□ -0.64
LRRC28-210ENST00000558879 TMEM243Q9BU79 118 aa11.06□□□□□ -0.64
LRRC28-210ENST00000558879 REG3AQ06141 175 aa11.05□□□□□ -0.64
LRRC28-210ENST00000558879 CT83Q5H943 113 aa11.05□□□□□ -0.64
LRRC28-210ENST00000558879 LINC00528Q8N1L1 170 aa11.05□□□□□ -0.64
LRRC28-210ENST00000558879 GATD1Q8NB37 220 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms