RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 TMEM218A2RU14 115 aa8.49□□□□□ -1.05
LRRC28-206ENST00000558471 H7C1H1 209 aa8.49□□□□□ -1.05
LRRC28-206ENST00000558471 ADCYAP1P18509 176 aa8.49□□□□□ -1.05
LRRC28-206ENST00000558471 PNRC1Q12796 327 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-206ENST00000558471 SMIM15Q7Z3B0 74 aa8.49□□□□□ -1.05
LRRC28-206ENST00000558471 A0A087WWC5 75 aa8.48□□□□□ -1.05
LRRC28-206ENST00000558471 IGHV3-38A0A0C4DH36 116 aa8.48□□□□□ -1.05
LRRC28-206ENST00000558471 LINC00862A6NCI5 91 aa8.48□□□□□ -1.05
LRRC28-206ENST00000558471 RIGQ13278 110 aa8.48□□□□□ -1.05
LRRC28-206ENST00000558471 RASL11AQ6T310 242 aa8.48□□□□□ -1.05
LRRC28-206ENST00000558471 C6orf223Q8N319 242 aa8.48□□□□□ -1.05
LRRC28-206ENST00000558471 DNAJC30Q96LL9 226 aa8.48□□□□□ -1.05
LRRC28-206ENST00000558471 TNFRSF18Q9Y5U5 241 aa8.48□□□□□ -1.05
LRRC28-206ENST00000558471 DNAH17Q9UFH2 4485 aa8.48□□□□□ -1.05
LRRC28-206ENST00000558471 TRAV9-2A0A087WT02 112 aa8.47□□□□□ -1.05
LRRC28-206ENST00000558471 TRAV26-2A0A0B4J265 109 aa8.47□□□□□ -1.05
LRRC28-206ENST00000558471 F8W036 122 aa8.47□□□□□ -1.05
LRRC28-206ENST00000558471 LINC01556Q5JQF7 62 aa8.47□□□□□ -1.05
LRRC28-206ENST00000558471 LINC00336Q6ZUF6 198 aa8.47□□□□□ -1.05
LRRC28-206ENST00000558471 GATD1Q8NB37 220 aa8.47□□□□□ -1.05
LRRC28-206ENST00000558471 TMEM191AQ9H0A3 160 aa8.47□□□□□ -1.05
LRRC28-206ENST00000558471 NIT2Q9NQR4 276 aa8.47□□□□□ -1.05
LRRC28-206ENST00000558471 FRAS1Q86XX4 4008 aa8.47□□□□□ -1.05
LRRC28-206ENST00000558471 PPP1R2P9O14990 202 aa8.46□□□□□ -1.06
LRRC28-206ENST00000558471 IGHV3-30P01768 117 aa8.46□□□□□ -1.06
LRRC28-206ENST00000558471 IGHV3-33P01772 117 aa8.46□□□□□ -1.06
LRRC28-206ENST00000558471 MT-ND4LP03901 98 aa8.46□□□□□ -1.06
LRRC28-206ENST00000558471 IGHV3-30-3P0DP02 117 aa8.46□□□□□ -1.06
LRRC28-206ENST00000558471 IGHV3-30-5P0DP03 117 aa8.46□□□□□ -1.06
LRRC28-206ENST00000558471 DAZ4Q86SG3 579 aaKnown RBP8.46□□□□□ -1.06
LRRC28-206ENST00000558471 DAZ3Q9NR90 486 aaKnown RBP8.46□□□□□ -1.06
LRRC28-206ENST00000558471 TRBV6-8A0A0A6YYG3 113 aa8.45□□□□□ -1.06
LRRC28-206ENST00000558471 PRSS29PA6NIE9 313 aa8.45□□□□□ -1.06
LRRC28-206ENST00000558471 K7EP13 123 aa8.45□□□□□ -1.06
LRRC28-206ENST00000558471 RAB4AP20338 218 aa8.45□□□□□ -1.06
LRRC28-206ENST00000558471 NTM-AS1Q6ZSK4 140 aa8.45□□□□□ -1.06
LRRC28-206ENST00000558471 AMN1Q8IY45 258 aa8.45□□□□□ -1.06
LRRC28-206ENST00000558471 Q8N3U1 123 aa8.45□□□□□ -1.06
LRRC28-206ENST00000558471 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-206ENST00000558471 ANAPC16Q96DE5 110 aa8.45□□□□□ -1.06
LRRC28-206ENST00000558471 RPL39LQ96EH5 51 aaKnown RBP8.45□□□□□ -1.06
LRRC28-206ENST00000558471 RNF185Q96GF1 192 aa8.45□□□□□ -1.06
LRRC28-206ENST00000558471 SEC11CQ9BY50 192 aa8.45□□□□□ -1.06
LRRC28-206ENST00000558471 FAT2Q9NYQ8 4349 aa8.44□□□□□ -1.06
LRRC28-206ENST00000558471 GAS8-AS1O95177 125 aa8.44□□□□□ -1.06
LRRC28-206ENST00000558471 BTF3P20290 206 aaKnown RBP8.44□□□□□ -1.06
LRRC28-206ENST00000558471 CAMPP49913 170 aa8.44□□□□□ -1.06
LRRC28-206ENST00000558471 NIT1Q86X76 327 aa8.44□□□□□ -1.06
LRRC28-206ENST00000558471 TMEM97Q5BJF2 176 aa8.43□□□□□ -1.06
LRRC28-206ENST00000558471 MRPL54Q6P161 138 aaKnown RBP8.43□□□□□ -1.06
LRRC28-206ENST00000558471 C10orf126Q8N4M7 172 aa8.43□□□□□ -1.06
LRRC28-206ENST00000558471 DEFB104AQ8WTQ1 72 aa8.43□□□□□ -1.06
LRRC28-206ENST00000558471 FRZBQ92765 325 aa8.43□□□□□ -1.06
LRRC28-206ENST00000558471 EPPK1P58107 5090 aaKnown RBP8.43□□□□□ -1.06
LRRC28-206ENST00000558471 A0A1B0GW15 77 aa8.42□□□□□ -1.06
LRRC28-206ENST00000558471 A0A1B0GXF2 115 aa8.42□□□□□ -1.06
LRRC28-206ENST00000558471 IBA57-AS1B1ANH7 110 aa8.42□□□□□ -1.06
LRRC28-206ENST00000558471 TNP2Q05952 138 aa8.42□□□□□ -1.06
LRRC28-206ENST00000558471 C10orf91Q5T1B1 145 aa8.42□□□□□ -1.06
LRRC28-206ENST00000558471 Q6ZRN7 208 aaPredicted RBP8.42□□□□□ -1.06
LRRC28-206ENST00000558471 RPS10P46783 165 aaKnown RBP8.41□□□□□ -1.06
LRRC28-206ENST00000558471 FAM104BQ5XKR9 115 aa8.41□□□□□ -1.06
LRRC28-206ENST00000558471 MRAP2Q96G30 205 aa8.41□□□□□ -1.06
LRRC28-206ENST00000558471 TRBV25-1A0A075B6N4 114 aa8.4□□□□□ -1.06
LRRC28-206ENST00000558471 TRBV6-5A0A0K0K1A5 114 aa8.4□□□□□ -1.06
LRRC28-206ENST00000558471 A0A1B0GVY2 172 aa8.4□□□□□ -1.06
LRRC28-206ENST00000558471 TMEM262E9PQX1 116 aa8.4□□□□□ -1.06
LRRC28-206ENST00000558471 SMKR1H3BMG3 65 aa8.4□□□□□ -1.06
LRRC28-206ENST00000558471 HBBP68871 147 aa8.4□□□□□ -1.06
LRRC28-206ENST00000558471 IQCJQ1A5X6 159 aa8.4□□□□□ -1.06
LRRC28-206ENST00000558471 MRPL51Q4U2R6 128 aaKnown RBP8.4□□□□□ -1.06
LRRC28-206ENST00000558471 KCNIP4Q6PIL6 250 aa8.4□□□□□ -1.06
LRRC28-206ENST00000558471 NFE4Q86UQ8 179 aa8.4□□□□□ -1.06
LRRC28-206ENST00000558471 CHCHD5Q9BSY4 110 aa8.4□□□□□ -1.06
LRRC28-206ENST00000558471 URGCP-MRPS24S4R325 110 aa8.4□□□□□ -1.06
LRRC28-206ENST00000558471 A0A087WX48 190 aa8.39□□□□□ -1.07
LRRC28-206ENST00000558471 IGHV1-24A0A0C4DH33 117 aa8.39□□□□□ -1.07
LRRC28-206ENST00000558471 SDHAF1A6NFY7 115 aa8.39□□□□□ -1.07
LRRC28-206ENST00000558471 NCR2O95944 276 aa8.39□□□□□ -1.07
LRRC28-206ENST00000558471 S100A8P05109 93 aa8.39□□□□□ -1.07
LRRC28-206ENST00000558471 ATP5L2Q7Z4Y8 100 aa8.39□□□□□ -1.07
LRRC28-206ENST00000558471 CHCHD7Q9BUK0 85 aa8.39□□□□□ -1.07
LRRC28-206ENST00000558471 CTDSP1Q9GZU7 261 aa8.39□□□□□ -1.07
LRRC28-206ENST00000558471 ST20Q9HBF5 79 aa8.39□□□□□ -1.07
LRRC28-206ENST00000558471 CARHSP1Q9Y2V2 147 aaKnown RBP8.39□□□□□ -1.07
LRRC28-206ENST00000558471 GAGE6Q13070 117 aa8.38□□□□□ -1.07
LRRC28-206ENST00000558471 COTL1Q14019 142 aa8.38□□□□□ -1.07
LRRC28-206ENST00000558471 MPV17L2Q567V2 206 aa8.38□□□□□ -1.07
LRRC28-206ENST00000558471 ATRAIDQ6UW56 229 aa8.38□□□□□ -1.07
LRRC28-206ENST00000558471 NRACQ8N912 160 aa8.38□□□□□ -1.07
LRRC28-206ENST00000558471 IMMP2LQ96T52 175 aa8.38□□□□□ -1.07
LRRC28-206ENST00000558471 Q9HAA7 133 aa8.38□□□□□ -1.07
LRRC28-206ENST00000558471 KLK12Q9UKR0 248 aa8.38□□□□□ -1.07
LRRC28-206ENST00000558471 PKD1P98161 4303 aa8.38□□□□□ -1.07
LRRC28-206ENST00000558471 C7orf77A4D0Y5 90 aa8.37□□□□□ -1.07
LRRC28-206ENST00000558471 PMCHP20382 165 aa8.37□□□□□ -1.07
LRRC28-206ENST00000558471 POLR2KP53803 58 aaKnown RBP8.37□□□□□ -1.07
LRRC28-206ENST00000558471 LAGE3Q14657 143 aa8.37□□□□□ -1.07
LRRC28-206ENST00000558471 Q8N976 141 aa8.37□□□□□ -1.07
LRRC28-206ENST00000558471 BTF3L4Q96K17 158 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms