RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 TEX29Q8N6K0 151 aa7.73□□□□□ -1.17
TPM1-210ENST00000558264 KIR2DL4Q99706 377 aa7.73□□□□□ -1.17
TPM1-210ENST00000558264 NAA38Q9BRA0 125 aaKnown RBP7.73□□□□□ -1.17
TPM1-210ENST00000558264 PRSS29PA6NIE9 313 aa7.72□□□□□ -1.17
TPM1-210ENST00000558264 MAPKAPK5-AS1Q8N8E1 139 aa7.72□□□□□ -1.17
TPM1-210ENST00000558264 NEXN-AS1Q8NBZ9 246 aa7.72□□□□□ -1.17
TPM1-210ENST00000558264 OPRPNQ99935 248 aaPredicted RBP7.72□□□□□ -1.17
TPM1-210ENST00000558264 MRPL16Q9NX20 251 aaKnown RBP7.72□□□□□ -1.17
TPM1-210ENST00000558264 F8VRH5 84 aa7.72□□□□□ -1.17
TPM1-210ENST00000558264 H7C1H1 209 aa7.72□□□□□ -1.17
TPM1-210ENST00000558264 PPP1R17O96001 155 aa7.72□□□□□ -1.17
TPM1-210ENST00000558264 TSHBP01222 138 aa7.72□□□□□ -1.17
TPM1-210ENST00000558264 FHL3Q13643 280 aa7.72□□□□□ -1.17
TPM1-210ENST00000558264 CYSLTR1Q9Y271 337 aa7.72□□□□□ -1.17
TPM1-210ENST00000558264 VCYO14598 125 aa7.71□□□□□ -1.17
TPM1-210ENST00000558264 SAP30O75446 220 aa7.71□□□□□ -1.17
TPM1-210ENST00000558264 RNASE1P07998 156 aaKnown RBP7.71□□□□□ -1.17
TPM1-210ENST00000558264 AZU1P20160 251 aa7.71□□□□□ -1.17
TPM1-210ENST00000558264 SPAG8Q99932 426 aaPredicted RBP7.71□□□□□ -1.17
TPM1-210ENST00000558264 CBY1Q9Y3M2 126 aa7.71□□□□□ -1.18
TPM1-210ENST00000558264 TSSC4Q9Y5U2 329 aaPredicted RBP7.71□□□□□ -1.18
TPM1-210ENST00000558264 Q6ZSN1 163 aa7.7□□□□□ -1.18
TPM1-210ENST00000558264 STHQ8IWL8 128 aa7.7□□□□□ -1.18
TPM1-210ENST00000558264 PLNP26678 52 aa7.7□□□□□ -1.18
TPM1-210ENST00000558264 VAMP3Q15836 100 aa7.7□□□□□ -1.18
TPM1-210ENST00000558264 RAB37Q96AX2 223 aa7.7□□□□□ -1.18
TPM1-210ENST00000558264 NACAE9PAV3 2078 aa7.69□□□□□ -1.18
TPM1-210ENST00000558264 OTOGQ6ZRI0 2925 aa7.69□□□□□ -1.18
TPM1-210ENST00000558264 TRBV25-1A0A075B6N4 114 aa7.69□□□□□ -1.18
TPM1-210ENST00000558264 TMEM238LA0A1B0GVL6 79 aa7.69□□□□□ -1.18
TPM1-210ENST00000558264 CCL25O15444 150 aa7.69□□□□□ -1.18
TPM1-210ENST00000558264 GCSHP23434 173 aa7.69□□□□□ -1.18
TPM1-210ENST00000558264 TRPT1Q86TN4 253 aaKnown RBP7.69□□□□□ -1.18
TPM1-210ENST00000558264 ZNF418Q8TF45 676 aaPredicted RBP7.69□□□□□ -1.18
TPM1-210ENST00000558264 TRAV2A0A0B4J234 112 aa7.69□□□□□ -1.18
TPM1-210ENST00000558264 TRAV12-1A0A0B4J245 112 aa7.69□□□□□ -1.18
TPM1-210ENST00000558264 TRBV27A0A0K0K1C4 114 aa7.69□□□□□ -1.18
TPM1-210ENST00000558264 A8MTW9 85 aa7.69□□□□□ -1.18
TPM1-210ENST00000558264 OR11H12B2RN74 326 aa7.69□□□□□ -1.18
TPM1-210ENST00000558264 INSP01308 110 aa7.69□□□□□ -1.18
TPM1-210ENST00000558264 ORAOV1Q8WV07 137 aa7.69□□□□□ -1.18
TPM1-210ENST00000558264 CHAC1Q9BUX1 264 aa7.69□□□□□ -1.18
TPM1-210ENST00000558264 IGIPA6NJ69 53 aa7.68□□□□□ -1.18
TPM1-210ENST00000558264 PTTG1IPP53801 180 aa7.68□□□□□ -1.18
TPM1-210ENST00000558264 ZNF415Q09FC8 603 aa7.68□□□□□ -1.18
TPM1-210ENST00000558264 HSD52Q0P140 79 aa7.68□□□□□ -1.18
TPM1-210ENST00000558264 TRBV6-5A0A0K0K1A5 114 aa7.68□□□□□ -1.18
TPM1-210ENST00000558264 M0R2P5 195 aa7.68□□□□□ -1.18
TPM1-210ENST00000558264 LY6G6DO95868 133 aa7.68□□□□□ -1.18
TPM1-210ENST00000558264 HILS1P60008 231 aa7.68□□□□□ -1.18
TPM1-210ENST00000558264 GAGE1Q13065 139 aa7.68□□□□□ -1.18
TPM1-210ENST00000558264 C11orf72Q8NBR9 251 aa7.68□□□□□ -1.18
TPM1-210ENST00000558264 JMJD8Q96S16 334 aa7.68□□□□□ -1.18
TPM1-210ENST00000558264 IGHV3-38A0A0C4DH36 116 aa7.67□□□□□ -1.18
TPM1-210ENST00000558264 C11orf86A6NJI1 115 aa7.67□□□□□ -1.18
TPM1-210ENST00000558264 FXYD2P54710 66 aa7.67□□□□□ -1.18
TPM1-210ENST00000558264 C1orf158Q8N1D5 194 aa7.67□□□□□ -1.18
TPM1-210ENST00000558264 FN1P02751 2386 aaKnown RBP7.67□□□□□ -1.18
TPM1-210ENST00000558264 K7ERJ3 54 aa7.67□□□□□ -1.18
TPM1-210ENST00000558264 RPL35AP18077 110 aaKnown RBP7.67□□□□□ -1.18
TPM1-210ENST00000558264 RNASE13Q5GAN3 156 aaKnown RBP7.67□□□□□ -1.18
TPM1-210ENST00000558264 AMMECR1LQ6DCA0 310 aa7.67□□□□□ -1.18
TPM1-210ENST00000558264 CEMP1Q6PRD7 247 aaPredicted RBP7.67□□□□□ -1.18
TPM1-210ENST00000558264 IGLV4-69A0A075B6H9 119 aa7.66□□□□□ -1.18
TPM1-210ENST00000558264 ADARB2-AS1A8MUL3 147 aa7.66□□□□□ -1.18
TPM1-210ENST00000558264 KRTAP10-3P60369 221 aa7.66□□□□□ -1.18
TPM1-210ENST00000558264 RPL32P62910 135 aaKnown RBP7.66□□□□□ -1.18
TPM1-210ENST00000558264 CFAP126Q5VTH2 177 aa7.66□□□□□ -1.18
TPM1-210ENST00000558264 PHLDA1Q8WV24 401 aaPredicted RBP7.66□□□□□ -1.18
TPM1-210ENST00000558264 C16orf95Q9H693 158 aa7.66□□□□□ -1.18
TPM1-210ENST00000558264 IGHV3-53P01767 116 aa7.66□□□□□ -1.18
TPM1-210ENST00000558264 OR11H2Q8NH07 326 aa7.66□□□□□ -1.18
TPM1-210ENST00000558264 PRADC1Q9BSG0 188 aa7.66□□□□□ -1.18
TPM1-210ENST00000558264 I3L3M4 83 aa7.65□□□□□ -1.18
TPM1-210ENST00000558264 SIVA1O15304 175 aa7.65□□□□□ -1.18
TPM1-210ENST00000558264 RIPPLY3P57055 190 aa7.65□□□□□ -1.18
TPM1-210ENST00000558264 CST9LQ9H4G1 147 aa7.65□□□□□ -1.18
TPM1-210ENST00000558264 TRGV1A0A0A0MS02 117 aa7.65□□□□□ -1.18
TPM1-210ENST00000558264 INAFM1C9JVW0 142 aa7.65□□□□□ -1.18
TPM1-210ENST00000558264 SEC11AP67812 179 aa7.65□□□□□ -1.18
TPM1-210ENST00000558264 UBE2V1Q13404 147 aa7.65□□□□□ -1.18
TPM1-210ENST00000558264 PMVKQ15126 192 aa7.65□□□□□ -1.18
TPM1-210ENST00000558264 TMEM170BQ5T4T1 132 aa7.65□□□□□ -1.18
TPM1-210ENST00000558264 TNFRSF18Q9Y5U5 241 aa7.65□□□□□ -1.18
TPM1-210ENST00000558264 C2CD3Q4AC94 2353 aa7.65□□□□□ -1.19
TPM1-210ENST00000558264 IGHV3-64A0A075B6Q5 118 aa7.65□□□□□ -1.19
TPM1-210ENST00000558264 H3BUT2 72 aa7.65□□□□□ -1.19
TPM1-210ENST00000558264 UFSP1Q6NVU6 142 aa7.65□□□□□ -1.19
TPM1-210ENST00000558264 ZNRF2Q8NHG8 242 aa7.65□□□□□ -1.19
TPM1-210ENST00000558264 TRAV25A0A0B4J276 109 aa7.64□□□□□ -1.19
TPM1-210ENST00000558264 A8MWV9 139 aa7.64□□□□□ -1.19
TPM1-210ENST00000558264 C20orf203Q8NBC4 194 aa7.64□□□□□ -1.19
TPM1-210ENST00000558264 A6NDN8 102 aa7.64□□□□□ -1.19
TPM1-210ENST00000558264 VWFP04275 2813 aa7.63□□□□□ -1.19
TPM1-210ENST00000558264 COTL1Q14019 142 aa7.63□□□□□ -1.19
TPM1-210ENST00000558264 Q6ZTI0 123 aa7.63□□□□□ -1.19
TPM1-210ENST00000558264 SPATA3Q8NHX4 192 aa7.63□□□□□ -1.19
TPM1-210ENST00000558264 PLEKHB2Q96CS7 222 aa7.63□□□□□ -1.19
TPM1-210ENST00000558264 TIMM17AQ99595 171 aa7.63□□□□□ -1.19
TPM1-210ENST00000558264 NHP2Q9NX24 153 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms