RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-225	ENST00000557559	PCP4L1	A6NKN8	68 aa		4.62	□□□□□ -1.67
PRKCH-225	ENST00000557559	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.62	□□□□□ -1.67
PRKCH-225	ENST00000557559	INMT-MINDY4	F8WBC2	141 aa		4.62	□□□□□ -1.67
PRKCH-225	ENST00000557559		H3BVH4	76 aa		4.62	□□□□□ -1.67
PRKCH-225	ENST00000557559	TCRA	P04437	139 aa		4.62	□□□□□ -1.67
PRKCH-225	ENST00000557559	KRTAP10-8	P60410	259 aa		4.62	□□□□□ -1.67
PRKCH-225	ENST00000557559	IL15RA	Q13261	267 aa		4.62	□□□□□ -1.67
PRKCH-225	ENST00000557559	OR10G8	Q8NGN5	311 aa		4.62	□□□□□ -1.67
PRKCH-225	ENST00000557559	MARVELD1	Q9BSK0	173 aa		4.62	□□□□□ -1.67
PRKCH-225	ENST00000557559	PRR34	Q9NV39	138 aa		4.62	□□□□□ -1.67
PRKCH-225	ENST00000557559	PSG8	Q9UQ74	426 aa		4.62	□□□□□ -1.67
PRKCH-225	ENST00000557559	CBY1	Q9Y3M2	126 aa		4.62	□□□□□ -1.67
PRKCH-225	ENST00000557559	FABP5P3	A8MUU1	101 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559		B4DEV8	164 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559	LYRM1	O43325	122 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559	TCRB	P04435	133 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559	CHTF8	P0CG12	524 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559	GZMB	P10144	247 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559	DNLZ	Q5SXM8	178 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559	PRNT	Q86SH4	94 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559	SCGB1C1	Q8TD33	95 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559	GTSF1	Q8WW33	167 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559	SFRP2	Q96HF1	295 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559	SGK494	Q96LW2	274 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559	MED28	Q9H204	178 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559	JPT2	Q9H910	190 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559	MED9	Q9NWA0	146 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559	PKIG	Q9Y2B9	76 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559	PHLDA3	Q9Y5J5	127 aa		4.61	□□□□□ -1.67
PRKCH-225	ENST00000557559		A0A087WWL8	130 aa		4.6	□□□□□ -1.67
PRKCH-225	ENST00000557559	TRAV8-4	A0A0B4J246	113 aa		4.6	□□□□□ -1.67
PRKCH-225	ENST00000557559	IGKV3D-20	A0A0C4DH25	116 aa		4.6	□□□□□ -1.67
PRKCH-225	ENST00000557559	KRTAP9-6	A0A140TA67	174 aa		4.6	□□□□□ -1.67
PRKCH-225	ENST00000557559		P01737	135 aa		4.6	□□□□□ -1.67
PRKCH-225	ENST00000557559	TPT1	P13693	172 aa	Known RBP	4.6	□□□□□ -1.67
PRKCH-225	ENST00000557559	CLPSL2	Q6UWE3	100 aa		4.6	□□□□□ -1.67
PRKCH-225	ENST00000557559	ZFP82	Q8N141	532 aa		4.6	□□□□□ -1.67
PRKCH-225	ENST00000557559	LINC00269	Q8N2A0	174 aa		4.6	□□□□□ -1.67
PRKCH-225	ENST00000557559	SEC22C	Q9BRL7	303 aa		4.6	□□□□□ -1.67
PRKCH-225	ENST00000557559	NUDT15	Q9NV35	164 aa		4.6	□□□□□ -1.67
PRKCH-225	ENST00000557559	IGLV10-54	A0A075B6I4	117 aa		4.59	□□□□□ -1.67
PRKCH-225	ENST00000557559	TRBV25-1	A0A075B6N4	114 aa		4.59	□□□□□ -1.67
PRKCH-225	ENST00000557559	FAM231B	A6NCW3	169 aa		4.59	□□□□□ -1.67
PRKCH-225	ENST00000557559	KRBOX1	C9JBD0	128 aa		4.59	□□□□□ -1.67
PRKCH-225	ENST00000557559	NDUFS6	O75380	124 aa	Known RBP	4.59	□□□□□ -1.67
PRKCH-225	ENST00000557559	ARMS2	P0C7Q2	107 aa		4.59	□□□□□ -1.67
PRKCH-225	ENST00000557559	PET100	P0DJ07	73 aa		4.59	□□□□□ -1.67
PRKCH-225	ENST00000557559	ARL14EPL	P0DKL9	152 aa		4.59	□□□□□ -1.67
PRKCH-225	ENST00000557559	RAB4A	P20338	218 aa		4.59	□□□□□ -1.67
PRKCH-225	ENST00000557559	RBX1	P62877	108 aa		4.59	□□□□□ -1.67
PRKCH-225	ENST00000557559	CYCS	P99999	105 aa	Known RBP	4.59	□□□□□ -1.67
PRKCH-225	ENST00000557559	REG3A	Q06141	175 aa		4.59	□□□□□ -1.67
PRKCH-225	ENST00000557559	KRTAP26-1	Q6PEX3	210 aa		4.59	□□□□□ -1.67
PRKCH-225	ENST00000557559	LINC00474	Q9P2X8	69 aa		4.59	□□□□□ -1.67
PRKCH-225	ENST00000557559		F8W036	122 aa		4.58	□□□□□ -1.68
PRKCH-225	ENST00000557559		M0R381	172 aa		4.58	□□□□□ -1.68
PRKCH-225	ENST00000557559	MPC2	O95563	127 aa		4.58	□□□□□ -1.68
PRKCH-225	ENST00000557559	CDC34	P49427	236 aa	Predicted RBP	4.58	□□□□□ -1.68
PRKCH-225	ENST00000557559	ZNF56	Q15929	161 aa		4.58	□□□□□ -1.68
PRKCH-225	ENST00000557559	MAJIN	Q3KP22	176 aa		4.58	□□□□□ -1.68
PRKCH-225	ENST00000557559	LRRC37A5P	Q49AS3	106 aa		4.58	□□□□□ -1.68
PRKCH-225	ENST00000557559	LBH	Q53QV2	105 aa	Predicted RBP	4.58	□□□□□ -1.68
PRKCH-225	ENST00000557559	STPG4	Q8N801	248 aa		4.58	□□□□□ -1.68
PRKCH-225	ENST00000557559	NEXN-AS1	Q8NBZ9	246 aa		4.58	□□□□□ -1.68
PRKCH-225	ENST00000557559	TCEAL7	Q9BRU2	100 aa		4.58	□□□□□ -1.68
PRKCH-225	ENST00000557559	TMEM167B	Q9NRX6	74 aa		4.58	□□□□□ -1.68
PRKCH-225	ENST00000557559	VAX2	Q9UIW0	290 aa		4.58	□□□□□ -1.68
PRKCH-225	ENST00000557559	EPDR1	Q9UM22	224 aa		4.58	□□□□□ -1.68
PRKCH-225	ENST00000557559	ARL2-SNX15	V9GYD0	113 aa		4.58	□□□□□ -1.68
PRKCH-225	ENST00000557559	IGKV2-24	A0A0C4DH68	120 aa		4.57	□□□□□ -1.68
PRKCH-225	ENST00000557559	EIF3G	O75821	320 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
PRKCH-225	ENST00000557559	S100A8	P05109	93 aa		4.57	□□□□□ -1.68
PRKCH-225	ENST00000557559	STAG3L2	P0CL84	134 aa		4.57	□□□□□ -1.68
PRKCH-225	ENST00000557559	STAG3L3	P0CL85	134 aa		4.57	□□□□□ -1.68
PRKCH-225	ENST00000557559	SMIM6	P0DI80	62 aa		4.57	□□□□□ -1.68
PRKCH-225	ENST00000557559	RPS10	P46783	165 aa	Known RBP	4.57	□□□□□ -1.68
PRKCH-225	ENST00000557559	LINC00310	P59036	64 aa		4.57	□□□□□ -1.68
PRKCH-225	ENST00000557559	RAB2A	P61019	212 aa		4.57	□□□□□ -1.68
PRKCH-225	ENST00000557559	COX6A2	Q02221	97 aa		4.57	□□□□□ -1.68
PRKCH-225	ENST00000557559	FAM162B	Q5T6X4	162 aa		4.57	□□□□□ -1.68
PRKCH-225	ENST00000557559		Q6ZRP5	223 aa		4.57	□□□□□ -1.68
PRKCH-225	ENST00000557559	RAB24	Q969Q5	203 aa		4.57	□□□□□ -1.68
PRKCH-225	ENST00000557559	DERL1	Q9BUN8	251 aa		4.57	□□□□□ -1.68
PRKCH-225	ENST00000557559	TRAV26-2	A0A0B4J265	109 aa		4.56	□□□□□ -1.68
PRKCH-225	ENST00000557559	IGHV1-24	A0A0C4DH33	117 aa		4.56	□□□□□ -1.68
PRKCH-225	ENST00000557559	TRBV6-1	A0A0K0K1D8	114 aa		4.56	□□□□□ -1.68
PRKCH-225	ENST00000557559		H7C1H1	209 aa		4.56	□□□□□ -1.68
PRKCH-225	ENST00000557559		M0R036	132 aa		4.56	□□□□□ -1.68
PRKCH-225	ENST00000557559	HMGB3	O15347	200 aa	Known RBP	4.56	□□□□□ -1.68
PRKCH-225	ENST00000557559	S100P	P25815	95 aa		4.56	□□□□□ -1.68
PRKCH-225	ENST00000557559	GCHFR	P30047	84 aa		4.56	□□□□□ -1.68
PRKCH-225	ENST00000557559	GAGE6	Q13070	117 aa		4.56	□□□□□ -1.68
PRKCH-225	ENST00000557559	IQCJ	Q1A5X6	159 aa		4.56	□□□□□ -1.68
PRKCH-225	ENST00000557559	PRR27	Q6MZM9	219 aa		4.56	□□□□□ -1.68
PRKCH-225	ENST00000557559		Q86TA4	180 aa		4.56	□□□□□ -1.68
PRKCH-225	ENST00000557559	ZNF664	Q8N3J9	261 aa		4.56	□□□□□ -1.68
PRKCH-225	ENST00000557559	LYPD6B	Q8NI32	183 aa		4.56	□□□□□ -1.68
PRKCH-225	ENST00000557559		A0A1B0GUV1	79 aa		4.55	□□□□□ -1.68
PRKCH-225	ENST00000557559		A0A1W2PRE2	83 aa		4.55	□□□□□ -1.68
PRKCH-225	ENST00000557559	GRIFIN	A4D1Z8	144 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms