RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 APOC1P02654 83 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 PPBPP02775 128 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 RPSAP08865 295 aaKnown RBP2.53□□□□□ -2
MTHFD1-216ENST00000557539 S100A4P26447 101 aaKnown RBP2.53□□□□□ -2
MTHFD1-216ENST00000557539 PSMB8P28062 276 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 GUCA1AP43080 201 aaPredicted RBP2.53□□□□□ -2
MTHFD1-216ENST00000557539 KRTAP10-8P60410 259 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 CDC42P60953 191 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 KRTAP13-3Q3SY46 172 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 SPRNQ5BIV9 151 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 LYRM7Q5U5X0 104 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 CLVS1Q8IUQ0 354 aaPredicted RBP2.53□□□□□ -2
MTHFD1-216ENST00000557539 OR8B3Q8NGG8 313 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 TEX47Q8TBZ9 253 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 SPTSSAQ969W0 71 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 SLAMF6Q96DU3 332 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 AMELYQ99218 206 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 TMEM70Q9BUB7 260 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 YIPF3Q9GZM5 350 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 SH3BGRL3Q9H299 93 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 TMEM106BQ9NUM4 274 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 KAAG1Q9UBP8 84 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 HHLA3Q9XRX5 114 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 TRAV7A0A075B6U4 112 aa2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 SLC22A1O15245 554 aa2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 NDUFA2O43678 99 aa2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 ZNF73O43830 326 aaPredicted RBP2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 SULT1C4O75897 302 aa2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 SRIP30626 198 aa2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 SRP9P49458 86 aaKnown RBP2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 SNRPGP62308 76 aaKnown RBP2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 GLYATL3Q5SZD4 288 aa2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 LYZL1Q6UWQ5 148 aa2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 LCA10Q71F78 164 aa2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 EXOC3-AS1Q8N2X6 119 aa2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 TERB2Q8NHR7 220 aa2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 MIXL1Q9H2W2 232 aa2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 ERGIC3Q9Y282 383 aa2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 AMMECR1Q9Y4X0 333 aaPredicted RBP2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 AP4S1Q9Y587 144 aa2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 MPC1Q9Y5U8 109 aa2.52□□□□□ -2.01
MTHFD1-216ENST00000557539 AIPO00170 330 aa2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 OVOL1O14753 267 aa2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 GYPBP06028 91 aa2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 G6PCP35575 357 aa2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 RPS27P42677 84 aaKnown RBP2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 HINT1P49773 126 aaPredicted RBP2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 KLRD1Q13241 179 aa2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 OR2T2Q6IF00 324 aa2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 ZNF439Q8NDP4 499 aa2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 OR9Q1Q8NGQ5 310 aa2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 OR10K1Q8NGX5 313 aa2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 TMEM106AQ96A25 262 aa2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 MRPS24Q96EL2 167 aaKnown RBP2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 GINS4Q9BRT9 223 aa2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 C8orf4Q9NR00 106 aa2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 V9GYS6 101 aa2.51□□□□□ -2.01
MTHFD1-216ENST00000557539 NBDYA0A0U1RRE5 68 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 SDHAF1A6NFY7 115 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 RFPL4AA6NLU0 287 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 RFPL4AL1F8VTS6 287 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 H7C2G1 150 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 GNGT2O14610 69 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 CYB5BO43169 146 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 EMP1P54849 157 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 CAV3P56539 151 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 SUPT4H1P63272 117 aaKnown RBP2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 MIR17HGQ75NE6 70 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 DYNAPQ8N1N2 210 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 FAM24BQ8N5W8 94 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 OR5A2Q8NGI9 324 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 SCGB3A1Q96QR1 104 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 ADAT1Q9BUB4 502 aaKnown RBP2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 CHST6Q9GZX3 395 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 PBOV1Q9GZY1 135 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 RASL12Q9NYN1 266 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 R4GMQ9 66 aa2.5□□□□□ -2.01
MTHFD1-216ENST00000557539 FNDC10F2Z333 226 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 ZNF737O75373 536 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 RBP4P02753 201 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 P0C880 135 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 PIPP12273 146 aaPredicted RBP2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 LINC01554Q52M75 96 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 TRAPPC6BQ86SZ2 158 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 OR5AS1Q8N127 324 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 HIST3H2BBQ8N257 126 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 PYDC1Q8WXC3 89 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 PP6455Q8WZ26 134 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 AQP3Q92482 292 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 C20orf166-AS1Q96NR2 134 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 OR4C12Q96R67 309 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 RTL8AQ9BWD3 113 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 IMUPQ9GZP8 106 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 DPH3P1Q9H4G8 78 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 RERGLQ9H628 205 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 LINC00846Q9NV44 126 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 PSORS1C2Q9UIG4 136 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 OR52A1Q9UKL2 312 aa2.49□□□□□ -2.01
MTHFD1-216ENST00000557539 IGKV1-9A0A0C4DH69 117 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms