RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 SPXQ9BT56 116 aa11.43□□□□□ -0.58
TMEM55B-207ENST00000557041 HLA-DRB4X5D2U9 266 aa11.43□□□□□ -0.58
TMEM55B-207ENST00000557041 ATRQ13535 2644 aa11.43□□□□□ -0.58
TMEM55B-207ENST00000557041 C20orf78Q9BR46 151 aa11.43□□□□□ -0.58
TMEM55B-207ENST00000557041 TRGV1A0A0A0MS02 117 aa11.43□□□□□ -0.58
TMEM55B-207ENST00000557041 SAP30O75446 220 aa11.43□□□□□ -0.58
TMEM55B-207ENST00000557041 ZFP2Q6ZN57 461 aa11.43□□□□□ -0.58
TMEM55B-207ENST00000557041 CST9LQ9H4G1 147 aa11.43□□□□□ -0.58
TMEM55B-207ENST00000557041 HHLA3Q9XRX5 114 aa11.43□□□□□ -0.58
TMEM55B-207ENST00000557041 K7EQG2 157 aa11.42□□□□□ -0.58
TMEM55B-207ENST00000557041 CD28P10747 220 aa11.42□□□□□ -0.58
TMEM55B-207ENST00000557041 FGF6P10767 208 aa11.42□□□□□ -0.58
TMEM55B-207ENST00000557041 C19orf54Q5BKX5 351 aa11.42□□□□□ -0.58
TMEM55B-207ENST00000557041 ZNF479Q96JC4 524 aa11.42□□□□□ -0.58
TMEM55B-207ENST00000557041 ZNF702PQ9H963 129 aa11.42□□□□□ -0.58
TMEM55B-207ENST00000557041 C9orf118A6NHY6 69 aa11.42□□□□□ -0.58
TMEM55B-207ENST00000557041 K7ERU9 68 aa11.41□□□□□ -0.58
TMEM55B-207ENST00000557041 Q6YL49 198 aa11.41□□□□□ -0.58
TMEM55B-207ENST00000557041 TRGV11A0A075B6L2 103 aa11.41□□□□□ -0.58
TMEM55B-207ENST00000557041 SAMD13Q5VXD3 122 aa11.41□□□□□ -0.58
TMEM55B-207ENST00000557041 ATP6V0BQ99437 205 aa11.41□□□□□ -0.58
TMEM55B-207ENST00000557041 PSMB2P49721 201 aa11.4□□□□□ -0.58
TMEM55B-207ENST00000557041 ZNF418Q8TF45 676 aaPredicted RBP11.4□□□□□ -0.58
TMEM55B-207ENST00000557041 TRAV2A0A0B4J234 112 aa11.4□□□□□ -0.58
TMEM55B-207ENST00000557041 C11orf86A6NJI1 115 aa11.4□□□□□ -0.58
TMEM55B-207ENST00000557041 H3BRM9 83 aa11.4□□□□□ -0.58
TMEM55B-207ENST00000557041 IGLV2-18A0A075B6J9 118 aa11.4□□□□□ -0.59
TMEM55B-207ENST00000557041 CRIP2P52943 208 aaPredicted RBP11.39□□□□□ -0.59
TMEM55B-207ENST00000557041 MYMXA0A1B0GTQ4 84 aa11.39□□□□□ -0.59
TMEM55B-207ENST00000557041 TOMM6Q96B49 74 aa11.39□□□□□ -0.59
TMEM55B-207ENST00000557041 KLLNB2CW77 178 aa11.39□□□□□ -0.59
TMEM55B-207ENST00000557041 PMVKQ15126 192 aa11.39□□□□□ -0.59
TMEM55B-207ENST00000557041 FOXI2Q6ZQN5 318 aa11.39□□□□□ -0.59
TMEM55B-207ENST00000557041 CEND1Q8N111 149 aa11.39□□□□□ -0.59
TMEM55B-207ENST00000557041 PSMG3-AS1Q96PY0 264 aa11.39□□□□□ -0.59
TMEM55B-207ENST00000557041 UNC79Q9P2D8 2635 aa11.38□□□□□ -0.59
TMEM55B-207ENST00000557041 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.38□□□□□ -0.59
TMEM55B-207ENST00000557041 IGKV2-29A2NJV5 120 aaPredicted RBP11.38□□□□□ -0.59
TMEM55B-207ENST00000557041 H3BMG7 143 aa11.38□□□□□ -0.59
TMEM55B-207ENST00000557041 ADAMTSL5Q6ZMM2 481 aa11.38□□□□□ -0.59
TMEM55B-207ENST00000557041 SETXQ7Z333 2677 aaKnown RBP11.38□□□□□ -0.59
TMEM55B-207ENST00000557041 PGPEP1Q9NXJ5 209 aa11.37□□□□□ -0.59
TMEM55B-207ENST00000557041 UBR5O95071 2799 aaPredicted RBP11.37□□□□□ -0.59
TMEM55B-207ENST00000557041 A0A0J9YXV3 536 aa11.37□□□□□ -0.59
TMEM55B-207ENST00000557041 A0A1W2PPM0 123 aa11.37□□□□□ -0.59
TMEM55B-207ENST00000557041 OCIAD2Q56VL3 154 aa11.37□□□□□ -0.59
TMEM55B-207ENST00000557041 TRPT1Q86TN4 253 aaKnown RBP11.37□□□□□ -0.59
TMEM55B-207ENST00000557041 TRGV2A0A075B6R0 118 aa11.36□□□□□ -0.59
TMEM55B-207ENST00000557041 ZNF625Q96I27 306 aaPredicted RBP11.36□□□□□ -0.59
TMEM55B-207ENST00000557041 GEMIN7Q9H840 131 aaKnown RBP11.36□□□□□ -0.59
TMEM55B-207ENST00000557041 CITED2Q99967 270 aaPredicted RBP11.36□□□□□ -0.59
TMEM55B-207ENST00000557041 LINC01549A6NIU2 74 aa11.35□□□□□ -0.59
TMEM55B-207ENST00000557041 PLEKHB2Q96CS7 222 aa11.35□□□□□ -0.59
TMEM55B-207ENST00000557041 TEP1Q99973 2627 aaKnown RBP11.35□□□□□ -0.59
TMEM55B-207ENST00000557041 IGHV4-4A0A075B6R2 117 aa11.34□□□□□ -0.59
TMEM55B-207ENST00000557041 CCL24O00175 119 aa11.34□□□□□ -0.59
TMEM55B-207ENST00000557041 ZNF415Q09FC8 603 aa11.34□□□□□ -0.59
TMEM55B-207ENST00000557041 C12orf74Q32Q52 190 aa11.34□□□□□ -0.59
TMEM55B-207ENST00000557041 SPAG8Q99932 426 aaPredicted RBP11.34□□□□□ -0.59
TMEM55B-207ENST00000557041 Q9UF83 564 aa11.34□□□□□ -0.59
TMEM55B-207ENST00000557041 DNAJC9-AS1A6NH13 148 aa11.34□□□□□ -0.59
TMEM55B-207ENST00000557041 I3L3M4 83 aa11.34□□□□□ -0.59
TMEM55B-207ENST00000557041 WFDC10AQ9H1F0 79 aa11.34□□□□□ -0.59
TMEM55B-207ENST00000557041 Q6ZSV7 163 aa11.34□□□□□ -0.59
TMEM55B-207ENST00000557041 NEXN-AS1Q8NBZ9 246 aa11.34□□□□□ -0.59
TMEM55B-207ENST00000557041 TMEM238LA0A1B0GVL6 79 aa11.33□□□□□ -0.6
TMEM55B-207ENST00000557041 A6NJY4 79 aa11.33□□□□□ -0.6
TMEM55B-207ENST00000557041 H3BMM0 161 aa11.33□□□□□ -0.6
TMEM55B-207ENST00000557041 RRN3P1Q2M238 152 aa11.33□□□□□ -0.6
TMEM55B-207ENST00000557041 ZNRF2Q8NHG8 242 aa11.33□□□□□ -0.6
TMEM55B-207ENST00000557041 A0A1B0GWB2 263 aa11.33□□□□□ -0.6
TMEM55B-207ENST00000557041 SIVA1O15304 175 aa11.33□□□□□ -0.6
TMEM55B-207ENST00000557041 TRAV13-1A0A0B4J241 112 aa11.33□□□□□ -0.6
TMEM55B-207ENST00000557041 INSP01308 110 aa11.33□□□□□ -0.6
TMEM55B-207ENST00000557041 COTL1Q14019 142 aa11.33□□□□□ -0.6
TMEM55B-207ENST00000557041 SMR3AQ99954 134 aa11.33□□□□□ -0.6
TMEM55B-207ENST00000557041 CRYGDP07320 174 aa11.32□□□□□ -0.6
TMEM55B-207ENST00000557041 ETDBQ3ZM63 59 aa11.32□□□□□ -0.6
TMEM55B-207ENST00000557041 K7EP34 96 aa11.32□□□□□ -0.6
TMEM55B-207ENST00000557041 M0QY20 66 aa11.32□□□□□ -0.6
TMEM55B-207ENST00000557041 PF4P02776 101 aa11.32□□□□□ -0.6
TMEM55B-207ENST00000557041 MAP6D1Q9H9H5 199 aa11.32□□□□□ -0.6
TMEM55B-207ENST00000557041 GAGE12JA6NER3 117 aa11.31□□□□□ -0.6
TMEM55B-207ENST00000557041 GAGE4Q13068 117 aa11.31□□□□□ -0.6
TMEM55B-207ENST00000557041 GAGE5Q13069 117 aa11.31□□□□□ -0.6
TMEM55B-207ENST00000557041 GAGE13Q4V321 117 aa11.31□□□□□ -0.6
TMEM55B-207ENST00000557041 J3QQQ9 107 aa11.3□□□□□ -0.6
TMEM55B-207ENST00000557041 GAGE7O76087 117 aa11.3□□□□□ -0.6
TMEM55B-207ENST00000557041 GAGE12FP0CL80 117 aa11.3□□□□□ -0.6
TMEM55B-207ENST00000557041 GAGE12GP0CL81 117 aa11.3□□□□□ -0.6
TMEM55B-207ENST00000557041 GAGE12IP0CL82 117 aa11.3□□□□□ -0.6
TMEM55B-207ENST00000557041 RBMY1A1P0DJD3 496 aaKnown RBP11.3□□□□□ -0.6
TMEM55B-207ENST00000557041 RBMY1CP0DJD4 496 aa11.3□□□□□ -0.6
TMEM55B-207ENST00000557041 RBMY1FQ15415 496 aaKnown RBP11.3□□□□□ -0.6
TMEM55B-207ENST00000557041 SH2D6Q7Z4S9 175 aa11.3□□□□□ -0.6
TMEM55B-207ENST00000557041 TRAV8-3A0A0A6YYJ7 113 aa11.3□□□□□ -0.6
TMEM55B-207ENST00000557041 PAPPA-AS1Q5QFB9 102 aa11.3□□□□□ -0.6
TMEM55B-207ENST00000557041 NOP10Q9NPE3 64 aaKnown RBP11.3□□□□□ -0.6
TMEM55B-207ENST00000557041 M0R2P5 195 aa11.29□□□□□ -0.6
TMEM55B-207ENST00000557041 AZU1P20160 251 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 202 ms