RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 Q8TAT8 98 aa3.49□□□□□ -1.85
ATXN3-246ENST00000557030 LINC01560Q8TB33 94 aa3.49□□□□□ -1.85
ATXN3-246ENST00000557030 C20orf78Q9BR46 151 aa3.49□□□□□ -1.85
ATXN3-246ENST00000557030 MRPL35Q9NZE8 188 aaKnown RBP3.49□□□□□ -1.85
ATXN3-246ENST00000557030 TSSC4Q9Y5U2 329 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-246ENST00000557030 MINOS1-NBL1R4GNA1 71 aa3.49□□□□□ -1.85
ATXN3-246ENST00000557030 DNHD1Q96M86 4753 aa3.49□□□□□ -1.85
ATXN3-246ENST00000557030 ZGRF1Q86YA3 2104 aa3.49□□□□□ -1.85
ATXN3-246ENST00000557030 CSMD1Q96PZ7 3565 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 NOTCH2Q04721 2471 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 ICE1Q9Y2F5 2266 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 CENPVL3A0A0U1RRI6 287 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 H3BMG7 143 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 K7ERJ3 54 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 M0R381 172 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 APOMO95445 188 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 IGHG4P01861 327 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 CTSGP08311 255 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 RPL35AP18077 110 aaKnown RBP3.48□□□□□ -1.85
ATXN3-246ENST00000557030 PRTN3P24158 256 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 DLX1P56177 255 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 TCTAP57738 103 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 HERVK_113P61574 105 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 RPL32P62910 135 aaKnown RBP3.48□□□□□ -1.85
ATXN3-246ENST00000557030 SMAGPQ0VAQ4 97 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 KLRD1Q13241 179 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 SRSF9Q13242 221 aaKnown RBP eCLIP3.48□□□□□ -1.85
ATXN3-246ENST00000557030 WFDC2Q14508 124 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 SPANXN1Q5VSR9 72 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 DYNAPQ8N1N2 210 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 Q8N6K4 173 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 DLX4Q92988 240 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-246ENST00000557030 TOMM6Q96B49 74 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 SCGB3A1Q96QR1 104 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 SMIM2Q9BVW6 85 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 GTSF1LQ9H1H1 148 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 MRPL16Q9NX20 251 aaKnown RBP3.48□□□□□ -1.85
ATXN3-246ENST00000557030 CYSLTR1Q9Y271 337 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 UFC1Q9Y3C8 167 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 SMAD5-AS1Q9Y6J3 95 aa3.48□□□□□ -1.85
ATXN3-246ENST00000557030 ARFGEF3Q5TH69 2177 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 TRBV20-1A0A075B6N2 111 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 TRBV7-1A0A0A6YYK4 115 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 IGHV1-69DA0A0B4J2H0 117 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 IGHV7-4-1A0A0J9YVY3 117 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 GATA1P15976 413 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-246ENST00000557030 XGP55808 180 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 PRB3Q04118 309 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-246ENST00000557030 ERCC8Q13216 396 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 ETDBQ3ZM63 59 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 C11orf71Q6IPW1 123 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 CLEC2AQ6UVW9 174 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 FAM159AQ6UWV7 190 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 EEF1AKMT3Q96AZ1 226 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 C2orf48Q96LS8 159 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 LINC00477Q96M19 166 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 FAM218AQ96MZ4 157 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 METTL26Q96S19 204 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 AGPAT4-IT1Q9H0P7 198 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 DPH3P1Q9H4G8 78 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 PRO0461Q9UI25 63 aa3.47□□□□□ -1.85
ATXN3-246ENST00000557030 SPTAN1Q13813 2472 aaKnown RBP3.47□□□□□ -1.85
ATXN3-246ENST00000557030 USP9YO00507 2555 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-246ENST00000557030 TRAV21A0A0B4J279 112 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 TRBV7-9A0A0J9YWB2 115 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 TMEM262E9PQX1 116 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 M0QXV9 152 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 CCL21O00585 134 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 OVOL1O14753 267 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 TRGV3P03979 118 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 LGALS1P09382 135 aaKnown RBP3.46□□□□□ -1.86
ATXN3-246ENST00000557030 HLA-DMBP28068 263 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 ASIPP42127 132 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 UCNP55089 124 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 CKS1BP61024 79 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 LMO4P61968 165 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 NDPQ00604 133 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 KLRB1Q12918 225 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 CFAP126Q5VTH2 177 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 SCGB1D4Q6XE38 83 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 VMO1Q7Z5L0 202 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 ZNF418Q8TF45 676 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-246ENST00000557030 PPDPFLQ8WWR9 84 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 TMEM141Q96I45 108 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 PRADC1Q9BSG0 188 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 TTTY13Q9BZ97 58 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 S4R3C0 116 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 NAV3Q8IVL0 2385 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 ZFHX3Q15911 3703 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 TNCP24821 2201 aa3.46□□□□□ -1.86
ATXN3-246ENST00000557030 ITPR2Q14571 2701 aa3.45□□□□□ -1.86
ATXN3-246ENST00000557030 A0A087WZ39 114 aa3.45□□□□□ -1.86
ATXN3-246ENST00000557030 IGHV7-81A0A0B4J1V7 117 aa3.45□□□□□ -1.86
ATXN3-246ENST00000557030 TRAV8-2A0A0B4J237 113 aa3.45□□□□□ -1.86
ATXN3-246ENST00000557030 FAM223BA6NKX1 122 aa3.45□□□□□ -1.86
ATXN3-246ENST00000557030 ZNF815PA8K554 130 aa3.45□□□□□ -1.86
ATXN3-246ENST00000557030 H3BVH4 76 aa3.45□□□□□ -1.86
ATXN3-246ENST00000557030 LY6HO94772 140 aa3.45□□□□□ -1.86
ATXN3-246ENST00000557030 IGHV3-23P01764 117 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms