RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 DERL1Q9BUN8 251 aa7.72□□□□□ -1.17
ACTN1-221ENST00000556571 PHLDA3Q9Y5J5 127 aa7.72□□□□□ -1.17
ACTN1-221ENST00000556571 RNF213Q63HN8 5207 aa7.71□□□□□ -1.18
ACTN1-221ENST00000556571 ARMS2P0C7Q2 107 aa7.71□□□□□ -1.18
ACTN1-221ENST00000556571 ATRAIDQ6UW56 229 aa7.71□□□□□ -1.18
ACTN1-221ENST00000556571 CHCHD7Q9BUK0 85 aa7.71□□□□□ -1.18
ACTN1-221ENST00000556571 MLST8Q9BVC4 326 aa7.71□□□□□ -1.18
ACTN1-221ENST00000556571 SAMD10Q9BYL1 202 aa7.71□□□□□ -1.18
ACTN1-221ENST00000556571 BIN3Q9NQY0 253 aa7.71□□□□□ -1.18
ACTN1-221ENST00000556571 Q9UF83 564 aa7.71□□□□□ -1.18
ACTN1-221ENST00000556571 A0A087WX48 190 aa7.7□□□□□ -1.18
ACTN1-221ENST00000556571 HNRNPA3P51991 378 aaKnown RBP7.7□□□□□ -1.18
ACTN1-221ENST00000556571 Q0VG73 95 aa7.7□□□□□ -1.18
ACTN1-221ENST00000556571 DNLZQ5SXM8 178 aa7.7□□□□□ -1.18
ACTN1-221ENST00000556571 UFSP1Q6NVU6 142 aa7.7□□□□□ -1.18
ACTN1-221ENST00000556571 KCNIP4Q6PIL6 250 aa7.7□□□□□ -1.18
ACTN1-221ENST00000556571 C14orf178Q8N769 122 aaPredicted RBP7.7□□□□□ -1.18
ACTN1-221ENST00000556571 SMIM12Q96EX1 92 aa7.7□□□□□ -1.18
ACTN1-221ENST00000556571 PKHD1L1Q86WI1 4243 aa7.69□□□□□ -1.18
ACTN1-221ENST00000556571 RAB19A4D1S5 217 aa7.69□□□□□ -1.18
ACTN1-221ENST00000556571 M0R381 172 aa7.69□□□□□ -1.18
ACTN1-221ENST00000556571 RHODO00212 210 aa7.69□□□□□ -1.18
ACTN1-221ENST00000556571 ZFP82Q8N141 532 aa7.69□□□□□ -1.18
ACTN1-221ENST00000556571 EIF5A2Q9GZV4 153 aaKnown RBP7.69□□□□□ -1.18
ACTN1-221ENST00000556571 JPT2Q9H910 190 aa7.69□□□□□ -1.18
ACTN1-221ENST00000556571 XKRY2A2RUG3 117 aa7.68□□□□□ -1.18
ACTN1-221ENST00000556571 MT1HL1P0DM35 61 aa7.68□□□□□ -1.18
ACTN1-221ENST00000556571 DMRTA1Q5VZB9 504 aa7.68□□□□□ -1.18
ACTN1-221ENST00000556571 C1orf43Q9BWL3 253 aa7.68□□□□□ -1.18
ACTN1-221ENST00000556571 LRP2P98164 4655 aa7.67□□□□□ -1.18
ACTN1-221ENST00000556571 P01737 135 aa7.67□□□□□ -1.18
ACTN1-221ENST00000556571 CXCL1P09341 107 aa7.67□□□□□ -1.18
ACTN1-221ENST00000556571 CEBPGP53567 150 aa7.67□□□□□ -1.18
ACTN1-221ENST00000556571 RPS20P60866 119 aaKnown RBP7.67□□□□□ -1.18
ACTN1-221ENST00000556571 RPL19P84098 196 aaKnown RBP7.67□□□□□ -1.18
ACTN1-221ENST00000556571 FAM74A4Q5TZK3 123 aa7.67□□□□□ -1.18
ACTN1-221ENST00000556571 SPANXN1Q5VSR9 72 aa7.67□□□□□ -1.18
ACTN1-221ENST00000556571 Q6ZRU5 148 aa7.67□□□□□ -1.18
ACTN1-221ENST00000556571 TMEM250H0YL14 139 aa7.66□□□□□ -1.18
ACTN1-221ENST00000556571 DGAT2L7PQ6IED9 249 aa7.66□□□□□ -1.18
ACTN1-221ENST00000556571 OR2D3Q8NGH3 330 aa7.66□□□□□ -1.18
ACTN1-221ENST00000556571 LYPD6BQ8NI32 183 aa7.66□□□□□ -1.18
ACTN1-221ENST00000556571 TPPP3Q9BW30 176 aa7.66□□□□□ -1.18
ACTN1-221ENST00000556571 A0A087WWL8 130 aa7.65□□□□□ -1.18
ACTN1-221ENST00000556571 USP17L23D6RBM5 183 aa7.65□□□□□ -1.18
ACTN1-221ENST00000556571 TMEM262E9PQX1 116 aa7.65□□□□□ -1.18
ACTN1-221ENST00000556571 CRPP02741 224 aa7.65□□□□□ -1.18
ACTN1-221ENST00000556571 SSTP61278 116 aa7.65□□□□□ -1.18
ACTN1-221ENST00000556571 ENHOQ6UWT2 76 aa7.65□□□□□ -1.18
ACTN1-221ENST00000556571 C9orf163Q8N9P6 203 aa7.65□□□□□ -1.18
ACTN1-221ENST00000556571 SFRP2Q96HF1 295 aa7.65□□□□□ -1.18
ACTN1-221ENST00000556571 TRBV20OR9-2A0A075B6H5 130 aa7.64□□□□□ -1.19
ACTN1-221ENST00000556571 TRBV10-1A0A0K0K1A3 114 aa7.64□□□□□ -1.19
ACTN1-221ENST00000556571 OR5AL1P0C617 328 aa7.64□□□□□ -1.19
ACTN1-221ENST00000556571 SMIM17P0DL12 118 aa7.64□□□□□ -1.19
ACTN1-221ENST00000556571 RPL36AP83881 106 aaKnown RBP7.64□□□□□ -1.19
ACTN1-221ENST00000556571 TEX261Q6UWH6 196 aa7.64□□□□□ -1.19
ACTN1-221ENST00000556571 FER1L6-AS1Q8NA97 138 aa7.64□□□□□ -1.19
ACTN1-221ENST00000556571 OR10AG1Q8NH19 301 aa7.64□□□□□ -1.19
ACTN1-221ENST00000556571 RPL36ALQ969Q0 106 aaKnown RBP7.64□□□□□ -1.19
ACTN1-221ENST00000556571 TRBV7-3A0A075B6L6 115 aa7.63□□□□□ -1.19
ACTN1-221ENST00000556571 MUC21A0A0G2JKD1 596 aa7.63□□□□□ -1.19
ACTN1-221ENST00000556571 MUC21A0A140T8X8 626 aa7.63□□□□□ -1.19
ACTN1-221ENST00000556571 C19orf71A6NCJ1 209 aa7.63□□□□□ -1.19
ACTN1-221ENST00000556571 SNAI2O43623 268 aa7.63□□□□□ -1.19
ACTN1-221ENST00000556571 PRSS1P07477 247 aa7.63□□□□□ -1.19
ACTN1-221ENST00000556571 UBE2D3P61077 147 aa7.63□□□□□ -1.19
ACTN1-221ENST00000556571 UBE2D2P62837 147 aa7.63□□□□□ -1.19
ACTN1-221ENST00000556571 C15orf54Q8N8G6 183 aa7.63□□□□□ -1.19
ACTN1-221ENST00000556571 FAM210AQ96ND0 272 aa7.63□□□□□ -1.19
ACTN1-221ENST00000556571 AP1S3Q96PC3 154 aa7.63□□□□□ -1.19
ACTN1-221ENST00000556571 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.63□□□□□ -1.19
ACTN1-221ENST00000556571 TRBV6-8A0A0A6YYG3 113 aa7.62□□□□□ -1.19
ACTN1-221ENST00000556571 F2Z2F3 143 aa7.62□□□□□ -1.19
ACTN1-221ENST00000556571 F5H697 171 aa7.62□□□□□ -1.19
ACTN1-221ENST00000556571 HLA-DQA1P01909 254 aa7.62□□□□□ -1.19
ACTN1-221ENST00000556571 GZMBP10144 247 aa7.62□□□□□ -1.19
ACTN1-221ENST00000556571 ZNF56Q15929 161 aa7.62□□□□□ -1.19
ACTN1-221ENST00000556571 MIAQ16674 131 aa7.62□□□□□ -1.19
ACTN1-221ENST00000556571 SDIM1Q6ZPB5 146 aa7.62□□□□□ -1.19
ACTN1-221ENST00000556571 OCC1Q8TAD7 63 aa7.62□□□□□ -1.19
ACTN1-221ENST00000556571 SMIM7Q9BQ49 75 aa7.62□□□□□ -1.19
ACTN1-221ENST00000556571 SSBP4Q9BWG4 385 aaPredicted RBP7.62□□□□□ -1.19
ACTN1-221ENST00000556571 RPP21Q9H633 154 aaKnown RBP7.62□□□□□ -1.19
ACTN1-221ENST00000556571 NDUFS6O75380 124 aaKnown RBP7.61□□□□□ -1.19
ACTN1-221ENST00000556571 ANGP03950 147 aaKnown RBP7.61□□□□□ -1.19
ACTN1-221ENST00000556571 PKIAP61925 76 aa7.61□□□□□ -1.19
ACTN1-221ENST00000556571 CACNG7P62955 275 aa7.61□□□□□ -1.19
ACTN1-221ENST00000556571 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.61□□□□□ -1.19
ACTN1-221ENST00000556571 NUDT10Q8NFP7 164 aa7.61□□□□□ -1.19
ACTN1-221ENST00000556571 OR10G8Q8NGN5 311 aa7.61□□□□□ -1.19
ACTN1-221ENST00000556571 NUDT11Q96G61 164 aa7.61□□□□□ -1.19
ACTN1-221ENST00000556571 ZNF727A8MUV8 499 aa7.6□□□□□ -1.19
ACTN1-221ENST00000556571 PANO1I0J062 215 aa7.6□□□□□ -1.19
ACTN1-221ENST00000556571 K7EN84 100 aa7.6□□□□□ -1.19
ACTN1-221ENST00000556571 RAB4BP61018 213 aa7.6□□□□□ -1.19
ACTN1-221ENST00000556571 MPV17L2Q567V2 206 aa7.6□□□□□ -1.19
ACTN1-221ENST00000556571 RNASE7Q9H1E1 156 aaKnown RBP7.6□□□□□ -1.19
ACTN1-221ENST00000556571 TRGC1P0CF51 173 aa7.59□□□□□ -1.19
ACTN1-221ENST00000556571 IGLC6P0CF74 106 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms