RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 TMEM236Q5W0B7 351 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 XAF1Q6GPH4 301 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 C10orf99Q6UWK7 81 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 ZNF493Q6ZR52 646 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 Q8N2B8 174 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 C3orf22Q8N5N4 141 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 OR51H1Q8NH63 302 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 COPS9Q8WXC6 57 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 AQP3Q92482 292 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 H1FXQ92522 213 aaKnown RBP2.71□□□□□ -1.98
PRPF39-209ENST00000556353 RAB37Q96AX2 223 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 IGF2BP2-AS1Q96M15 143 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 YPEL2Q96QA6 119 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 NAA38Q9BRA0 125 aaKnown RBP2.71□□□□□ -1.98
PRPF39-209ENST00000556353 EIF5A2Q9GZV4 153 aaKnown RBP2.71□□□□□ -1.98
PRPF39-209ENST00000556353 SMDT1Q9H4I9 107 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 RBM12B-AS1Q9P1G2 102 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 CACFD1Q9UGQ2 172 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 AMMECR1Q9Y4X0 333 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-209ENST00000556353 PXMP4Q9Y6I8 212 aa2.71□□□□□ -1.98
PRPF39-209ENST00000556353 TRAV8-1A0A0A6YYK1 113 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 TRAV8-6A0A0B4J262 113 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 LOC100131303A0A0U1RQF7 123 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 ODAMA1E959 279 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 C7orf77A4D0Y5 90 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 PGPA6NDG6 321 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 OR2T8A6NH00 312 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 C17orf98A8MV24 154 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 NDUFC2-KCTD14E9PQ53 114 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 H3BSH0 61 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 GABARAPH6UMI1 98 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 M0R2P5 195 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 SOCS1O15524 211 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 NDUFB3O43676 98 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 SFT2D2O95562 160 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 CYB5AP00167 134 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 CRYGAP11844 174 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 PIPP12273 146 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-209ENST00000556353 ASIPP42127 132 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 SMIM11AP58511 58 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 BLCAPP62952 87 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 DIAPH2-AS1Q14236 149 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 ADIRFQ15847 76 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 ZNF660Q6AZW8 331 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-209ENST00000556353 RBMXL1Q96E39 390 aaKnown RBP2.7□□□□□ -1.98
PRPF39-209ENST00000556353 GNPNAT1Q96EK6 184 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-209ENST00000556353 BORCS8Q96FH0 119 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 TM2D3Q9BRN9 247 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 ST20Q9HBF5 79 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 TMEM242Q9NWH2 141 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 DNAH11Q96DT5 4516 aa2.7□□□□□ -1.98
PRPF39-209ENST00000556353 DYNC1H1Q14204 4646 aaKnown RBP2.69□□□□□ -1.98
PRPF39-209ENST00000556353 KIAA1109Q2LD37 5005 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 IGKV1-9A0A0C4DH69 117 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 IGKV1-12A0A0C4DH73 117 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 C3orf85A0A1B0GTC6 90 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 FAM236AA0A1B0GUQ0 79 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 FAM236BA0A1B0GV22 79 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 IRGMA1A4Y4 181 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 H3BRM9 83 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 M0R1X1 148 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 PIN1P1O15428 100 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 GSTZ1O43708 216 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-209ENST00000556353 NDUFS5O43920 106 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 PITX3O75364 302 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 NDUFB6O95139 128 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 IGKV1D-12P01611 117 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 TRGC1P0CF51 173 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 PYYP10082 97 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 CD24P25063 80 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 PSMB2P49721 201 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 DAPP51397 102 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 RND2P52198 227 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 NSUN5P1Q3KNT7 163 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 Q56UQ5 140 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 LINC01545Q5VT33 79 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 CLEC19AQ6UXS0 136 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 C10orf126Q8N4M7 172 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 VSTM2AQ8TAG5 236 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 SCGB1C1Q8TD33 95 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 C2orf50Q96LR7 162 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 OTORQ9NRC9 128 aa2.69□□□□□ -1.98
PRPF39-209ENST00000556353 ABCA13Q86UQ4 5058 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 TRBV24-1A0A075B6N3 115 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 TRAV12-2A0A075B6T6 113 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 SMIM26A0A096LP01 95 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 IGHV1-58A0A0C4DH39 117 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 ZNF727A8MUV8 499 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 ZNF705FA8MVS1 300 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-209ENST00000556353 J3QRE1 110 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 HYPMO75409 117 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 SIX6O95475 246 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 MT-ND6P03923 174 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 MT-ATP8P03928 68 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 TRGC2P03986 189 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 ZNF705DP0CH99 300 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-209ENST00000556353 ZNF705BP0CI00 300 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-209ENST00000556353 IGHV1-8P0DP01 117 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 POLR2IP36954 125 aaKnown RBP2.68□□□□□ -1.98
PRPF39-209ENST00000556353 INPP1P49441 399 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms