RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 PSMG3Q9BT73 122 aaPredicted RBP6.86□□□□□ -1.31
SYNE2-221ENST00000556342 PHLDA3Q9Y5J5 127 aa6.86□□□□□ -1.31
SYNE2-221ENST00000556342 A0A1W2PRE2 83 aa6.85□□□□□ -1.31
SYNE2-221ENST00000556342 M0R381 172 aa6.85□□□□□ -1.31
SYNE2-221ENST00000556342 SH2D1AO60880 128 aa6.85□□□□□ -1.31
SYNE2-221ENST00000556342 MBP02144 154 aa6.85□□□□□ -1.31
SYNE2-221ENST00000556342 TPT1P13693 172 aaKnown RBP6.85□□□□□ -1.31
SYNE2-221ENST00000556342 RPL19P84098 196 aaKnown RBP6.85□□□□□ -1.31
SYNE2-221ENST00000556342 MIAQ16674 131 aa6.85□□□□□ -1.31
SYNE2-221ENST00000556342 SDIM1Q6ZPB5 146 aa6.85□□□□□ -1.31
SYNE2-221ENST00000556342 OR10G8Q8NGN5 311 aa6.85□□□□□ -1.31
SYNE2-221ENST00000556342 MARVELD1Q9BSK0 173 aa6.85□□□□□ -1.31
SYNE2-221ENST00000556342 A0A0D9SG52 128 aa6.84□□□□□ -1.31
SYNE2-221ENST00000556342 PEX7O00628 323 aa6.84□□□□□ -1.31
SYNE2-221ENST00000556342 UPK1BO75841 260 aa6.84□□□□□ -1.31
SYNE2-221ENST00000556342 IFNA7P01567 189 aa6.84□□□□□ -1.31
SYNE2-221ENST00000556342 ATP6V0CP27449 155 aa6.84□□□□□ -1.31
SYNE2-221ENST00000556342 SERF2P84101 59 aa6.84□□□□□ -1.31
SYNE2-221ENST00000556342 COX8CQ7Z4L0 72 aa6.84□□□□□ -1.31
SYNE2-221ENST00000556342 ZFP82Q8N141 532 aa6.84□□□□□ -1.31
SYNE2-221ENST00000556342 ACTR3CQ9C0K3 210 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-221ENST00000556342 PTTG1O95997 202 aa6.83□□□□□ -1.32
SYNE2-221ENST00000556342 PKIAP61925 76 aa6.83□□□□□ -1.32
SYNE2-221ENST00000556342 CIRBPQ14011 172 aaKnown RBP6.83□□□□□ -1.32
SYNE2-221ENST00000556342 FAM162BQ5T6X4 162 aa6.83□□□□□ -1.32
SYNE2-221ENST00000556342 KRTAP26-1Q6PEX3 210 aa6.83□□□□□ -1.32
SYNE2-221ENST00000556342 NEXN-AS1Q8NBZ9 246 aa6.83□□□□□ -1.32
SYNE2-221ENST00000556342 CHCHD5Q9BSY4 110 aa6.83□□□□□ -1.32
SYNE2-221ENST00000556342 PRR34Q9NV39 138 aa6.83□□□□□ -1.32
SYNE2-221ENST00000556342 TMSB15BA0A087X1C1 80 aa6.82□□□□□ -1.32
SYNE2-221ENST00000556342 UBE2G2P60604 165 aa6.82□□□□□ -1.32
SYNE2-221ENST00000556342 RGS21Q2M5E4 152 aa6.82□□□□□ -1.32
SYNE2-221ENST00000556342 CLPSL2Q6UWE3 100 aa6.82□□□□□ -1.32
SYNE2-221ENST00000556342 TNFSF18Q9UNG2 199 aa6.82□□□□□ -1.32
SYNE2-221ENST00000556342 ZFP30Q9Y2G7 519 aa6.82□□□□□ -1.32
SYNE2-221ENST00000556342 RAB4BP61018 213 aa6.81□□□□□ -1.32
SYNE2-221ENST00000556342 CNBPP62633 177 aaKnown RBP6.81□□□□□ -1.32
SYNE2-221ENST00000556342 RBX1P62877 108 aa6.81□□□□□ -1.32
SYNE2-221ENST00000556342 ZNF726P1Q15940 193 aa6.81□□□□□ -1.32
SYNE2-221ENST00000556342 ZNF674Q2M3X9 581 aa6.81□□□□□ -1.32
SYNE2-221ENST00000556342 PRR27Q6MZM9 219 aa6.81□□□□□ -1.32
SYNE2-221ENST00000556342 NTM-AS1Q6ZSK4 140 aa6.81□□□□□ -1.32
SYNE2-221ENST00000556342 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-221ENST00000556342 CLRN3Q8NCR9 226 aa6.81□□□□□ -1.32
SYNE2-221ENST00000556342 HIST1H2BAQ96A08 127 aa6.81□□□□□ -1.32
SYNE2-221ENST00000556342 FAM74A7A6NL05 159 aa6.8□□□□□ -1.32
SYNE2-221ENST00000556342 ZNF56Q15929 161 aa6.8□□□□□ -1.32
SYNE2-221ENST00000556342 CT83Q5H943 113 aa6.8□□□□□ -1.32
SYNE2-221ENST00000556342 LINC00269Q8N2A0 174 aa6.8□□□□□ -1.32
SYNE2-221ENST00000556342 FMC1Q96HJ9 113 aa6.8□□□□□ -1.32
SYNE2-221ENST00000556342 AQP10Q96PS8 301 aa6.8□□□□□ -1.32
SYNE2-221ENST00000556342 NKX6-2Q9C056 277 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-221ENST00000556342 TMA7Q9Y2S6 64 aaKnown RBP6.8□□□□□ -1.32
SYNE2-221ENST00000556342 hCG_2014768A0A024R1R8 64 aa6.79□□□□□ -1.32
SYNE2-221ENST00000556342 A0A087WYN8 130 aa6.79□□□□□ -1.32
SYNE2-221ENST00000556342 CTXND1A0A1B0GTU2 59 aa6.79□□□□□ -1.32
SYNE2-221ENST00000556342 UBE2G1P62253 170 aa6.79□□□□□ -1.32
SYNE2-221ENST00000556342 TMEM97Q5BJF2 176 aa6.79□□□□□ -1.32
SYNE2-221ENST00000556342 OR10AG1Q8NH19 301 aa6.79□□□□□ -1.32
SYNE2-221ENST00000556342 RNF185Q96GF1 192 aa6.79□□□□□ -1.32
SYNE2-221ENST00000556342 VAX2Q9UIW0 290 aa6.79□□□□□ -1.32
SYNE2-221ENST00000556342 IGHV3-64A0A075B6Q5 118 aa6.78□□□□□ -1.32
SYNE2-221ENST00000556342 TRBV6-1A0A0K0K1D8 114 aa6.78□□□□□ -1.32
SYNE2-221ENST00000556342 hDV102S1A0JD36 115 aa6.78□□□□□ -1.32
SYNE2-221ENST00000556342 LTAP01374 205 aa6.78□□□□□ -1.32
SYNE2-221ENST00000556342 CHTF8P0CG12 524 aa6.78□□□□□ -1.32
SYNE2-221ENST00000556342 GAGE6Q13070 117 aa6.78□□□□□ -1.32
SYNE2-221ENST00000556342 SPACA4Q8TDM5 124 aa6.78□□□□□ -1.32
SYNE2-221ENST00000556342 DPH3Q96FX2 82 aa6.78□□□□□ -1.32
SYNE2-221ENST00000556342 IGLV10-54A0A075B6I4 117 aa6.77□□□□□ -1.33
SYNE2-221ENST00000556342 PFDN1O60925 122 aa6.77□□□□□ -1.33
SYNE2-221ENST00000556342 REG3AQ06141 175 aa6.77□□□□□ -1.33
SYNE2-221ENST00000556342 DERL1Q9BUN8 251 aa6.77□□□□□ -1.33
SYNE2-221ENST00000556342 ZNF471Q9BX82 626 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-221ENST00000556342 DPH3P1Q9H4G8 78 aa6.77□□□□□ -1.33
SYNE2-221ENST00000556342 TRBV25-1A0A075B6N4 114 aa6.76□□□□□ -1.33
SYNE2-221ENST00000556342 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-221ENST00000556342 B5MCH6 92 aa6.76□□□□□ -1.33
SYNE2-221ENST00000556342 F5H697 171 aa6.76□□□□□ -1.33
SYNE2-221ENST00000556342 PHOX2AO14813 284 aa6.76□□□□□ -1.33
SYNE2-221ENST00000556342 SNAI2O43623 268 aa6.76□□□□□ -1.33
SYNE2-221ENST00000556342 CXCL1P09341 107 aa6.76□□□□□ -1.33
SYNE2-221ENST00000556342 DEFA1P59665 94 aa6.76□□□□□ -1.33
SYNE2-221ENST00000556342 DEFA3P59666 94 aa6.76□□□□□ -1.33
SYNE2-221ENST00000556342 IQCJQ1A5X6 159 aa6.76□□□□□ -1.33
SYNE2-221ENST00000556342 RPL7L1Q6DKI1 246 aaKnown RBP6.76□□□□□ -1.33
SYNE2-221ENST00000556342 PLAC8Q9NZF1 115 aa6.76□□□□□ -1.33
SYNE2-221ENST00000556342 TRAV8-4A0A0B4J246 113 aa6.75□□□□□ -1.33
SYNE2-221ENST00000556342 IGHV1-24A0A0C4DH33 117 aa6.75□□□□□ -1.33
SYNE2-221ENST00000556342 MUC21A0A0G2JKD1 596 aa6.75□□□□□ -1.33
SYNE2-221ENST00000556342 MUC21A0A140T8X8 626 aa6.75□□□□□ -1.33
SYNE2-221ENST00000556342 P01737 135 aa6.75□□□□□ -1.33
SYNE2-221ENST00000556342 AKR1C3P42330 323 aa6.75□□□□□ -1.33
SYNE2-221ENST00000556342 SPANXN1Q5VSR9 72 aa6.75□□□□□ -1.33
SYNE2-221ENST00000556342 C20orf203Q8NBC4 194 aa6.75□□□□□ -1.33
SYNE2-221ENST00000556342 C7orf33Q8WU49 177 aa6.75□□□□□ -1.33
SYNE2-221ENST00000556342 LINC01600Q96MT4 127 aa6.75□□□□□ -1.33
SYNE2-221ENST00000556342 TCEAL7Q9BRU2 100 aa6.75□□□□□ -1.33
SYNE2-221ENST00000556342 BORCS7-ASMTA0A0B4J1R7 106 aa6.74□□□□□ -1.33
SYNE2-221ENST00000556342 MAP1LC3B2A6NCE7 125 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms