RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 KLLNB2CW77 178 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 C9JCJ5 164 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 PRSS46E5RG02 174 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 PPP1R2P9O14990 202 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 SYNGR2O43760 224 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 SSSCA1O60232 199 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 PFN1P07737 140 aaKnown RBP3.14□□□□□ -1.91
ATXN3-239ENST00000556315 SNRPCP09234 159 aaKnown RBP3.14□□□□□ -1.91
ATXN3-239ENST00000556315 LINC00869P0C866 280 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 BCL2P10415 239 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 IAPPP10997 89 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 RNASE4P34096 147 aaKnown RBP3.14□□□□□ -1.91
ATXN3-239ENST00000556315 RPS10P46783 165 aaKnown RBP3.14□□□□□ -1.91
ATXN3-239ENST00000556315 SSTP61278 116 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 POLR2GP62487 172 aaKnown RBP eCLIP3.14□□□□□ -1.91
ATXN3-239ENST00000556315 WFDC2Q14508 124 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 LAGE3Q14657 143 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 ELOBQ15370 118 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 LINC01620Q4KN68 170 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
ATXN3-239ENST00000556315 PATE2Q6UY27 113 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 Q6ZRU5 148 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 BPIFA4PQ86YQ2 179 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 Q8N976 141 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 LINC00477Q96M19 166 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 IMMP2LQ96T52 175 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 PAXXQ9BUH6 204 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 GGACTQ9BVM4 153 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 MANBALQ9NQG1 85 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 NIT2Q9NQR4 276 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 TRAV9-1A0A075B6T8 112 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 IGHV1OR15-1A0A075B7D0 117 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 CTXND1A0A1B0GTU2 59 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 C17orf112F2Z3M2 114 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 LECT2O14960 151 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 IGHV3-30P01768 117 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 IGHV3-33P01772 117 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 GPX1P07203 203 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 IGHV3-30-3P0DP02 117 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 IGHV3-30-5P0DP03 117 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 FHITP49789 147 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 HNRNPA3P51991 378 aaKnown RBP3.13□□□□□ -1.91
ATXN3-239ENST00000556315 OR10J3Q5JRS4 329 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 SPANXN5Q5MJ07 72 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 TMEM14EPQ6UXP3 125 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 LINC00305Q7Z4B0 112 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 ZFP82Q8N141 532 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 NHLRC2Q8NBF2 726 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 BAALCQ8WXS3 180 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 RASL10AQ92737 203 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 FAM19A4Q96LR4 140 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 PFDN5Q99471 154 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 SPXQ9BT56 116 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 WDR61Q9GZS3 305 aaKnown RBP3.13□□□□□ -1.91
ATXN3-239ENST00000556315 AGPAT4-IT1Q9H0P7 198 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 SH3BGRL3Q9H299 93 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 NPVFQ9HCQ7 196 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 KCNIP2Q9NS61 270 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 PSENENQ9NZ42 101 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 NAT8Q9UHE5 227 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 TP53TG3Q9ULZ0 132 aa3.13□□□□□ -1.91
ATXN3-239ENST00000556315 TRAV34A0A0B4J273 112 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 FNDC10F2Z333 226 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 TSTD3H0UI37 97 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 H3BTX0 84 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 SLC17A3O00476 420 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 PDE6DO43924 150 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 GCGP01275 180 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 TYMSP04818 313 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 METTL15P1P0C7V9 234 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 IGLC2P0DOY2 106 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 CRISP2P16562 243 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 RAB4BP61018 213 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 PKIAP61925 76 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 CCL20P78556 96 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 RPL19P84098 196 aaKnown RBP3.12□□□□□ -1.91
ATXN3-239ENST00000556315 ERCC8Q13216 396 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 TMEM241Q24JQ0 296 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 ZNF674Q2M3X9 581 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 LELP1Q5T871 98 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 KCNIP4Q6PIL6 250 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 NOTCH2NLQ7Z3S9 236 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 MRPL52Q86TS9 123 aaKnown RBP3.12□□□□□ -1.91
ATXN3-239ENST00000556315 CYB561D1Q8N8Q1 229 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 OR4C5Q8NGB2 326 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 OR10P1Q8NGE3 313 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 OR10G8Q8NGN5 311 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 ATP6V0E2Q8NHE4 81 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 ISOC2Q96AB3 205 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 MRPL53Q96EL3 112 aaKnown RBP3.12□□□□□ -1.91
ATXN3-239ENST00000556315 ACTR3CQ9C0K3 210 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-239ENST00000556315 SLC39A9Q9NUM3 307 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 ARL2-SNX15V9GYD0 113 aa3.12□□□□□ -1.91
ATXN3-239ENST00000556315 PKHD1L1Q86WI1 4243 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 TRAV8-1A0A0A6YYK1 113 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 TRAV4A0A0B4J268 109 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 LOC100131303A0A0U1RQF7 123 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 MAP1LC3B2A6NCE7 125 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms