RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 ATRAIDQ6UW56 229 aa8.36□□□□□ -1.07
SNX6-207ENST00000556303 NEXN-AS1Q8NBZ9 246 aa8.36□□□□□ -1.07
SNX6-207ENST00000556303 FRZBQ92765 325 aa8.36□□□□□ -1.07
SNX6-207ENST00000556303 AP1S3Q96PC3 154 aa8.36□□□□□ -1.07
SNX6-207ENST00000556303 DERL1Q9BUN8 251 aa8.36□□□□□ -1.07
SNX6-207ENST00000556303 KIF25-AS1Q9Y6Z4 181 aa8.36□□□□□ -1.07
SNX6-207ENST00000556303 F2Z2F3 143 aa8.35□□□□□ -1.07
SNX6-207ENST00000556303 BCL2P10415 239 aa8.35□□□□□ -1.07
SNX6-207ENST00000556303 GNG4P50150 75 aa8.35□□□□□ -1.07
SNX6-207ENST00000556303 Q8N3U1 123 aa8.35□□□□□ -1.07
SNX6-207ENST00000556303 Q8N976 141 aa8.35□□□□□ -1.07
SNX6-207ENST00000556303 VAX2Q9UIW0 290 aa8.35□□□□□ -1.07
SNX6-207ENST00000556303 F5H697 171 aa8.34□□□□□ -1.07
SNX6-207ENST00000556303 H7C1H1 209 aa8.34□□□□□ -1.07
SNX6-207ENST00000556303 IGLC6P0CF74 106 aa8.34□□□□□ -1.07
SNX6-207ENST00000556303 WDR73Q6P4I2 378 aa8.34□□□□□ -1.07
SNX6-207ENST00000556303 Q6ZNX1 250 aa8.34□□□□□ -1.07
SNX6-207ENST00000556303 FER1L6-AS1Q8NA97 138 aa8.34□□□□□ -1.07
SNX6-207ENST00000556303 OR2D3Q8NGH3 330 aa8.34□□□□□ -1.07
SNX6-207ENST00000556303 DNAJC30Q96LL9 226 aa8.34□□□□□ -1.07
SNX6-207ENST00000556303 MED9Q9NWA0 146 aa8.34□□□□□ -1.07
SNX6-207ENST00000556303 KLK12Q9UKR0 248 aa8.34□□□□□ -1.07
SNX6-207ENST00000556303 TMEM262E9PQX1 116 aa8.33□□□□□ -1.08
SNX6-207ENST00000556303 P01737 135 aa8.33□□□□□ -1.08
SNX6-207ENST00000556303 MYCBP2O75592 4640 aa8.33□□□□□ -1.08
SNX6-207ENST00000556303 HERC1Q15751 4861 aa8.32□□□□□ -1.08
SNX6-207ENST00000556303 IGKV2D-24A0A075B6R9 120 aa8.32□□□□□ -1.08
SNX6-207ENST00000556303 RAB19A4D1S5 217 aa8.32□□□□□ -1.08
SNX6-207ENST00000556303 FAM229AH3BQW9 127 aa8.32□□□□□ -1.08
SNX6-207ENST00000556303 J3QL48 77 aa8.32□□□□□ -1.08
SNX6-207ENST00000556303 C14orf177Q52M58 125 aa8.32□□□□□ -1.08
SNX6-207ENST00000556303 Q5VSD8 79 aa8.32□□□□□ -1.08
SNX6-207ENST00000556303 C9orf62Q8N4C0 152 aa8.32□□□□□ -1.08
SNX6-207ENST00000556303 UBE2WQ96B02 151 aa8.32□□□□□ -1.08
SNX6-207ENST00000556303 DMBT1Q9UGM3 2413 aaPredicted RBP8.32□□□□□ -1.08
SNX6-207ENST00000556303 TRBV20OR9-2A0A075B6H5 130 aa8.31□□□□□ -1.08
SNX6-207ENST00000556303 MUC21A0A0G2JKD1 596 aa8.31□□□□□ -1.08
SNX6-207ENST00000556303 MUC21A0A140T8X8 626 aa8.31□□□□□ -1.08
SNX6-207ENST00000556303 TRGC1P0CF51 173 aa8.31□□□□□ -1.08
SNX6-207ENST00000556303 WFDC2Q14508 124 aa8.31□□□□□ -1.08
SNX6-207ENST00000556303 Q6ZSA8 131 aa8.31□□□□□ -1.08
SNX6-207ENST00000556303 BAALCQ8WXS3 180 aa8.31□□□□□ -1.08
SNX6-207ENST00000556303 C1orf43Q9BWL3 253 aa8.31□□□□□ -1.08
SNX6-207ENST00000556303 TRBV25-1A0A075B6N4 114 aa8.3□□□□□ -1.08
SNX6-207ENST00000556303 M0QY20 66 aa8.3□□□□□ -1.08
SNX6-207ENST00000556303 CRPP02741 224 aa8.3□□□□□ -1.08
SNX6-207ENST00000556303 BLOC1S1P78537 153 aa8.3□□□□□ -1.08
SNX6-207ENST00000556303 MIAQ16674 131 aa8.3□□□□□ -1.08
SNX6-207ENST00000556303 IQCJQ1A5X6 159 aa8.3□□□□□ -1.08
SNX6-207ENST00000556303 AKAP14Q86UN6 197 aa8.3□□□□□ -1.08
SNX6-207ENST00000556303 CHCHD5Q9BSY4 110 aa8.3□□□□□ -1.08
SNX6-207ENST00000556303 TPPP3Q9BW30 176 aa8.3□□□□□ -1.08
SNX6-207ENST00000556303 CNFNQ9BYD5 112 aa8.3□□□□□ -1.08
SNX6-207ENST00000556303 TMEM250H0YL14 139 aa8.29□□□□□ -1.08
SNX6-207ENST00000556303 ANGP03950 147 aaKnown RBP8.29□□□□□ -1.08
SNX6-207ENST00000556303 INAFM2P0DMQ5 153 aa8.29□□□□□ -1.08
SNX6-207ENST00000556303 GZMBP10144 247 aa8.29□□□□□ -1.08
SNX6-207ENST00000556303 SSTP61278 116 aa8.29□□□□□ -1.08
SNX6-207ENST00000556303 MPV17L2Q567V2 206 aa8.29□□□□□ -1.08
SNX6-207ENST00000556303 LYZL1Q6UWQ5 148 aa8.29□□□□□ -1.08
SNX6-207ENST00000556303 ENHOQ6UWT2 76 aa8.29□□□□□ -1.08
SNX6-207ENST00000556303 NTM-AS1Q6ZSK4 140 aa8.29□□□□□ -1.08
SNX6-207ENST00000556303 NUDT10Q8NFP7 164 aa8.29□□□□□ -1.08
SNX6-207ENST00000556303 NUDT11Q96G61 164 aa8.29□□□□□ -1.08
SNX6-207ENST00000556303 DPH3P1Q9H4G8 78 aa8.29□□□□□ -1.08
SNX6-207ENST00000556303 IGHV1-24A0A0C4DH33 117 aa8.28□□□□□ -1.08
SNX6-207ENST00000556303 LECT2O14960 151 aa8.28□□□□□ -1.08
SNX6-207ENST00000556303 NDUFS6O75380 124 aaKnown RBP8.28□□□□□ -1.08
SNX6-207ENST00000556303 NTF3P20783 257 aa8.28□□□□□ -1.08
SNX6-207ENST00000556303 CTRLP40313 264 aa8.28□□□□□ -1.08
SNX6-207ENST00000556303 RASL11AQ6T310 242 aa8.28□□□□□ -1.08
SNX6-207ENST00000556303 C15orf54Q8N8G6 183 aa8.28□□□□□ -1.08
SNX6-207ENST00000556303 LYPD6BQ8NI32 183 aa8.28□□□□□ -1.08
SNX6-207ENST00000556303 PGLYRP4Q96LB8 373 aa8.28□□□□□ -1.08
SNX6-207ENST00000556303 PRR34Q9NV39 138 aa8.28□□□□□ -1.08
SNX6-207ENST00000556303 FAM30AQ9NZY2 134 aa8.28□□□□□ -1.08
SNX6-207ENST00000556303 FLG2Q5D862 2391 aaPredicted RBP8.28□□□□□ -1.08
SNX6-207ENST00000556303 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.27□□□□□ -1.09
SNX6-207ENST00000556303 A0A1B0GUV1 79 aa8.27□□□□□ -1.09
SNX6-207ENST00000556303 SMR3BP02814 79 aaPredicted RBP8.27□□□□□ -1.09
SNX6-207ENST00000556303 MGPP08493 103 aa8.27□□□□□ -1.09
SNX6-207ENST00000556303 SUMO4Q6EEV6 95 aa8.27□□□□□ -1.09
SNX6-207ENST00000556303 RPP21Q9H633 154 aaKnown RBP8.27□□□□□ -1.09
SNX6-207ENST00000556303 NIT2Q9NQR4 276 aa8.27□□□□□ -1.09
SNX6-207ENST00000556303 RBX1P62877 108 aa8.26□□□□□ -1.09
SNX6-207ENST00000556303 OCC1Q8TAD7 63 aa8.26□□□□□ -1.09
SNX6-207ENST00000556303 FAM231DQ6ZW35 169 aa8.25□□□□□ -1.09
SNX6-207ENST00000556303 TRAV8-4A0A0B4J246 113 aa8.24□□□□□ -1.09
SNX6-207ENST00000556303 K7EN84 100 aa8.24□□□□□ -1.09
SNX6-207ENST00000556303 PLA2G1BP04054 148 aaKnown RBP8.24□□□□□ -1.09
SNX6-207ENST00000556303 GAGE6Q13070 117 aa8.24□□□□□ -1.09
SNX6-207ENST00000556303 TWIST1Q15672 202 aa8.24□□□□□ -1.09
SNX6-207ENST00000556303 DGAT2L7PQ6IED9 249 aa8.24□□□□□ -1.09
SNX6-207ENST00000556303 TEX261Q6UWH6 196 aa8.24□□□□□ -1.09
SNX6-207ENST00000556303 ALKAL2Q6UX46 152 aa8.24□□□□□ -1.09
SNX6-207ENST00000556303 SMIM15Q7Z3B0 74 aa8.24□□□□□ -1.09
SNX6-207ENST00000556303 TMEM243Q9BU79 118 aa8.24□□□□□ -1.09
SNX6-207ENST00000556303 RNASE7Q9H1E1 156 aaKnown RBP8.24□□□□□ -1.09
SNX6-207ENST00000556303 A8MWL6 223 aa8.23□□□□□ -1.09
SNX6-207ENST00000556303 NKX2-5P52952 324 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms