RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 MEF2BQ02080 365 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-236ENST00000556220 PRR9Q5T870 116 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 EIF5AL1Q6IS14 154 aaKnown RBP4.37□□□□□ -1.71
ATXN3-236ENST00000556220 ZFAND2AQ8N6M9 145 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 RMI2Q96E14 147 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 MRPL53Q96EL3 112 aaKnown RBP4.37□□□□□ -1.71
ATXN3-236ENST00000556220 SPXQ9BT56 116 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 SEC11CQ9BY50 192 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 GTSF1LQ9H1H1 148 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 OR51M1Q9H341 326 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 SDF2L1Q9HCN8 221 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 TREM1Q9NP99 234 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 VAX2Q9UIW0 290 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 IGKV2-40A0A087WW87 121 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-236ENST00000556220 IGHV3-16A0A0C4DH30 117 aa4.36□□□□□ -1.71
ATXN3-236ENST00000556220 PHOX2AO14813 284 aa4.36□□□□□ -1.71
ATXN3-236ENST00000556220 OR7C2O60412 319 aa4.36□□□□□ -1.71
ATXN3-236ENST00000556220 IGKV2D-40P01614 121 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-236ENST00000556220 MBP02144 154 aa4.36□□□□□ -1.71
ATXN3-236ENST00000556220 NBEAP1P0C6P0 100 aa4.36□□□□□ -1.71
ATXN3-236ENST00000556220 ZNF80P51504 273 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-236ENST00000556220 KRTAP10-8P60410 259 aa4.36□□□□□ -1.71
ATXN3-236ENST00000556220 UBE2L3P68036 154 aaKnown RBP4.36□□□□□ -1.71
ATXN3-236ENST00000556220 DAZ4Q86SG3 579 aaKnown RBP4.36□□□□□ -1.71
ATXN3-236ENST00000556220 OCC1Q8TAD7 63 aa4.36□□□□□ -1.71
ATXN3-236ENST00000556220 DAZ3Q9NR90 486 aaKnown RBP4.36□□□□□ -1.71
ATXN3-236ENST00000556220 FSIP2Q5CZC0 6907 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 IGKV2D-24A0A075B6R9 120 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 A0A0J9YXV3 536 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 A0A0U1RQV1 116 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 A0A1W2PRE2 83 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 C7orf77A4D0Y5 90 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 COLCA2A8K830 154 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 ZNF253O75346 499 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 APOC3P02656 99 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 CXCL1P09341 107 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 HIST1H1EP10412 219 aaKnown RBP4.35□□□□□ -1.71
ATXN3-236ENST00000556220 S100A1P23297 94 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 RANP62826 216 aaKnown RBP4.35□□□□□ -1.71
ATXN3-236ENST00000556220 C14orf177Q52M58 125 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 PQLC2Q6ZP29 291 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 LINC01551Q86U37 167 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 SLC25A29Q8N8R3 303 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 PRADC1Q9BSG0 188 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 EIF5A2Q9GZV4 153 aaKnown RBP4.35□□□□□ -1.71
ATXN3-236ENST00000556220 KCNIP2Q9NS61 270 aa4.35□□□□□ -1.71
ATXN3-236ENST00000556220 A0A1W2PPV4 95 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 PGPA6NDG6 321 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 KRBOX1C9JBD0 128 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 F8W036 122 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 TMEM250H0YL14 139 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 PANO1I0J062 215 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 M0R2P5 195 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 TCRAP04437 139 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 RPL35P42766 123 aaKnown RBP4.34□□□□□ -1.71
ATXN3-236ENST00000556220 RHOHQ15669 191 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 TMEM183BQ1AE95 376 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 MUC21Q5SSG8 566 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 TMEM78Q5T7P6 136 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 TMEM183AQ8IXX5 376 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 OR10G8Q8NGN5 311 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 OR1L4Q8NGR5 311 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 Q8TAT8 98 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 ISOC2Q96AB3 205 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 DNAJC30Q96LL9 226 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 MANBALQ9NQG1 85 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 ZNF492Q9P255 531 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 PRELID1Q9Y255 219 aa4.34□□□□□ -1.71
ATXN3-236ENST00000556220 TRBV6-4A0A1B0GX49 114 aa4.33□□□□□ -1.72
ATXN3-236ENST00000556220 PEX7O00628 323 aa4.33□□□□□ -1.72
ATXN3-236ENST00000556220 NDUFS6O75380 124 aaKnown RBP4.33□□□□□ -1.72
ATXN3-236ENST00000556220 RAB31Q13636 194 aa4.33□□□□□ -1.72
ATXN3-236ENST00000556220 PEA15Q15121 130 aa4.33□□□□□ -1.72
ATXN3-236ENST00000556220 CENPWQ5EE01 88 aa4.33□□□□□ -1.72
ATXN3-236ENST00000556220 CST9LP1Q5W188 147 aa4.33□□□□□ -1.72
ATXN3-236ENST00000556220 SDIM1Q6ZPB5 146 aa4.33□□□□□ -1.72
ATXN3-236ENST00000556220 Q86TA4 180 aa4.33□□□□□ -1.72
ATXN3-236ENST00000556220 C9orf163Q8N9P6 203 aa4.33□□□□□ -1.72
ATXN3-236ENST00000556220 PFDN5Q99471 154 aa4.33□□□□□ -1.72
ATXN3-236ENST00000556220 EPDR1Q9UM22 224 aa4.33□□□□□ -1.72
ATXN3-236ENST00000556220 ARL2-SNX15V9GYD0 113 aa4.33□□□□□ -1.72
ATXN3-236ENST00000556220 V9GYV3 84 aa4.33□□□□□ -1.72
ATXN3-236ENST00000556220 IGLV5-39A0A0G2JS06 123 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 TRBV7-9A0A0J9YWB2 115 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 C19orf71A6NCJ1 209 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 FBLL1A6NHQ2 334 aaKnown RBP4.32□□□□□ -1.72
ATXN3-236ENST00000556220 USP17L23D6RBM5 183 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 CIDEAO60543 219 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 GCGP01275 180 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 LTAP01374 205 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 CEBPGP53567 150 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 RPL19P84098 196 aaKnown RBP4.32□□□□□ -1.72
ATXN3-236ENST00000556220 CIRBPQ14011 172 aaKnown RBP4.32□□□□□ -1.72
ATXN3-236ENST00000556220 ZNF674Q2M3X9 581 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 FAM159AQ6UWV7 190 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 GOLT1AQ6ZVE7 132 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 TMEM75Q8N9X5 138 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 HIST1H2BAQ96A08 127 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 UBE2WQ96B02 151 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms