RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 LSM5Q9Y4Y9 91 aaKnown RBP3.85□□□□□ -1.79
PRKCH-220ENST00000556164 V9GYH0 126 aa3.85□□□□□ -1.79
PRKCH-220ENST00000556164 FAM24AA6NFZ4 105 aa3.84□□□□□ -1.79
PRKCH-220ENST00000556164 M0R2P5 195 aa3.84□□□□□ -1.79
PRKCH-220ENST00000556164 SSNA1O43805 119 aa3.84□□□□□ -1.79
PRKCH-220ENST00000556164 ZNF266Q14584 549 aa3.84□□□□□ -1.79
PRKCH-220ENST00000556164 UFSP1Q6NVU6 142 aa3.84□□□□□ -1.79
PRKCH-220ENST00000556164 HIST1H4GQ99525 98 aa3.84□□□□□ -1.79
PRKCH-220ENST00000556164 SLC25A2Q9BXI2 301 aa3.84□□□□□ -1.79
PRKCH-220ENST00000556164 PARLQ9H300 379 aa3.84□□□□□ -1.79
PRKCH-220ENST00000556164 DNAH8Q96JB1 4490 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 LRP1Q07954 4544 aaKnown RBP3.83□□□□□ -1.8
PRKCH-220ENST00000556164 A0A1B0GV90 55 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 NAP1L6A6NFF2 107 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 SMIM1B2RUZ4 78 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 PFN1P07737 140 aaKnown RBP3.83□□□□□ -1.8
PRKCH-220ENST00000556164 OR10J4P0C629 311 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 PVALBP20472 110 aaPredicted RBP3.83□□□□□ -1.8
PRKCH-220ENST00000556164 CSN1S1P47710 185 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 SULT1A1P50225 295 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 S100A10P60903 97 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 RANP62826 216 aaKnown RBP3.83□□□□□ -1.8
PRKCH-220ENST00000556164 RPL32P62910 135 aaKnown RBP3.83□□□□□ -1.8
PRKCH-220ENST00000556164 HBG1P69891 147 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 HBG2P69892 147 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 LELP1Q5T871 98 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 Q6AWC8 147 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 Q6ZN92 141 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 MIR17HGQ75NE6 70 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 PHYHIPLQ96FC7 376 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 FAM167A-AS1Q96KT0 104 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 PGLYRP4Q96LB8 373 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 PRADC1Q9BSG0 188 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 PAXXQ9BUH6 204 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 HSPB11Q9Y547 144 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 ALG5Q9Y673 324 aa3.83□□□□□ -1.8
PRKCH-220ENST00000556164 TRAV8-3A0A0A6YYJ7 113 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 IGHV3-73A0A0B4J1V6 119 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 IGSF23A1L1A6 192 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 RBAKDNA6NC62 111 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 RBFOX3A6NFN3 312 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 GNRH2O43555 120 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 OR7C2O60412 319 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 S100A11P31949 105 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 PFN2P35080 140 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 KRTAP10-4P60372 401 aaPredicted RBP3.82□□□□□ -1.8
PRKCH-220ENST00000556164 RAB2AP61019 212 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 RHOHQ15669 191 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 CNPY1Q3B7I2 92 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 TDRG1Q3Y452 100 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 SLC25A29Q8N8R3 303 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 CHCHD10Q8WYQ3 142 aaPredicted RBP3.82□□□□□ -1.8
PRKCH-220ENST00000556164 FXYD5Q96DB9 178 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 CHAC1Q9BUX1 264 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 NPCDR1Q9BY65 106 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 C11orf1Q9H5F2 150 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 SDF2L1Q9HCN8 221 aa3.82□□□□□ -1.8
PRKCH-220ENST00000556164 LYRM2Q9NU23 88 aaPredicted RBP3.82□□□□□ -1.8
PRKCH-220ENST00000556164 F6UZH7 168 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 DLEU1O43261 78 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 IGLV2-8P01709 118 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 TYMSP04818 313 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 BTCP35070 178 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 DAZ4Q86SG3 579 aaKnown RBP3.81□□□□□ -1.8
PRKCH-220ENST00000556164 TMEM252Q8N6L7 170 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 NRACQ8N912 160 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 ATP6V0E2Q8NHE4 81 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 CIRBP-AS1Q8TBR5 109 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 C2orf50Q96LR7 162 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 HYLS1Q96M11 299 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 OCR1Q9BZK8 76 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 GTSF1LQ9H1H1 148 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 BIN3Q9NQY0 253 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 DAZ3Q9NR90 486 aaKnown RBP3.81□□□□□ -1.8
PRKCH-220ENST00000556164 LENEPQ9Y5L5 61 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 HMCN2Q8NDA2 5059 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 FAT3Q8TDW7 4589 aa3.81□□□□□ -1.8
PRKCH-220ENST00000556164 UBR4Q5T4S7 5183 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 IGKV2D-24A0A075B6R9 120 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 TRAV21A0A0B4J279 112 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 TRBV6-4A0A1B0GX49 114 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 CCDC160A6NGH7 325 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 GGTLC3B5MD39 225 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 RPL37AP61513 92 aaKnown RBP3.8□□□□□ -1.8
PRKCH-220ENST00000556164 UBE2L3P68036 154 aaKnown RBP3.8□□□□□ -1.8
PRKCH-220ENST00000556164 ACOT6Q3I5F7 207 aaPredicted RBP3.8□□□□□ -1.8
PRKCH-220ENST00000556164 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 ZNF876PQ49A33 203 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 DNLZQ5SXM8 178 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 CFAP126Q5VTH2 177 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 Q6ZRP5 223 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 NOTCH2NLQ7Z3S9 236 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 FAM19A5Q7Z5A7 132 aaPredicted RBP3.8□□□□□ -1.8
PRKCH-220ENST00000556164 NIT1Q86X76 327 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 Q8N976 141 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 CMTM2Q8TAZ6 248 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 ASB13Q8WXK3 278 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 RMI2Q96E14 147 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
PRKCH-220ENST00000556164 KCNS1Q96KK3 526 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms